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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000390_pilon:62236..64087+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011135 ID=XLOC_011135|Name=XLOC_011135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1852bp|location=Sequence derived from alignment at sc0000390_pilon:62236..64087+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGTCGCACGACGAAGATGGACTCCCTTTATTGATACACGTGCGAGAAAA
CAATGACAAACTCTTTACCGCCTTCCTGGCGTCAGTCATCGCGTCTCTGG
CTTCATTGAACTTTGGTTACGCTCTTGGCTACTCTTCACCAACGCAAAAA
CAAATGTCTCCAGATCCGCTGGATAAAGATCAATTCTCATGGTTCAGCGT
AAATCTTTTTCGACTTAAATCAATGATAGTATTTTATCATGGCATTCACT
TTTCGAATCATTATTTCTGTTTAAAGCTGCAAAGGAAGGAATCATAGCAT
TGACATTATTCTTTCTCCTTTCAGTCAATTGTTGCACTGGGAGCCATAGT
GGGAAGTTGGATTGGCGCTTATATGGTGGATAAGTTAGGAAGGAAGATGT
CCATCATGTTGAGCGCCTTCTTCTACGTGCCAGGCTGGTGTTTGATAGCG
TATGGTAACAGTGTGGGTATGTTGTATGTGGGTCGCATCATCAGTGGTAT
GGCTGTCGGTATATCTGCTCTTTCTGTCCCCGTAAGTAAGAACTTATCTg
aacttttcttaattttcaaatATCATCTCACAAACTGAAAGATCTCATAC
ATTCCCAGTACTAATTAAATTGCCTGATTTTACACTTTAATCTTCAATCT
TTACACTTTAATTTTCGGGCAGATGTACATTTCGGAGATTGCATCATCAC
GATACAGGGGTGGATTGAGTTGCATCAACCAGTTGTTCATCACATTTGGT
GACGTGGTGGTGTACTCCATCGGTGCCATCCACGCAGTAAAGTGGCAATG
GTTGGCTATCATCCCCGTCATCATTGCAACCATAGCTATTCTACTCATGT
CCTTCATGCCAGAAACACCTGTCTGGCTGCTTGCCAATCATAAGAAAGGT
GAAGCACTTCGAACGCTGGTCTGGTTGAGAGGTTCTTCTTACGATTGTGC
ATCTGAATTGAACGATCTTCAACTCAACCTTGGTAAGAAATTCCTTCTTC
ATCCTTACCAATGTCTTTTCGTCAATCAATAAGAATAATATTGAAAGCAT
AGCCATGTGACATTTTCGCCTTCCAAGACGTTGAAAATAAGTCCAAAACT
CATCTATTCATTCTCTTCTCGTTGTagaaacacaagaaaaaatatCGTTG
AGAGCATTTTTTAGTCCAGTTTTGTATCGACCCTTGATCATTGGATGTAT
GATGATGGTTTTCCAGCAGATGGTTGGTATCAATGCCATTCTCTTCTTCT
GTGATAAAGTCTTCACTCAAGCCGGTATCTCCTGGGATGAATATGCATCC
ATTGCTGCTATCTGTGTCCTTTTCGCCTTCACCGTCGTCTCCTGCTTGAC
AGTGGATCGTCTTGGAAGACGTATACTTCTGTTGATTGGTAGTGTCGTTA
TGTTCGTTTGTATGTTTTTGTTGGGTGTGTATTATGACTTGGCCGATATC
TCTGGCAATTCCCCTGGCAATTCCCTCAGAATCTTTGGTCATAAATCTCA
CACCATCCCTGTATCGCACATTTCGTGGTTGGCCTTACTGTCTGTTTTCC
TGTATCTTGCATTGTTTGCCATCGGTTGGGGCCCGTTACCATGGGTACTG
ATGGGTGAATTGTTTCCACCACGTGCTCGTAGTCAAGCAAGCAGTATGGT
AACCATGGTGAACCTCATTTTCACTTTTATCGTTGGAAAAACTTTTGCTT
CTTTCACTGATGTATTTAAACCACAAGGCACCTTTTGGTTTTATTCAGGA
TTCTGTATTTTAAGCTTCCTGTACACCATGTTTTTCGTACCAGAAACGAA
AGGCAAAACTTTGATGGAAATCGAACGTATATTTGCCACATCAACACAAT
AG Coding sequence (CDS) from alignment at sc0000390_pilon:62236..64087+ >XLOC_011135 ID=XLOC_011135|Name=XLOC_011135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2880bp|location=Sequence derived from alignment at sc0000390_pilon:62236..64087+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGTCGCACGACGAAGATGGACTCCCTTTATTGATACACGTGCGAGAAAA
CAATGACAAACTCTTTACCGCCTTCCTGGCGTCAGTCATCGCGTCTCTGG
CTTCATTGAACTTTGGTTACGCTCTTGGCTACTCTTCACCAACGCAAAAA
CAAATGTCTCCAGATCCGCTGGATAAAGATCAATTCTCATGGTTCAGCaT
GTCGCACGACGAAGATGGACTCCCTTTATTGATACACGTGCGAGAAAACA
ATGACAAACTCTTTACCGCCTTCCTGGCGTCAGTCATCGCGTCTCTGGCT
