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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1112740..1116911- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010898 ID=XLOC_010898|Name=XLOC_010898|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4172bp|location=Sequence derived from alignment at sc0000063_pilon:1112740..1116911- (Clytia hemisphaerica_ch_hm2_pilon)
AATAAATACAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGTT
AAGGAAGTATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAAA
AGGATAATAAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATCT
ACACCGAAAGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTAC
TCCTTTAATAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCAA
ACGATTCAAGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTTA
ATGGTTGATCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTAA
CGCCTCAACGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCGC
CACAGTCCTTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAAT
TTATACGATCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGAG
TTTCACTTCCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTAA
ATCTAGAAGAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAAC
ACTGGGAGCCGGTTGAAACACGATCTGAAAAACAAAGACCAAAATAACAA
TTTTGAAGAATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAAC
ACTCGCTTCGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAAA
TCCGATCAAGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGAT
GCTACAAAACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAAA
TATACCAACCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATTC
GGCAAATTAGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGGA
CGATGAAGTTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTGG
ATCAAGTTGATTTTAAGGTCCCATCTATATCAAGTGATAATAGCAAGACA
CTGTTCACACGAAAAAAGAAGGTACGTACCTAGTCTAAATCTAGACTACT
AATTTAAAACTTTATACTAAAATGCTACTAAGATTATTTCAAACTAAAAA
GAGAGATGCGCTCCAGAGAGAGAGGAAAAATTATTGTATTATAAAAAGTC
AATCGCTCGCGGTTTTTTTATAGCAGACTTACTCCTTTTCGGCTTTGTGG
CAGAGCTACCCTTATATAATGGTCTGGAAATCGAGACTAGTACGTTCCTG
TTTCCGGGCTTAAACAATGTTCATAGATTGTTCTTTATATCCAAGCTTGC
ATACAACATTATTTTGACGTTTAACTTATGTCACAACGTCTATATAACGT
TAGATGAACGTTGAATCAAAGTTGTGGTCCTTGATTCGATTATTCCATTC
TGTATGTTAACCGTTACTGTTATCTAAGGCTGGGAATTTCTTTTCTTAAA
TGTTAGCTAGAATTGAGTCTTATTGTTCTTATAAAAAAGCTCTCATATGT
CTTGCCTATTCTCGAATACCGTCATTTCTCTAATTAGTTGGGAAGAAGTC
CTTTAATTTATTTCCTCTAAATATCAAGTTTTTTGTGTCACCTTAGAGCC
TCTCTCTAATTCGAATGCTCACAACTTATGTCTTTTTCAGTAGATTTGGG
ACATGGACATGGACGGACGAAAAATGTCTTTTGAGATTTGTAGAATTTTG
TATGAATGTTTGAGTTTTCTTTTTTTGTGTATATAGAGATTACCAGCGCT
TCTTCGTGGCGTCACGTCGTTCATCAGCTCCGTGCGCTCAAAGAAAGAAG
ACCCGTACGAGGTAAGCTTGTATTTCTAAAACAATTCTTACCATTCCAAA
ACATGAAATAAAAACCTTCAAAAATATTAAGAATGATTTTATTCCCAATC
TTATTCGAAAAAAGCGCAAAGGTAGAGCATTCAGCTGCGGTATACATGAA
ACCAACCACCTGTTCTGTATCAAAGAAAAATATGGTACTGACGCCTCCCT
TTGCTCAAAAACTAAAGAGAAGGGCTAAAAAGTAAATAGCGGAATCTAGG
CACAGAAAATGATACCCTGCACTACTTTTAGGTAGACAGCTGAGGAAGAG
GGTGCCTTCGGGTCGCCCACAAAAGCGTTCAAAAAACTTTTTTATTCACT
GATTCTTTTTCATTTCAGATCTACTTTAGCTCATCTTCGACAAACCTCCC
ACCTTTTGATATAAATAACATACCAAAACAGCAACGTAAAACTCTACTCA
