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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1275655..1279532+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010903 ID=XLOC_010903|Name=XLOC_010903|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3878bp|location=Sequence derived from alignment at sc0000063_pilon:1275655..1279532+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAAAAGGGGAGGCTTCCAAATGCTGCATCGAATCTCAAGATATCACGTG
TCAAAAACGTAAgtatcccagctgacacacaacgttgttccaacgttttt
ctaacgctcacaacgtccatataacgttaaatgaatgttgaaacaacgtt
gtgtgtcaaaAACGTAAGCATAAGAGATTTTGATCGAATGTGATTAAATT
TCGAACCATTACCTCCTAGATGAGTGTTtggttaaaagttttatttttac
ataagtgttcccgtcgtttcatatcagacacatatttcatatcagaacat
TGTCTGGCTATTTTTATGTTATGttgatataagaaaaaaaatgtttttct
ttcctctttcctctttctgaaattcttaaattaaaatttatgagtaagca
aacgataagTAGTCTAGTTCAAACCTAGTAAccgttttttaataattttt
ctcatAGCAAAAACATGCTCTGTAATAAAATCGACTTGTGCTCATTGCAA
ATCTGGTTATTATTCAATGGCAACTGGTGAAAAAGCATTTTGTGACATGG
GAAGTAAGAAACTCATCTTTCTTGATGATAAagttatataaagtaaaatg
aaatttcattctcaaaaacctattcaGTCATCTTGGGAATTAAatatgta
ctcttaggttccaaataaacgggccccccccccgcttgttaatttttcga
aaattttccaacccccccggaccttattaggaccccccgtttgttaatct
ctaagaatattttcagctgtcaaagagaaggccccttattttgctctaaa
tagcctaattttagcctatttttaccttatttttgggtttcatttccaac
ccccccggcaattagatcccccccgtttattaaaatttagaaaattttcc
aacccccccgtttattcgagccccccccctgtttatttggaacctaagag
tattgaCTCAATAGAGAATTTCAATCTTCTTCCAGTTATAACCAATGTTC
TATAATGATGAGTTTTGAGGGTTTTCTTCATATAAAGATTCTACCACCTT
ATTTCATTCGGGAAGATTCACCGCGCCACTATTCCGCCATTATAGTATTT
TTTCTTACGGGGGCGGACCTCTATTATTTGAACATTTCCGTAAATCGAAC
TAAAACATTATTCCCCTCAGCTGAAAATTGGTATctattactctctgtaa
ttcgaatctttttctatctatttttctatagtatttctgtaattcgaact
aaaacattttTCCCCTCAGCTGAAAAGTGGTATCTATTACTCTCtgaaat
tcgaatctttttctatctatttttctatagtatttctgtaattcgaactt
aaaCATTATTCCCCTCAGCTGAAAAGTGGTATctattactctctgtaatt
cgaatctttttctatctatttttctatagtatttctgtaattcgaactaa
aacatttcCCCCCTCAGCTGAAAAGTGGTATCTATTACTCTCtgaaattc
gaatctttttctatctatttttctatagtatttctgtaattcgaactaaa
acatttcCCCCCTCAGCTGAAAATTGGTATctattactctctgtaattcg
aatctttttctatctatttttctatagtatttctgtaattcgaactaaaa
cattttTCCCTCAGCTGCTGAAAAGTGGTATCTATTACTCTCtgaaattc
gaatctttttctatctatttttctatagtatttctgtaattcgaactaaa
acattattcccctcagctgaaaagtggtatctattactctctgtaattcg
aatctttttctatctatttttctatagtatttctgtaattcgaactaaaa
cattttTCCCCTCAGCTGAAAAGTGGTATCTATTACTCTCtgaaattcga
atctttttctaTCTATTTTTCTATAGTATTTCTGTAAATCGAACTGAAAC
ATTTTCCCCCTCAGCTGAAAATTGGTATCTATTACTCTCtgaaattcgaa
tctttttctaTCTATTTTTCTATAGTATTTCTGTAAATCGAACTGAAACA
TTTCCCCCCTCAGCTGAAAATTGGTATCTATTACTCTCtgaaattcgaat
ctttttctatctatttttctatagtatttctgtaattcgaactaaaacat
tttTCCCCTCAGCTATGAAAAGTGGTATGAATTaccttctgtaattcgaa
tctttctctatcTCGAAGAAAACTTGAATCAGAAATAGTCAactataaaa
acaaataaaatttttcattgtCAAAAAGGTGACGATCAGTTTATACCAAG
TTGTAAAACAATCAAAGACGCTTACCCAGAATCCTCTTCGGGTTTTTATC
ACCTTGGTTACAAAGATAACATCTTGGAATTTTATTGTGATATGACTGCT
GATGCaggtgagtttttttttttttgactttttcaaaccaaaattaaaat
tctatacagggtgtccctaattaaagtatcgagtttgaacatgcgattga
gtagaaaagtttgtgtgtgttatcgctaaaatataagaacgttctccatc
acacaggcttattacaacaggtagttacaacgtataaattaattgtaatg
acaaagaaaaaagagagagagcttaaaatacaattttgtgaacacgcaca
taaaactttctacttatagttgtgtttcgactcgatactttaattaggga
caccctgtacagggtgtaccgaaaaaaagtatcgaatTCGAACATGATTC
CGAGTAGAAGGTTGTGTGAGTTGCGTATGTTTaataaaatgtaagaaaat