TCATTGAACTTTGGTTACGCTCTTGGCTACTCTTCACCAACGCAAAAACA
AATGTCTCCAGATCCGCTGGATAAAGATCAATTCTCATGGTTCAGCTCAA
TTGTTGCACTGGGAGCCATAGTGGGAAGTTGGATTGGCGCTTATATGGTG
GATAAGTTAGGAAGGAAGATGTCCATCATGTTGAGCGCCTTCTTCTACGT
GCCAGGCTGGTGTTTGATAGCGTATGGTAACAGTGTGGGTATGTTGTATG
TGGGTCGCATCATCAGTGGTATGGCTGTCGGTATATCTGCTCTTTCTGTC
CCCTCAATTGTTGCACTGGGAGCCATAGTGGGAAGTTGGATTGGCGCTTA
TATGGTGGATAAGTTAGGAAGGAAGATGTCCATCATGTTGAGCGCCTTCT
TCTACGTGCCAGGCTGGTGTTTGATAGCGTATGGTAACAGTGTGGGTATG
TTGTATGTGGGTCGCATCATCAGTGGTATGGCTGTCGGTATATCTGCTCT
TTCTGTCCCCATGTACATTTCGGAGATTGCATCATCACGATACAGGGGTG
GATTGAGTTGCATCAACCAGTTGTTCATCACATTTGGTGACGTGGTGGTG
TACTCCATCGGTGCCATCCACGCAGTAAAGTGGCAATGGTTGGCTATCAT
CCCCGTCATCATTGCAACCATAGCTATTCTACTCATGTCCTTCATGCCAG
AAACACCTGTCTGGCTGCTTGCCAATCATAAGAAAGGTGAAGCACTTCGA
ACGCTGGTCTGGTTGAGAGGTTCTTCTTACGATTGTGCATCTGAATTGAA
CGATCTTCAACTCAACCTTGATGTACATTTCGGAGATTGCATCATCACGA
TACAGGGGTGGATTGAGTTGCATCAACCAGTTGTTCATCACATTTGGTGA
CGTGGTGGTGTACTCCATCGGTGCCATCCACGCAGTAAAGTGGCAATGGT
TGGCTATCATCCCCGTCATCATTGCAACCATAGCTATTCTACTCATGTCC
TTCATGCCAGAAACACCTGTCTGGCTGCTTGCCAATCATAAGAAAGGTGA
AGCACTTCGAACGCTGGTCTGGTTGAGAGGTTCTTCTTACGATTGTGCAT
CTGAATTGAACGATCTTCAACTCAACCTTGaaacacaagaaaaaatatCG
TTGAGAGCATTTTTTAGTCCAGTTTTGTATCGACCCTTGATCATTGGATG
TATGATGATGGTTTTCCAGCAGATGGTTGGTATCAATGCCATTCTCTTCT
TCTGTGATAAAGTCTTCACTCAAGCCGGTATCTCCTGGGATGAATATGCA
TCCATTGCTGCTATCTGTGTCCTTTTCGCCTTCACCGTCGTCTCCTGCTT
GACAGTGGATCGTCTTGGAAGACGTATACTTCTGTTGATTGGTAGTGTCG
TTATGTTCGTTTGTATGTTTTTGTTGGGTGTGTATTATGACTTGGCCGAT
ATCTCTGGCAATTCCCCTGGCAATTCCCTCAGAATCTTTGGTCATAAATC
TCACACCATCCCTGTATCGCACATTTCGTGGTTGGCCTTACTGTCTGTTT
TCCTGTATCTTGCATTGTTTGCCATCGGTTGGGGCCCGTTACCATGGGTA
CTGATGGGTGAATTGTTTCCACCACGTGCTCGTAGTCAAGCAAGCAGTAT
GGTAACCATGGTGAACCTCATTTTCACTTTTATCGTTGGAAAAACTTTTG
CTTCTTTCACTGATGTATTTAAACCACAAGGCACCTTTTGGTTTTATTCA
GGATTCTGTATTTTAAGCTTCCTGTACACCATGTTTTTCGTACCAGAAAC
GAAAGGCAAAACTTTGATGGAAATCGAACGTATATTTGCCACATCAACAC
AATAGaaacacaagaaaaaatatCGTTGAGAGCATTTTTTAGTCCAGTTT
TGTATCGACCCTTGATCATTGGATGTATGATGATGGTTTTCCAGCAGATG
GTTGGTATCAATGCCATTCTCTTCTTCTGTGATAAAGTCTTCACTCAAGC
CGGTATCTCCTGGGATGAATATGCATCCATTGCTGCTATCTGTGTCCTTT
TCGCCTTCACCGTCGTCTCCTGCTTGACAGTGGATCGTCTTGGAAGACGT
ATACTTCTGTTGATTGGTAGTGTCGTTATGTTCGTTTGTATGTTTTTGTT
GGGTGTGTATTATGACTTGGCCGATATCTCTGGCAATTCCCCTGGCAATT
CCCTCAGAATCTTTGGTCATAAATCTCACACCATCCCTGTATCGCACATT
TCGTGGTTGGCCTTACTGTCTGTTTTCCTGTATCTTGCATTGTTTGCCAT
CGGTTGGGGCCCGTTACCATGGGTACTGATGGGTGAATTGTTTCCACCAC
GTGCTCGTAGTCAAGCAAGCAGTATGGTAACCATGGTGAACCTCATTTTC
ACTTTTATCGTTGGAAAAACTTTTGCTTCTTTCACTGATGTATTTAAACC
ACAAGGCACCTTTTGGTTTTATTCAGGATTCTGTATTTTAAGCTTCCTGT
ACACCATGTTTTTCGTACCAGAAACGAAAGGCAAAACTTTGATGGAAATC
GAACGTATATTTGCCACATCAACACAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000390_pilon | genome | sc0000390_pilon:62236..64087 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1036-1428:1460 |
| Aaloc | 718-1035:1130 |
| Aaloc | 406-714:673 |
| Aaloc | 199-405:325 |
| Aaloc | 1-198:1 |
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