ATAACGTTACATTACCAAGAGCGTCCCGTAAAGGTTAGAAATCGTTTTCT
TTACTAAACATAAGAATTACTTGTATTAATAAGTAAAAGTCGAAGACTAG
AGTCGAATTTCCTATTAAGACTTTGATTTGCACAGCCCGAGTAGTTCTTG
AACAAACGGTAGAGGAAGTAACATTTACCACTAGGGAATTTGAAAAATTT
CAAAACGCGAAAAACAAAGAAATTTCTCTAGATTCAATCTTTTATATGAA
ATGTAGCGCAAATTTTAAGGCCTCGTTTTTTCTTGCTCGAGAAAGGTTGA
AGATTCGCCTCTCTAGCCTCCGACTTGCAACTAAATGGCTTGCACCACCC
AGAGCAACACGAATGATTCTAAACTTTCTTTTTGTGTCTTGTCTTGTGTG
GGTCTGTTTTCGTTAGATTACTTCACGTTAGTCTTTTCGCATCGAAGAGT
TAGGTACAAGCTAACTAAAGTCAGAGCTCCCGTAATGTAATGTGATGCAA
AAAGACATTTTATAACTTTGGAAAAGAATTTGCCGAAAGATTTAGATAGG
GCGCCTGTTTTAGGTTTTCCTGTGATGCAATGATGTGTCTACGTCTACGT
TTCTTGGGAGAAAATGGGAAAGAATAAACCTTGCTATATCGTTTATAAAT
AGATTTAGGAATTACCTATGTATGTTAGTTAAAATAAGGACCACTAAACT
GTAAAGCCTTCTTTGGGGATTGTACGCTTTTGTAAGCCTTCAAGAAGTCT
TTCTTCTTGATAAGCTTTATTCATGATATTCATGACGCAATGTTTTCTAC
GGAAAGACCCCGGTTTTTGCCAGTAGTGGTGAATTTTATACAACTTTTAT
CTAGTTTAAATTTTCCACTACTGGCTAAAACGGGGGTTTTTCCGTAGAAA
ACATTACGTCATGAATATCATGAATCTGTAACTTAATAACTGATTTAAAT
TACTCATGATTAAGCTGTAATATTAATAATTAAAATAATGATTAAAAGTC
AAAAGCTAGAGTCGAATCTTCTAGATATTTTAGATTTGAAGAGCTCCGAC
CTCGTCCCCGTGTATCCCAGGCTTTATTTATGTTACTGATTGACGCCATA
GAATATTATCTAGTGTTATCAGTAAGCATAAAAAAGCTGATAATACGCAG
GGAACGAGGTTGGAAGAGCTCTACTTATAATTCATGATATTCATTATGTA
ATCTTTTCTACGGAAATAACCAATAGTGGCAAATTTTAGCTAAAGAAACA
TTACGTCATGAATATCATGGATAGACATGATTTGTGCGGCGCGTGTGGTT
TTCATATAATCACCCGATAGGAAGCAACATTTCACCAGGGATTTTTAAAT
ATGTAAAATGCGAAACAAACAAAGTACTAGATTCAATCTGTGATTTAAAA
TACGAAATTAATGTTAAAGTTTCACTTTTGCTTGTTTGGGAAAGTTTGAA
GACTCGCCTCTAGCCTTCGTCTTAAAACACCTTAAATTAAAACCCTTTAA
AACTCTAAACATAAATATAAATTTTAAACTTTAAAAGGATTCGATATGGA
CGAGCTATTCGAAAGCAAGCCGATCGACGGAGTATACAGGACACACAGCA
TTGAGCGCCATCATGGTACACCCACACCGAGTCCACCTCAATCGGGGTAC
AAAAACAAAAACAACGTCAAACATAATCCAGCTAATATCGAATTCAACCG
AATGGACCAATCATTGAGAGGGACTAGTCAATACGTTAAAGAAATCGAAA
AACAACAGGCTAAAGACTATTTACCAGTACACGATGGGCGGGAGGACGCC
CTTCCTTTGGCGGGCCGAATGCGGACAAATTCAAACTCGCGTAAAGAACG
TGTTAACGCTATCATATGGTAG Coding sequence (CDS) from alignment at sc0000063_pilon:1112740..1116911- >XLOC_010898 ID=XLOC_010898|Name=XLOC_010898|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3192bp|location=Sequence derived from alignment at sc0000063_pilon:1112740..1116911- (Clytia hemisphaerica_ch_hm2_pilon)
AATAAATACAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGTT
AAGGAAGTATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAAA
AGGATAATAAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATCT
ACACCGAAAGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTAC
TCCTTTAATAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCAA
ACGATTCAAGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTTA
ATGGTTGATCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTAA
CGCCTCAACGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCGC
CACAGTCCTTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAAT
TTATACGATCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGAG
TTTCACTTCCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTAA
ATCTAGAAGAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAAC
