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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1240441..1244720+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010905 ID=XLOC_010905|Name=XLOC_010905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4280bp|location=Sequence derived from alignment at sc0000063_pilon:1240441..1244720+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATGTAGTTCAAAGGATTGCACCTTCATACACTTTTTCCAAACAACAGG
TGAGACTTAAACTTCAATAAATACAGTAGATATAAAGATTACTTTTCTTT
CACCCTAAactagctggcacacaacgttgtttcaacgttcatctaacgtt
atatggacgttgtgaacgttagataagcgtcgaaaaaacgttgtgtgcca
actgggaaggtagctaattcgaaaaaaatctaAGGTTCTTGGAGGTCTAG
TCTGTGGTCCGGTCCGTGGAGGATGTCAACTATTATTTTAGGTCTCTTTA
TAAGCCATTTGGTGGTTAAGCCTTGAAAAGACTTCTTCTCATTCATGAGA
AAACTTTCCTAATGTCACTTGATTGGAGGTTATGAGACTAAGCTGTGTTA
CTTTAAAATATATGATTTTCGAAATAATGATCATATCgttgttaaccctt
taagtgccgatgtcgtatatatacgacatgggctatataggagggcgaag
ccctcctgtaatgcccagtttgagttagaaatcgttatttttggtcgaac
tcgtaggaattagattgtcctttatggtcaagcaaaaaaaaattcaaaag
tgagtctttccagcgaaattttaagcaaaaaagtcaaaaaaatgcaaaaa
attgacaaaaattcacttttttgggattctgaccgttttttgactatttt
tggtcaacgagtgatccaagaacctccaaatttggccctgttttacttta
ttctgtcttctagtgaattgatttgaaattttaccactgggcaccttttc
atcagttcagcaggtccgcgcagcgggcctgactgctttaattccctaac
ctacccccccccccccttggccgccgcccacaacgccttcctaaatcggg
cggcgccgaaggcgcccaaaagaaagaagagactctaagctatccaacga
gctatatacgagcttctaattccttctagatcaggagatataagccctta
aagtttgaactagcgatttttttaaaaaaacttagaaaaaaggaccctgg
cacttaaagggttaaagaaaaattgcaaaaagaatttttttttttagatt
tctcaatttttggcctaaactcactcaaaaatgctgaaaaacaccaaaaa
atcacattttcaaaatttttttttcactttgtttaataATAAGTGATAAA
ACTCATTCCACTTAGGTTCTAACAACTATGAAATAGATCCCTGTCTCGCC
AAAAAAGAACGACTCTTTATCATTGATAGAGACAACCATGGCTTAAAAAT
GAAACCCTGTCTCGAGTAAAAGACAGTTCTGTATCACTGGGaaaaaaaaC
ATGTCTTGGAGATATAACCCTGTCTCACTGAAAGGACAACTCTGTTTCAC
TGAAAGGACAACATTGTCTCACTGAACGGACAACTTTGTCTCACTGAAAG
GACAATTTTGTCTCACTGAAAGAACAACTCTGTTTCACTGAAAAGACAGC
TCTGCCTCACTGAAAGGACAAATCTGTCTCACTGAAAGGACAACTTTGTC
TCACTGAAAGGACAACTCTGTTTCACTGAAAAGACAGCTCTGTTTCACTG
AAAGGACAAGTTTCACTAAAAGGACAAGTCTCACTGAAAGGACAGCTCTG
TCCCACTGAAAAGACAACTCATCTCACTAGGGCAACTCTGTCTCACTGAA
AAGAAAACTCTATCCCACTGAAAAGACAGCTCTGTCTCACTGAAAGGACA
AGTCTCACTGAAAGGACaagtccccgggggggggggggtacttaggcaaa
atgggtgccgggtatgtgcgagccataagggtaccttttctcattcctca
aaagtctctcaaaggggtacaaattcaaaagtaagtctctgaaagggtcc
caaaatcacgaaaatcaaaaatttctctctcaaaggctcacgatttccaa
aaattttgaccaaaattaggtgacaatcaaaccaaaatttggaaaaaatg
aaccaaaatttaggaaaaagtctctcaaagggtcccaaaatcaccaaaat
tttgtctctcaaagggtcgattttcgattttcggctcggacatacccgtc
acctcgcaaacctagtaccccccccccggggacaaGTCTCACTGAAAAGA
CAACTCTGTCTCACTGAAAGGACAACTCTGTCCCACTGAAAGGAAAAGTC
TCACTGAAAGGACAACTCGTCTCACTAGGGCAACTCTGTCTCACTGAAAA
GAAAACTCTACAACTCGACTCACTAGGACAACTCTGTTTCACTGAAAAGA
CAGCTCTGTCTCAATGAATGGACAAGTTTCACTAAAAGGACAAGTCTCAC
TGAAAGGACAACTCTGTCTCACTGAAATGACAACTTTGTCTCACTGAAAG
GACAACTCTGTTTCACTGAAAGGACAACTCTGTTTCACTGAAAAGACAGC
TCTGTCTCACTGAAAGGACACTCTTCCCCATCCAAGAGACTGCCCTGTCT
CATTGTCATAAAAACAAGCCTGTCTCACTGAACGTTAAGCATGTCTCAAA
