|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1391005..1394693- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010888 ID=XLOC_010888|Name=XLOC_010888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3689bp|location=Sequence derived from alignment at sc0000063_pilon:1391005..1394693- (Clytia hemisphaerica_ch_hm2_pilon)
GCAAAAGGTCAAATTACAAATGCTAACGAATTAACAGAATGTTGGAAATG
TTCTGGCAGTGAGGACTGCGGTGATCGAGATTCTTGTCTCGCTGAGCATG
ATCGGTGTTTGAAACTGAAATACGAGTAAGTCTTTTTGTCTCGCTGAGCA
TGATCGGTGTATGAAACTGAAATACGAGTAAGTCTTTTTGTCTCGCTGAG
CACGATCGGTGCTTGAAACTGAAATACGAGTAAGTCTTTTTGTCTCGCTG
AGCATGATCGGTGCTTGAAACTGAAATACAAGTAAGTGTTTTTGTCTCGC
TGAGCACGATCGGTGTATGAAACTGAAATACGAGTAAGTCTTTTGGTCTC
GCTGAGCACGATCGGTGTATGAAACTGAAATACGAGTAAGTGTTTTTGTC
TCGCTGAACAGGATCGATGCTTGAAACTAAAATACGAATAAGTCTTTTTG
TCTCGCTGAGCACGATCAGTGCTTGAAACTGAAATACAAGTAAGTGTTTT
TGTCTCGCTGAGCATGATCGATGCTTGAAACTGAAATACGAGTAAATCTT
TTTGTCTCGTTGAGCATGATCGATGCTTGAAACTGAAATACGAGTGAGTC
TTTTTGTCTCGCTGAGCATGCGCGATCAATGCTTAAAACTGAAATACGCG
TAAGTCTTTCTGTCTCGCTGAGCATGATCGGTGTTTGAAACTGAACTACG
AGTAAGTCTTTTTGTCTCGCTGAGCACGATTTCCTCGTCCTTCATGGCAG
CCTTCATTAAATCAATTTCTAGCTTTTCTCCTAAAAGCTGTTGAATTTTC
ACAGTCTTGTAGAATAATTAATACCCAGCTGGCACACAACGTTGTTTTAA
CGTTCATATAACGTTATATGGACGTTGGGAACATTAGATGGACGTTGAAA
CAACGTTGGGTATATATTATTTTACTGTCATATTCTTTTTCAGACATGAT
GGTGGTTTCGTGAATGAAGCTAGATGCTCCAAACGAACTGAATGCGATAC
AGAAGCAGTGGCGTTGTGGCAGGGGGGGCCGGGGGGGCCATGGCCCCCCC
AGCGGAGCTTTTTTGAAGGGGCGCCGAAGAGCAAGGGGCGCCAAAAGAGA
TTTTTTTAAACGCCCCAATCTTAAAAATCATACTTTATGCGCCTTAAATT
GCGCCCAGGACCAACTTTACTGAGATAATTTTAAAATACTTTCAATTTTT
TTCGCTCGCTTCGCTCGCAATACAATTTAATTGGTAACTTCTTTGCAATC
TAGCTTATTTATAACTTTTTTTGTGTATATGATAGCATTATTAAATGAAA
ATCTAACTGCGCCCCAAGACCAATTTGCTGACAACAATATTGAAATCATA
GAACATCAATTTTTTCGCTCGCTTCGCTCGCATTTTACATTGTTTCTTTA
ACTTTTTTTTTCGCTCTAGCAAGTGTCAAATTTGTCTATTTTTATTTAGT
GATTTAGGGTGTCTTGGCAGTCGATTTTTAAAATTTTTCTAGTCGGCCCC
AACCATGGTGAAGCCTGCTTTTCCATTCATCAAAGATATATCTACTCTTC
TCCACTAAATATTTCCTTCCTCACAATGCGTAGGCAAATGAATTAGTAAA
AGTTTAGAAACTGGTGGGTGGGGGCACCACTTTGGAAAATTGAAGGGGGC
GCCATTTAAAAAAGAATTGACTTTGGCCCCTCCAGAAAAATTTTCCCACA
ACGCCACTGTAGAAGGTGGGAAAATGGTGTTATGTGACAAGAAGAAGAAG
TGCGAGGTAAGAAGCTTTTAGAAGGAAAATTACAGTGTGTCTTAAAAAGA
GTAGAGAAATTTTTATATCAAGTAAAATCCTCATAATCTATACGAACGAA
GTTTCACGACTGTATACTGAATATTTCAATCTCAAGAACCTATTCAATCA
TCTTTGGAATTGAATACCTATTGTTTAAGCAGGAAATTTAAATCTTATAA
TTCAAACATTCTAAGCCCAGTTAAAATGATGACTTTTGATTTGACTTTGT
AAAAAGATTTGTTTGCTTTTTTTACGCTGCATATAGGAACACGAGGCTAA
ATTTTGATCAAAATCTAAGAACAAATTTTGGTCTAATCCGACCAGTCAAT
TTAATCAATTCAGGCCTAAAAGAATATGAAATAATAAGAACAGCCGAGCT
TCGGCTGAATTAGAGTGTGCGGGAAACAACTTTATTTATCATCCCTCCCA
GCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTATATGGACGTTG
