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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000390_pilon:72994..75236+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011133 ID=XLOC_011133|Name=XLOC_011133|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2243bp|location=Sequence derived from alignment at sc0000390_pilon:72994..75236+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTTCCATTTCGTTGGTCAACAAGTTGGAAGTGGATTACAAAGGCAG
TTTGTTCAAAAGCGCTATTTGTCTGGTGGATATTGACGAGGATGGTTTGA
ACGAACTGTGTGTTGGCTTCACTAATGGTGAACTTCATGCTTACAAAGGT
ATTCATCCACTTTCATCGCAACTAGAAGATCTCACTCACAGTTGATCTTC
TGGTCATTCTTGTGAGAATTGATAAATAATGATGTAAAGTATAAcatatt
tcacttttatttgCTAGGCTTGGACACGACAAAGCCATGGAAGTTGAGCA
AAGGGTTAGGATCATTGGTTGTGTTGTGCGGAGGACATGTTCGAAGCAAA
GATGAAACGTTACTTTGTGCATTAGATTCTGAAGGGAGGTGTAATCTGTT
TGACGTCAAAGAAGAACACGTGACATCTGACCATGATGGATCGTGCGTTG
TGAGTTTACTTCTTCTCATGTTCTAAAACGTCATCGGCCAAATTTCATTA
CTCATATTCAGccacaatatagtcattttttgtAATCACTTAGAACTTTT
ATTGAGCTGTCGCACTTTTTCTAAAGGGTAGTCCACCATCTGGCGCTCCA
ACCTGTTCGCCAACAGAAGAAATGCGTTTGGTGCACAAAGAACACCTTCC
GCCCAACGCCAAGGTGGCCATCCTGGAAGATGTGGACAATGATGGAGTGG
CGGAGCTGATCATCGGCTATACTGATCGTTATGTTCGCATCTATAAGTGG
ACCGTTCAAGGAGGTTTGTTCGTTAGTCATCCAGCTGGTTATTAGCTTGA
TGCTTTATCATTTCACGTTACTCCTCATGTCAAGTTGCTAGTTACAGGGA
AATCACCCTAATTAGCTAACACTTCACGGATTTTCTTCCGCACAATCAAT
CGTTCGTGTAGGCGAGGGGAttttttttAAGTTCTTTATAAATTCTGTGT
TACTTTGTACGATTAGGCGTCCCACTGCCTATTATTGtctcttttttact
ttttctgtaGATCCCTTGGATGACGTCGAGAAAAAGCTGACCAAACAAAA
CACTGAAGAAACGGACAAAAAATCCACTCTGTCTTTTTCACTCTCGTTAT
CGAAAGAAGCCAAACACCTTTCGCCTGCACCACGACAAAAGAGTGCTGAG
ACTGCAGAAGAAGGTACCATTAACAACAATAACAGCACGCCTTATCACCC
AGTTGGTTCGTTTGTACTCCTCAAGCAATTCTCTTTGATCGGACAGATCG
GCTCATTGGCTGTGTGCACCACTGTGGAAGGATTGAACCAATTGATCGTG
TCACAACCAAACGGTGGATATTGCATCTTGGGCCAGTACGATGAAGATGG
CTTCACCGAAAACATCGTGCGTTTGTATTTACTTTCTGTCTGTATAACCC
TCCTATTGAGTCTATTGAGTTTAAAATTGAGAGAGGAGAAAGTGAACAGT
CAAAGCTTCTCAGTTTGCAAGCTTGTACTTGATACATACCATGCATATAA
CAAGCTAATTTTACCCGTCAGATTCAAAGCGTTCAactgatttgttttgt
ttttgtttctagAGCACGCCAACTAGCGTGGAAGCGCCGTCGCCAAGCAA
CCAAGACTCTTACCCGATCTTCTACCCGATCACAGCATACGGTAATCGTT
CTTTCCAACAACAACACATCAACACAGAAATCATCGGAGGTATTCGGCGA