ACTGGGAGCCGGTTGAAACACGATCTGAAAAACAAAGACCAAAATAACAA
TTTTGAAGAATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAAC
ACTCGCTTCGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAAA
TCCGATCAAGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGAT
GCTACAAAACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAAA
TATACCAACCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATTC
GGCAAATTAGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGGA
CGATGAAGTTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTGG
ATCAAGTTGATTTTAAGGTCCCATCTATATCAAGTGATAATAGCAAGACA
CTGTTCACACGAAAAAAGAAGAATAAATACAAGAAGTTTAAAGTGACTGA
TCAGAACATACAAAATTCGTTAAGGAAGTATCATTCTATAGATATTGGAC
AAGCAATGCAAGAACTGGAAAAGGATAATAAATCTTCAGTCGATAGAAAA
TTCGAAGAATTGAATGCATCTACACCGAAAGAATCGAATAAATCGGATAA
ATCGAGTCTTTTCCCTGCTACTCCTTTAATAGATGAAAAACAATTCGATC
GATTAATTTCATCGACTCCAAACGATTCAAGTGTATTAGATAAATCGAGT
TTATCACCTGCTACGCCTTTAATGGTTGATCGTCGCTTCGAAGAACTTAC
GAAAGCAATGAATCTGAGTAACGCCTCAACGCCAACCGACCAGATATGTG
AACTACATTCTCATTTATCGCCACAGTCCTTCGCACCGAGTTTCGCATCG
ACACCGACAACTACCGACAATTTATACGATCGTTTATCGGATATTGATTC
TCACCGACGAAGTCCGATGAGTTTCACTTCCGAAGACCGACGAGCAATAT
CAGAACCATTTTCGTTTTTAAATCTAGAAGAACCTCCAGCTGGACCTCCG
ACGCCACCAGTAAGGACGAACACTGGGAGCCGGTTGAAACACGATCTGAA
AAACAAAGACCAAAATAACAATTTTGAAGAATTACGTAAAGTTGAGCGAC
AAAAATCAAGCGTGTCACAACACTCGCTTCGCCCGGAAAGATCCGATTCG
GGAAAATCAAAAACCCGAAAATCCGATCAAGTTGAACGCGGACCTTCTTT
CAAAAGATCAATTTCACCGATGCTACAAAACTTACGGTATAAAGACATGG
GTGATGACACTCCAGAAGAAATATACCAACCATCAACATTCTTAGCACAA
TCCAATAAAAATTCATCATTCGGCAAATTAGACCGTGTCCGAAGTTTCTC
AGCTGATCATTTAGTTTCGGACGATGAAGTTTTTAAACCTTTTACTGATT
ACCTTGATGAAAAAGGACTGGATCAAGTTGATTTTAAGGTCCCATCTATA
TCAAGTGATAATAGCAAGACACTGTTCACACGAAAAAAGAAGAGATTACC
AGCGCTTCTTCGTGGCGTCACGTCGTTCATCAGCTCCGTGCGCTCAAAGA
AAGAAGACCCGTACGAGAGATTACCAGCGCTTCTTCGTGGCGTCACGTCG
TTCATCAGCTCCGTGCGCTCAAAGAAAGAAGACCCGTACGAGATCTACTT
TAGCTCATCTTCGACAAACCTCCCACCTTTTGATATAAATAACATACCAA
AACAGCAACGTAAAACTCTACTCAATAACGTTACATTACCAAGAGCGTCC
CGTAAAGATCTACTTTAGCTCATCTTCGACAAACCTCCCACCTTTTGATA
TAAATAACATACCAAAACAGCAACGTAAAACTCTACTCAATAACGTTACA
TTACCAAGAGCGTCCCGTAAAGGATTCGATATGGACGAGCTATTCGAAAG
CAAGCCGATCGACGGAGTATACAGGACACACAGCATTGAGCGCCATCATG
GTACACCCACACCGAGTCCACCTCAATCGGGGTACAAAAACAAAAACAAC
GTCAAACATAATCCAGCTAATATCGAATTCAACCGAATGGACCAATCATT
GAGAGGGACTAGTCAATACGTTAAAGAAATCGAAAAACAACAGGCTAAAG
ACTATTTACCAGTACACGATGGGCGGGAGGACGCCCTTCCTTTGGCGGGC
CGAATGCGGACAAATTCAAACTCGCGTAAAGAACGTGTTAACGCTATCAT
ATGGTAGGATTCGATATGGACGAGCTATTCGAAAGCAAGCCGATCGACGG
AGTATACAGGACACACAGCATTGAGCGCCATCATGGTACACCCACACCGA
GTCCACCTCAATCGGGGTACAAAAACAAAAACAACGTCAAACATAATCCA
GCTAATATCGAATTCAACCGAATGGACCAATCATTGAGAGGGACTAGTCA
ATACGTTAAAGAAATCGAAAAACAACAGGCTAAAGACTATTTACCAGTAC
ACGATGGGCGGGAGGACGCCCTTCCTTTGGCGGGCCGAATGCGGACAAAT
TCAAACTCGCGTAAAGAACGTGTTAACGCTATCATATGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1112740..1116911 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1264-1596:334 |
| Aaloc | 1147-1260:1955 |
| Aaloc | 1072-1146:2387 |
| Aaloc | 1-1071:4173 |
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