GATAAACGTTGAAACAACGTTGTGTGCCAGCTGGCCTGTATCAAAGCCTC
GCCTCTCACAAAAGCCCAACGGCAAAATATAGTGTTTACCTTATTTGCAT
TAAGCTTCTTCATTTTATTCCGCTGCTAAAAAAGAGTTTGGACAGATCAA
TAAGACAGGGGCGTTTAATAAAATGTTTAAGAGTTTAGGTAATGTTCTAG
TTGGTGAGTTGGTGAGTTGCTAGTTTCGAGTTGAGAAGTTCGTAAAACTT
TACGGCGACCGAAATTTTCTAATTTAAACTAATGTAGCCCAAAAGTACAA
ATTTCAAATTAGCCAGCCAGTACCAAACATATTATTGACTTTAAGATCAT
GAAAATGGTAAGGTGCTGGCTAGCAAAGCCAAAATACTCAGTTCTGTTAT
GTCATTGTCATAATGCTGACAACATGACACGTTCTTGTAAAAATATTGAC
AAAATCTTTAAATAAAATGATTGTCAAACTAATTCCCCAAAAAATATTGA
TCATACTGCAAGTGATGCTTATTGTATAAAATGATATAAGTTGACAGTCA
TCTTAGCCTCAAAAAATTCGTAGAGATAGCTTGTAGAGCTGGAAAAATAA
TGACACTTTCTTTTGTCATTTTATCATTGGAATTGACACTTTTTAATAAA
AATTTTGATCACATTATAAAATACAATGGTTTTAAAGTCACTTTAATCAA
GAATTATATTTATACTCAATGTGATGCAGGAAATATAAATGGATACTCTT
AGGTTCCAAATAAACGGGCCCCCCCCCCCCCCCCGTGTTAATTTTTCGAA
AATTTTCCAACCCCCCCGGACCTTATTATGACCCTCCCGTTTATTAATCT
CTAAGAATATTTTCAGCTGTCAAAGAGAAGGCCCCTTATTTTGCTCTAAA
TAGCCTGATTTTGGCCTATTTTTACCTCATTTTGGGGTTTCAGAAGTACG
ATTTCCACCCCCCCGTTTATTAAAAGCTCGAAAATTTTCCAACCCCCCCC
CCCCCCTTATTCGAACCCCCTGTTTCTTTGGAACCTACGAGTATGAATTG
ACAGTAGAAAATAGCTTTCCATGCTCTCAGCGCACGTGTTTAAGGCAAAT
AAGCATATTACAGGTGGTATATGTATTATACGTATTATATGTGTTATATG
TGTTATATATTACTCTCATATTACATTTACTTTCAAAATCGTACTTTTGA
TGTATGTTATTCTTTTTCGGTAGCCGGTAATTTTTTAACTCTCCAACTCG
AAACTAGCAACTCCCTAACTCGCGAATAGAATAGTTTCCAAACTCAATGT
TTAACATGGTTTCTCGCAATAGATTTCCGCTTGCTGCAGAGGTGACATGT
GCAACTCACCCGCTGTCACAACCAAATTCAATGCCAGCCTTTTGGCTCTT
GTCGTCATGGTTACATTCTATGTTTTTTTTGGACGATAA Coding sequence (CDS) from alignment at sc0000063_pilon:1391005..1394693- >XLOC_010888 ID=XLOC_010888|Name=XLOC_010888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=690bp|location=Sequence derived from alignment at sc0000063_pilon:1391005..1394693- (Clytia hemisphaerica_ch_hm2_pilon)
GCAAAAGGTCAAATTACAAATGCTAACGAATTAACAGAATGTTGGAAATG
TTCTGGCAGTGAGGACTGCGGTGATCGAGATTCTTGTCTCGCTGAGCATG
ATCGGTGTTTGAAACTGAAATACGAGCAAAAGGTCAAATTACAAATGCTA
ACGAATTAACAGAATGTTGGAAATGTTCTGGCAGTGAGGACTGCGGTGAT
CGAGATTCTTGTCTCGCTGAGCATGATCGGTGTTTGAAACTGAAATACGA
ACATGATGGTGGTTTCGTGAATGAAGCTAGATGCTCCAAACGAACTGAAT
GCGATACAGAAGACATGATGGTGGTTTCGTGAATGAAGCTAGATGCTCCA
AACGAACTGAATGCGATACAGAAGGTGGGAAAATGGTGTTATGTGACAAG
AAGAAGAAGTGCGAGGTGGGAAAATGGTGTTATGTGACAAGAAGAAGAAG
TGCGAGATTTCCGCTTGCTGCAGAGGTGACATGTGCAACTCACCCGCTGT
CACAACCAAATTCAATGCCAGCCTTTTGGCTCTTGTCGTCATGGTTACAT
TCTATGTTTTTTTTGGACGATAAATTTCCGCTTGCTGCAGAGGTGACATG
TGCAACTCACCCGCTGTCACAACCAAATTCAATGCCAGCCTTTTGGCTCT
TGTCGTCATGGTTACATTCTATGTTTTTTTTGGACGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1391005..1394693 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 229-345:118 |
| Aaloc | 190-228:1973 |
| Aaloc | 127-186:2746 |
| Aaloc | 1-123:3690 |
|