AAACAACCCTGTTTCTTTGGAGAGATAACCCTGACTCATaaaaaaaCCTT
CTTTTATCTATATAACTGAAGATACGACCCTGTGTTATGAAGAAGACAAT
CCTCTCCCACTAAATCAACAGTGATCtatcaaaaatgtaaaaattaggCC
CTAGGAAATCCAAAGTAAGTATCAACCTGTTAAGCTATCCCAGAGGAGgg
ggtactctcgggtacctaatagcggccccccccgctaattaatttttcga
aaattttccgccCAGGACATTcgtattccaacccccccgcttataaaatt
ttgagattttttccaacccccctgcttattccaatccccacggctattag
gtacccgagagtacttagGATGCAAGCTCACAAGTACTGCTCTAATTtag
accctcggacccttaccaggactaaaattgttttcaattcactaactatt
tttgattttacagaGTTTGAAATGATTCGACTTGGTTTCATTGCTGGTTG
TGTATTGGCGATTCTCAGTGTCCTTGTGGCCCTGATTCAAGCCTTTGTAC
AGAGAACCCTGACATTCCCAATAGTTACTTTGCAGATATGTTCAGGTAAG
TGTTATCTcagctggcaaacaacgttgtttcaacgctaatctaacgttaa
atggacgttgtaaacattagattaacgttgaaacaacgttctgtgccagc
tgggatgttGAGCGGTGAAAAAGAAAGTggatattatattttgattcttc
ccgacatgtttcgggCTCGGTCCGTTCTCTCaagggaatgatatttctat
agaaaaaaaaagtgtttttatacaaaaattatttgacgtcgATTTGGACA
AATACGTCACTTTAGGCGATTTCGGCTTGAAAATAGATTGGTGTAAATGG
GGCCATCTGATAAGTTGAATTTGGTCTGAAATGAATGTGTAGATCAGACT
TAATTAGTGTTATATTATCAACGAACCAGAGGCCACAGCACCACTTATAA
GTGATAGCCATGACATAGTGACTAAGTAGGCGCCGCCATGAATGGCGGCG
ATGgccgaaattttttaattttaacccTTCTAGACAGgtctttttaaagg
tttttaacagcattgctttgaaaaaatgtggtcaGGTCAGGGCCCAACAG
GCCCCTCGCTCCTGCGGGGCCTGCAAACTCAGAGTTTGCTGATGATCAGc
atcttctaacattacattaCGGACCCAACAGGTGATTGGTTTCAAGTGAC
ATATCGACTAATTTTaagtcacttacaaccaatcagcttttgggcccgtg
atgtaatgtcagaagacattgtagTGAAGAATATCGCATGGACGATCTGA
ACTAGTTCGAGTGCTGTTGGCCTCGATGTTGGCCTTTTTATTAGTTTAGC
CTCAGAATTTTAACCATCTTCAACGTGTTCACCGTatcgaaaactgtcaa
aaaagttttgtcaaGCCGAACATTAGCGGTCTCTTGATCgccaaaaacga
aatcaaaaagGGCctaaatttaattaattttcataattattgtTTTTCCA
GTCTTGTTATGCATTGGTTGCTTATCATACTTCACATATCtttcacgtga
ccgaaaaatgaATATGAGAACACAATGGAGTTATATCATTGGTTGGATTG
GTGCAGGCGTTGTAATGATGTCATTATTAATATTATTGGTTATATCAAAT
CGTAAAAAATCGAGTCCCACTCTTTATTAG Coding sequence (CDS) from alignment at sc0000063_pilon:1240441..1244720+ >XLOC_010905 ID=XLOC_010905|Name=XLOC_010905|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000063_pilon:1240441..1244720+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATGTAGTTCAAAGGATTGCACCTTCATACACTTTTTCCAAACAACAGA
AATGTAGTTCAAAGGATTGCACCTTCATACACTTTTTCCAAACAACAGaG
TTTGAAATGATTCGACTTGGTTTCATTGCTGGTTGTGTATTGGCGATTCT
CAGTGTCCTTGTGGCCCTGATTCAAGCCTTTGTACAGAGAACCCTGACAT
TCCCAATAGTTACTTTGCAGATATGTTCAGaGTTTGAAATGATTCGACTT
GGTTTCATTGCTGGTTGTGTATTGGCGATTCTCAGTGTCCTTGTGGCCCT
GATTCAAGCCTTTGTACAGAGAACCCTGACATTCCCAATAGTTACTTTGC
AGATATGTTCAGTCTTGTTATGCATTGGTTGCTTATCATACTTCACATAT
CtttcacgtgaccgaaaaatgaATATGAGAACACAATGGAGTTATATCAT
TGGTTGGATTGGTGCAGGCGTTGTAATGATGTCATTATTAATATTATTGG
TTATATCAAATCGTAAAAAATCGAGTCCCACTCTTTATTAGTCTTGTTAT
GCATTGGTTGCTTATCATACTTCACATATCtttcacgtgaccgaaaaatg
aATATGAGAACACAATGGAGTTATATCATTGGTTGGATTGGTGCAGGCGT
TGTAATGATGTCATTATTAATATTATTGGTTATATCAAATCGTAAAAAAT
CGAGTCCCACTCTTTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1240441..1244720 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 184-360:4104 |
| Aaloc | 52-180:3016 |
| Aaloc | 1-48:1 |
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