CAGAAGGGAGCTACAGGCGTTATAGGGCTTGCAACGCATGATGGTTATTT
CATTATTCTTGATAATACATATTTCTCTGGTCAAAACCCAGTTAAAAATT
CCTCTAAAAACAATTGGTTCGCTATGTCCAAAGTTGACGTCACAAATGAC
GGTGATGACGAAATCGTTTTGTGTGACCTGAACGGTATGACGTACATCAT
CGATAAAGAACGAAATATTGTAAGTTATAATTTCAATGAGAACGTCGCTG
CTTTTTGTGCTGGTTACTATGGAAATAAAGGACGCTCTACGCCATGTCTG
TGTTACGTCACTTTGAGTGGAAAGATTCATTTATATTACGATGTTTGGAT
CGACGCCATCAAAGTGCGTTGTGTGCATGCTGCTCTCATTGAGAAGATCA
AGAGGAAACCGGAGCTGCATTATCTGTTGGAACTTTTGCGTGGTGAGAGC
GGTGAAGTGGACCATGAAAAACTGCAGTCACTTGTTAAGCAATCTGCTTC
TCTCAATCGCTTCTCATCCTCGCTTTTTACCAAGAATAGATAA Coding sequence (CDS) from alignment at sc0000390_pilon:72994..75236+ >XLOC_011133 ID=XLOC_011133|Name=XLOC_011133|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3108bp|location=Sequence derived from alignment at sc0000390_pilon:72994..75236+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTTCCATTTCGTTGGTCAACAAGTTGGAAGTGGATTACAAAGGCAG
TTTGTTCAAAAGCGCTATTTGTCTGGTGGATATTGACGAGGATGGTTTGA
ACGAACTGTGTGTTGGCTTCACTAATGGTGAACTTCATGCTTACAAAGAT
GCGTTCCATTTCGTTGGTCAACAAGTTGGAAGTGGATTACAAAGGCAGTT
TGTTCAAAAGCGCTATTTGTCTGGTGGATATTGACGAGGATGGTTTGAAC
GAACTGTGTGTTGGCTTCACTAATGGTGAACTTCATGCTTACAAAGGCTT
GGACACGACAAAGCCATGGAAGTTGAGCAAAGGGTTAGGATCATTGGTTG
TGTTGTGCGGAGGACATGTTCGAAGCAAAGATGAAACGTTACTTTGTGCA
TTAGATTCTGAAGGGAGGTGTAATCTGTTTGACGTCAAAGAAGAACACGT
GACATCTGACCATGATGGATCGTGCGTTGCTTGGACACGACAAAGCCATG
GAAGTTGAGCAAAGGGTTAGGATCATTGGTTGTGTTGTGCGGAGGACATG
TTCGAAGCAAAGATGAAACGTTACTTTGTGCATTAGATTCTGAAGGGAGG
TGTAATCTGTTTGACGTCAAAGAAGAACACGTGACATCTGACCATGATGG
ATCGTGCGTTGGTAGTCCACCATCTGGCGCTCCAACCTGTTCGCCAACAG
AAGAAATGCGTTTGGTGCACAAAGAACACCTTCCGCCCAACGCCAAGGTG
GCCATCCTGGAAGATGTGGACAATGATGGAGTGGCGGAGCTGATCATCGG
CTATACTGATCGTTATGTTCGCATCTATAAGTGGACCGTTCAAGGAGGGT
AGTCCACCATCTGGCGCTCCAACCTGTTCGCCAACAGAAGAAATGCGTTT
GGTGCACAAAGAACACCTTCCGCCCAACGCCAAGGTGGCCATCCTGGAAG
ATGTGGACAATGATGGAGTGGCGGAGCTGATCATCGGCTATACTGATCGT
TATGTTCGCATCTATAAGTGGACCGTTCAAGGAGATCCCTTGGATGACGT
CGAGAAAAAGCTGACCAAACAAAACACTGAAGAAACGGACAAAAAATCCA
CTCTGTCTTTTTCACTCTCGTTATCGAAAGAAGCCAAACACCTTTCGCCT
GCACCACGACAAAAGAGTGCTGAGACTGCAGAAGAAGGTACCATTAACAA
CAATAACAGCACGCCTTATCACCCAGTTGGTTCGTTTGTACTCCTCAAGC
AATTCTCTTTGATCGGACAGATCGGCTCATTGGCTGTGTGCACCACTGTG
