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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1288604..1291479- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010889 ID=XLOC_010889|Name=XLOC_010889|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2876bp|location=Sequence derived from alignment at sc0000063_pilon:1288604..1291479- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCTTTGATTGAATCAACCATCGAATACTTCAATAATCTCTCTTGTGT
ACAATGGATACCAAAGAAGTCTGAGCACGAGCAATATGTGACCTTTCAAC
CTTCAACAACGTGAGTTTGACAATTCTAATTTCACTTACTCTTAGGTTCC
AAACTATAGGGGAGTGGGTTTGGAAAATTTTCAACATTTTGATAAACTGG
TGACACCTAATTGCTGAGGTGGGGTTGGAAATATAGGCTAAAATCAGAGT
ATTTAGGTTCATTCTTAGGTGGTTTCAGCAAAGTAAAATATCCGATCAAA
ATACACTGTAGGGGTACTTTCGATAAAATCATAGAGGTATAAATAAAGAC
AGGAGATGAATTTGTCGGTAATTGGTCGTTAAAGTCTTTTGATTTCTTTT
ATGTAATAAATCAAAAGAAATTCTAGGCTCGCCCGACGAAATACGACTTT
TTAGTAGAACTCAAGTCTGTTCTGAACATTCTTACTATCAGCATCGAAGA
TTTCTAGCCTTCTAATATACGAGAATAAAATAAAATTTAGCTCCAGGAAA
TAAGTTTGCGTTCAATTTTGGCATCCATTAAATTTTGTTTTGAAAAGATA
TTTTCTCTAGCCAGAAAATGAAAAGTTCTTTATAAGCACACACAATTTCA
GACCCAATTTGTAGACAAAAAGTCGCTGGAGAATTTTGGAGGAAAGTATT
AAGCAGTAGGGTTCACCTTGAAGAAAATGTTGATCGAAAAATCTTGTTAT
TTGATGAAGGATTGCAAAGTTTACAGGCCCTTTTTTAGTCCAAATATTTT
CTTACACCAATGTCAGAAACAATGAATCTCGTCTCATCTTATTTCCAACA
CTTAAGTTAGCCAATAACATTTCACCTATCAACAAAAGAGCTCATTAAAA
ATGCACGATATATGAGATTATGAGCATGCATACCTCGTAATTTTTTTAAT
CGTAGGGCGAGCATGGTTACAATAGCATACTTCTCCTGTTTCTTTATACC
TCCATGATAAAATGCAATGCAATGTACTTTTGAAATTGAGTGCCCACAGA
AGCATGTTCACAAGACTTTCTACCTTCACTTATATTTCTAGACGTTTAAT
TCAATTTAAATCATCTTTAGGTGTAGTTCTCTGATTGGACGCAATCAAAA
TGGTAACCATCAATCAATTTTCATTGGTCAAGAATGTTCATATCGTCCAA
TAATATTGCACGAAATGTATCACGTGATGGGGTTTCAACATGAAATGAAA
AGATTTGATCGAAATGATAATATTGAAGTACTTTGGGAAAATATTTTACC
AGGTATGTTTTAAAACTGTCTTCGGTTTTGCTTTTAAATTAGAGTGATAT
CGTGTGCTTACTCATCAATTTTAATACATAAGCTTTTCCCCATTGATTTG
ACACGATTGTGGAGCAAGATTGATCAGAAAAGAAAAAGAAATTTTTGACT
CGGTCATACCTTGTTAAACCCCCTTCTCACAGACCCACTTGGGACCCCTT
CACGCTGGAGAAATTGGCCTGTTGGAAAATTATCAAACAAAACAATCCTC
ACTGCGAAAAACTATGTTATTTATCCCATCCCCACTGGATTTTCTGACTT
AAAAACAAAAAGAATTGAGGCCACAGCTACTAAAAATATGGGAATATCAG
TCCCCTTCGAGTTTCACTCCGTTATTTTTACCCCCCACTGGCTTAAAAAG
TTCTACCGGGTCTCTGAGAAGGGTGAGTCTTATTGGTCTAGTTTCGTATG
AGTTTCGACATATAAGTCACAAAGAAGCTATTAATTTAAAAAATATCCTT
TTCTTCTTTACAGGCTTTGAAAGATATTTCAAGAAACTTCTTCCAGAGAA
AACTTTATTCCCTGATTACCCATACGACATTTCAAGCATATTGCATTATG
GATCTTTTGCTTACTCAAAATATTCATCTTTACCCACAACCCTTCAATCA
AATGGCATGAGAATTAGACCAATCAAAGAGAGATCTCTTACACAAATGGA
TATTCAGAAACTGAATGATTTGTACAAATGTAAAGGTATGGTTTATCATG
TCCCAGGCCTGGTGGAAGTGGGGAGACTGGGGAGACTTTAGCCTCCTCAC