gtaTACCAACACAATAATATTTTTGCAACAGCCAttataattaaaaataa
ttaactttctttacaattttcatgacgttaaagttattgagagtTGTTTT
TCCgcaaaagttattcataaataatgtctcatgacaatagacctaatcgg
agtttttgattttttttaaaaagtgatgcattatgggattgtttcgagtg
tattacaatagaattccctcgaggaattcctaagagatttctattgtaat
acactcgaaacaatcccacgatacaccgtttttttagaaaaataaaaaac
tccgataagatctaatTAATGGCagagagagaaactttgataaacatttc
aAGTTTAATGGAACAGACACAAGAACTTTGTTTACTTCTATTTACCCAGa
gaaaatttgacaatttgagaattttacgtggatttaatttcgtaAGTCAA
TGATCTAACTCAATTGTAATGGCGCAAATTTACGAAAAACGCGAATATCG
ACATAAAGAAGGTAAAATTGTTTTAGGCGAATGAAAGAGAATAAATACGG
TCTGCAtttttttAAGGTGGATGGACAATGGTAGCCAACATTACAATAAC
ATCAAACGCTGAAGCCGAAAGATATCTTCTAAGAAATATCAAGCAAAATG
GTTTAGGAAGCCTGAAAAATGTGCGATCGGGAGTATACACTTTATCGCTC
GGAACGCTATCTACATTTCAAGAAAGGAATGAGTTTACGGAAATCCGTAT
CAAATGCCAAAAGACGTATTTAGGATTTCAAGTTGACGTTGTTTTGGGTT
ATGGCTCCGAACTTGTCGGTGGTGTAACACCGGAACGGCATGTAAATTTA
TACCGATTCCTCCCGAGTGATTCCCGACACACTCAAGTATCGGGCAGTTA
taaaaaagcagattttgcTAATTTATACAATCATGCTATTTTCGTTCCTG
GTCAATATCATATAGTCATTAATAACGATCCAAATCGTCGCAGATGGGAG
TGTGGTGATTACGACCAGATTCAACCCAACGGTAAAACCTACTCACCGAT
CGGATCATGGCAATTTTTTGTTCGATAA Coding sequence (CDS) from alignment at sc0000063_pilon:1275655..1279532+ >XLOC_010903 ID=XLOC_010903|Name=XLOC_010903|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1590bp|location=Sequence derived from alignment at sc0000063_pilon:1275655..1279532+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAAAAGGGGAGGCTTCCAAATGCTGCATCGAATCTCAAGATATCACGTG
TCAAAAACTTAAAAGGGGAGGCTTCCAAATGCTGCATCGAATCTCAAGAT
ATCACGTGTCAAAAACCAAAAACATGCTCTGTAATAAAATCGACTTGTGC
TCATTGCAAATCTGGTTATTATTCAATGGCAACTGGTGAAAAAGCATTTT
GTGACATGGGAACAAAAACATGCTCTGTAATAAAATCGACTTGTGCTCAT
TGCAAATCTGGTTATTATTCAATGGCAACTGGTGAAAAAGCATTTTGTGA
CATGGGAAGTGACGATCAGTTTATACCAAGTTGTAAAACAATCAAAGACG
CTTACCCAGAATCCTCTTCGGGTTTTTATCACCTTGGTTACAAAGATAAC
ATCTTGGAATTTTATTGTGATATGACTGCTGATGCagGTGACGATCAGTT
TATACCAAGTTGTAAAACAATCAAAGACGCTTACCCAGAATCCTCTTCGG
GTTTTTATCACCTTGGTTACAAAGATAACATCTTGGAATTTTATTGTGAT
ATGACTGCTGATGCagGTGGATGGACAATGGTAGCCAACATTACAATAAC
ATCAAACGCTGAAGCCGAAAGATATCTTCTAAGAAATATCAAGCAAAATG
GTTTAGGAAGCCTGAAAAATGTGCGATCGGGAGTATACACTTTATCGCTC
GGAACGCTATCTACATTTCAAGAAAGGAATGAGTTTACGGAAATCCGTAT
CAAATGCCAAAAGACGTATTTAGGATTTCAAGTTGACGTTGTTTTGGGTT
ATGGCTCCGAACTTGTCGGTGGTGTAACACCGGAACGGCATGTAAATTTA
TACCGATTCCTCCCGAGTGATTCCCGACACACTCAAGTATCGGGCAGTTA
taaaaaagcagattttgcTAATTTATACAATCATGCTATTTTCGTTCCTG
GTCAATATCATATAGTCATTAATAACGATCCAAATCGTCGCAGATGGGAG
TGTGGTGATTACGACCAGATTCAACCCAACGGTAAAACCTACTCACCGAT
CGGATCATGGCAATTTTTTGTTCGATAAGTGGATGGACAATGGTAGCCAA
CATTACAATAACATCAAACGCTGAAGCCGAAAGATATCTTCTAAGAAATA
TCAAGCAAAATGGTTTAGGAAGCCTGAAAAATGTGCGATCGGGAGTATAC
ACTTTATCGCTCGGAACGCTATCTACATTTCAAGAAAGGAATGAGTTTAC
GGAAATCCGTATCAAATGCCAAAAGACGTATTTAGGATTTCAAGTTGACG
TTGTTTTGGGTTATGGCTCCGAACTTGTCGGTGGTGTAACACCGGAACGG
CATGTAAATTTATACCGATTCCTCCCGAGTGATTCCCGACACACTCAAGT
ATCGGGCAGTTAtaaaaaagcagattttgcTAATTTATACAATCATGCTA
TTTTCGTTCCTGGTCAATATCATATAGTCATTAATAACGATCCAAATCGT
CGCAGATGGGAGTGTGGTGATTACGACCAGATTCAACCCAACGGTAAAAC
CTACTCACCGATCGGATCATGGCAATTTTTTGTTCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1275655..1279532 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 286-795:3369 |
| Aaloc | 157-282:2281 |
| Aaloc | 61-153:460 |
| Aaloc | 1-57:1 |
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