GAAGGATTGAACCAATTGATCGTGTCACAACCAAACGGTGGATATTGCAT
CTTGGGCCAGTACGATGAAGATGGCTTCACCGAAAACATCATCCCTTGGA
TGACGTCGAGAAAAAGCTGACCAAACAAAACACTGAAGAAACGGACAAAA
AATCCACTCTGTCTTTTTCACTCTCGTTATCGAAAGAAGCCAAACACCTT
TCGCCTGCACCACGACAAAAGAGTGCTGAGACTGCAGAAGAAGGTACCAT
TAACAACAATAACAGCACGCCTTATCACCCAGTTGGTTCGTTTGTACTCC
TCAAGCAATTCTCTTTGATCGGACAGATCGGCTCATTGGCTGTGTGCACC
ACTGTGGAAGGATTGAACCAATTGATCGTGTCACAACCAAACGGTGGATA
TTGCATCTTGGGCCAGTACGATGAAGATGGCTTCACCGAAAACATCAGCA
CGCCAACTAGCGTGGAAGCGCCGTCGCCAAGCAACCAAGACTCTTACCCG
ATCTTCTACCCGATCACAGCATACGGTAATCGTTCTTTCCAACAACAACA
CATCAACACAGAAATCATCGGAGGTATTCGGCGACAGAAGGGAGCTACAG
GCGTTATAGGGCTTGCAACGCATGATGGTTATTTCATTATTCTTGATAAT
ACATATTTCTCTGGTCAAAACCCAGTTAAAAATTCCTCTAAAAACAATTG
GTTCGCTATGTCCAAAGTTGACGTCACAAATGACGGTGATGACGAAATCG
TTTTGTGTGACCTGAACGGTATGACGTACATCATCGATAAAGAACGAAAT
ATTGTAAGTTATAATTTCAATGAGAACGTCGCTGCTTTTTGTGCTGGTTA
CTATGGAAATAAAGGACGCTCTACGCCATGTCTGTGTTACGTCACTTTGA
GTGGAAAGATTCATTTATATTACGATGTTTGGATCGACGCCATCAAAGTG
CGTTGTGTGCATGCTGCTCTCATTGAGAAGATCAAGAGGAAACCGGAGCT
GCATTATCTGTTGGAACTTTTGCGTGGTGAGAGCGGTGAAGTGGACCATG
AAAAACTGCAGTCACTTGTTAAGCAATCTGCTTCTCTCAATCGCTTCTCA
TCCTCGCTTTTTACCAAGAATAGATAAAGCACGCCAACTAGCGTGGAAGC
GCCGTCGCCAAGCAACCAAGACTCTTACCCGATCTTCTACCCGATCACAG
CATACGGTAATCGTTCTTTCCAACAACAACACATCAACACAGAAATCATC
GGAGGTATTCGGCGACAGAAGGGAGCTACAGGCGTTATAGGGCTTGCAAC
GCATGATGGTTATTTCATTATTCTTGATAATACATATTTCTCTGGTCAAA
ACCCAGTTAAAAATTCCTCTAAAAACAATTGGTTCGCTATGTCCAAAGTT
GACGTCACAAATGACGGTGATGACGAAATCGTTTTGTGTGACCTGAACGG
TATGACGTACATCATCGATAAAGAACGAAATATTGTAAGTTATAATTTCA
ATGAGAACGTCGCTGCTTTTTGTGCTGGTTACTATGGAAATAAAGGACGC
TCTACGCCATGTCTGTGTTACGTCACTTTGAGTGGAAAGATTCATTTATA
TTACGATGTTTGGATCGACGCCATCAAAGTGCGTTGTGTGCATGCTGCTC
TCATTGAGAAGATCAAGAGGAAACCGGAGCTGCATTATCTGTTGGAACTT
TTGCGTGGTGAGAGCGGTGAAGTGGACCATGAAAAACTGCAGTCACTTGT
TAAGCAATCTGCTTCTCTCAATCGCTTCTCATCCTCGCTTTTTACCAAGA
ATAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000390_pilon | genome | sc0000390_pilon:72994..75236 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 874-1554:1563 |
| Aaloc | 520-873:1013 |
| Aaloc | 331-516:577 |
| Aaloc | 151-330:270 |
| Aaloc | 1-147:1 |
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