TTTTGAGAAAATGAGATTTTTTTCTCAAATTCCCAACTTTTACGGTTGTT
CCGCCGTTTTTTTGTCCTAAAAAAACCTTTAAAGATACTAATAAGAACCG
CTAAAGCTTTCAGTGGTAATTATTTAAAGGTAAATTTTATCTCCAAACGA
ATTCTGATAAAAAGCACTACTGGCATTATTATAAGGTATAACCAGACTAT
TTTAAAAGTAATTAAGCTCATGACTGCAGGAAATCGGTGGAAATAAATAA
ATGGGTACTAATGAGAAAGGGGAATCCAAAAATTTTTCTAAAATTGATAA
ACATGAGCTTTGGAGCCTTAGGCTACTTATAACGGAGTTTTAACCATGTT
TTAGATTCGCTGAGGCTACAAAATAGAATTTTTTGTCTCCCTTCAAATGT
AGAAGCAAACCTAACTTATTCTCTCAAAACTTACATTTTAGCTACAAATT
ACAAGCTACTACAATCAATTCTCTCTCAAATTCGAACTTCCATAATTCCA
ATGTTTGTGTAATTCGAACTGAAGCTTTAGTCCCCTCAGCAGGAAATTAA
ATTAGAATATCCGCTTTAATTCAAATATTTCTCCAACTTGAAGAAATGTT
ATAGTCCCTTGAAGATCGAATTAGAGACAACAAATATAACTTAATCGTCA
TGTGGCAATATTTTAGATACACAAAAAGAGGGCTGGAGTTCTTGGTCAAA
TTACAGTAGATGCAATGCTGATTGTTTCAAAACAAGATTCAAATTTTTCA
CCGGTACAAATTATGGCACCGATCCT Coding sequence (CDS) from alignment at sc0000063_pilon:1288604..1291479- >XLOC_010889 ID=XLOC_010889|Name=XLOC_010889|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000063_pilon:1288604..1291479- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCTTTGATTGAATCAACCATCGAATACTTCAATAATCTCTCTTGTGT
ACAATGGATACCAAAGAAGTCTGAGCACGAGCAATATGTGACCTTTCAAC
CTTCAACAACAAAGCTTTGATTGAATCAACCATCGAATACTTCAATAATC
TCTCTTGTGTACAATGGATACCAAAGAAGTCTGAGCACGAGCAATATGTG
ACCTTTCAACCTTCAACAACGTGTAGTTCTCTGATTGGACGCAATCAAAA
TGGTAACCATCAATCAATTTTCATTGGTCAAGAATGTTCATATCGTCCAA
TAATATTGCACGAAATGTATCACGTGATGGGGTTTCAACATGAAATGAAA
AGATTTGATCGAAATGATAATATTGAAGTACTTTGGGAAAATATTTTACC
AGGTGTAGTTCTCTGATTGGACGCAATCAAAATGGTAACCATCAATCAAT
TTTCATTGGTCAAGAATGTTCATATCGTCCAATAATATTGCACGAAATGT
ATCACGTGATGGGGTTTCAACATGAAATGAAAAGATTTGATCGAAATGAT
AATATTGAAGTACTTTGGGAAAATATTTTACCAGGCTTTGAAAGATATTT
CAAGAAACTTCTTCCAGAGAAAACTTTATTCCCTGATTACCCATACGACA
TTTCAAGCATATTGCATTATGGATCTTTTGCTTACTCAAAATATTCATCT
TTACCCACAACCCTTCAATCAAATGGCATGAGAATTAGACCAATCAAAGA
GAGATCTCTTACACAAATGGATATTCAGAAACTGAATGATTTGTACAAAT
GTAAAGGCTTTGAAAGATATTTCAAGAAACTTCTTCCAGAGAAAACTTTA
TTCCCTGATTACCCATACGACATTTCAAGCATATTGCATTATGGATCTTT
TGCTTACTCAAAATATTCATCTTTACCCACAACCCTTCAATCAAATGGCA
TGAGAATTAGACCAATCAAAGAGAGATCTCTTACACAAATGGATATTCAG
AAACTGAATGATTTGTACAAATGTAAAGATACACAAAAAGAGGGCTGGAG
TTCTTGGTCAAATTACAGTAGATGCAATGCTGATTGTTTCAAAACAAGAT
TCAAATTTTTCACCGGTACAAATTATGGCACCGATCCTATACACAAAAAG
AGGGCTGGAGTTCTTGGTCAAATTACAGTAGATGCAATGCTGATTGTTTC
AAAACAAGATTCAAATTTTTCACCGGTACAAATTATGGCACCGATCCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1288604..1291479 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 517-624:109 |
| Aaloc | 295-513:1062 |
| Aaloc | 112-291:1756 |
| Aaloc | 1-108:2877 |
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