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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1816705..1818846+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010865 ID=XLOC_010865|Name=XLOC_010865|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2142bp|location=Sequence derived from alignment at sc0000049_pilon:1816705..1818846+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAACTCTAGTTGCTCTTTTACTCCTTGGAGTAGTTGCTTTAGCATC
TGCATCCTACTCAGTAAGTATAATCAGATTCATCTCAATTCAAATCACCA
GATCTTATAATCTATAGTTTTATtcgaaggaaaaaaagaaatatgttttc
attttaagtCCTCATATACTCATCATATAATACTCGTCTTAGGTTTTCAA
AACCATTTCTGTATGTATTCTTTTCATATATaactggaaaattttccaaa
cattttcttcttcttttttccagTCAAGATCATTTTTCGACAACTGTTGT
AAACCAGGAGCCAAGGGACATACAGGACCCCAGGGTCCCAAAGGAAATGA
TGGAGACAAAGGAGAAACTGGAGATGTAGGACCCAAAGGACACCCAGGAC
CAAAAGGAAAGACTGGACACAAAGGAGCAGTAGGACTTAAAGGATTTACA
GGACCAAGAGGTGACAAAGGACACCCAGGACAACAAGGAAAAACAGGACA
TCCAGGACCAGTTGGACCAAAAGGAGAAACAGGACCAAAAGGAGATTCTA
GCAAAGGACACCCAGGACTAGTTGGACCTAAAGGAGCCACTGGCATGACA
GGACCACAAGGAGATAAAGGACCACAAGGACCAGCTGGTGCTGATGGTAC
TGACGGAAAACCGGGACATCCTGGACAAGACGGCCCACGTGGTCCAACTG
GACACCCAGGAAAAGACGGCAAACCAGGCAAAGATGGTAAACCAGGAAAA
GACGGTGAAGATGGCAAGAGAGGAAAGAGAGGATTCACAGGAACAAAAGG
AGATGCTGGAGCTGATGGTAAAGATGGTGCTGACGGTGCCACTGGACCAG
CTGGTCAAGACGGTGCACCTGGTAAAGATGGAGCTGCAGGCAAAGCAGGA
CATCCAGGAAAAGACGGAAACAAAGGTGCCAAAGGAGAAACAGGAGATAA
AGGACAACCTGGATCTGACGGACTTGATGGTGGTGCTGGACCCGTTGGAC
AAAAAGGAAACAAAGGAGAAACTGGCCCAAGAGGAAACACAGGAGCACCA
GGAAAGAATGGACATCCAGGAGCTAAAGGACAAGACGGAACTGATGGTAA
AGACGGCAAAGATGGAAAACCAGGAAAAGCAGGACACCCAGGACCACGAG
GACCACGAGGACCAAAAGGACCACGAGGATTCAAAGGAGAAGCTGGTGAT
GATGGTGATGATGGCAAAGATGGAGCACCAGGATTTGATGGACAACAAGG
ACCACGTGGAGAGAAAGGACCACGAGGACCACAAGGACCACAAGGACCAG
CTGGAAAAGATGGTGCTGATGGTGCTGATGGTGCTAACGGAAAAGACGGT
GACTGTCCCAGCCTTAACTACAAAGAATGCGTCTATGGAGAATCTCCAAT
TAACCGTGGAATCCTCTTCCCAGATGTAAGTgactttttatataaataaa
gTTCATATAGACAATACTTCACAGAGAGACAGGCTCTTTCTGCTCCTTCT
GATAATTATTCGGCTTTAAAGGTTAATTATCTGAATGATTATTCCACAAT
AATAAATTAGCATAATTTATTCAATGAAAATGCACAGAAGGAAACAAAGG
TTAGCAATCACATATCAAAGCATACTTCTTCCTTCAAGTAGAGTCAGCGA
TAACCAGATAATTGACAGGTGAAAACTACTGTTATGACTATCTAATACTC
TGCTATGGGAAAACTAGATCGTAATccaattcattttcttttttttcagg
catGTGCTATTGGACGTGCTCAAAGCAACTCACGACTTCGTGTTGTTTTC
AACAGCAAAATCATTTTGACTTGCGATGCCCTTACACGTAAATACAACCC
TAAGGGATGTTGTGCACAATACGATATCGTCGTCGATAACGTCGTTATGT
TCTCCCGACAACGTATTCTTCATGTTACCCCATACTTGACGGACAACATC
AATATTGAAACTTTGGTCGTTGCACAGAAGAAACACTCCAAAGTTCAAAT
CAAACTTTCCGAATGCGGCAACCCCAAATTCGAATACATCAACAAAGCAC
ATGCAGGCCAATTTGAACACAGCCGTGTCATCATTGAGGAATTGAACTTT
GCCGGATTTAACGGACAAAGCAAAATCCAAAAGGCCCATTAA Coding sequence (CDS) from alignment at sc0000049_pilon:1816705..1818846+ >XLOC_010865 ID=XLOC_010865|Name=XLOC_010865|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3216bp|location=Sequence derived from alignment at sc0000049_pilon:1816705..1818846+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAACTCTAGTTGCTCTTTTACTCCTTGGAGTAGTTGCTTTAGCATC
TGCATCCTACTCAATGAGAACTCTAGTTGCTCTTTTACTCCTTGGAGTAG
TTGCTTTAGCATCTGCATCCTACTCATCAAGATCATTTTTCGACAACTGT
TGTAAACCAGGAGCCAAGGGACATACAGGACCCCAGGGTCCCAAAGGAAA
TGATGGAGACAAAGGAGAAACTGGAGATGTAGGACCCAAAGGACACCCAG
GACCAAAAGGAAAGACTGGACACAAAGGAGCAGTAGGACTTAAAGGATTT
ACAGGACCAAGAGGTGACAAAGGACACCCAGGACAACAAGGAAAAACAGG
ACATCCAGGACCAGTTGGACCAAAAGGAGAAACAGGACCAAAAGGAGATT
CTAGCAAAGGACACCCAGGACTAGTTGGACCTAAAGGAGCCACTGGCATG
ACAGGACCACAAGGAGATAAAGGACCACAAGGACCAGCTGGTGCTGATGG
TACTGACGGAAAACCGGGACATCCTGGACAAGACGGCCCACGTGGTCCAA
CTGGACACCCAGGAAAAGACGGCAAACCAGGCAAAGATGGTAAACCAGGA
AAAGACGGTGAAGATGGCAAGAGAGGAAAGAGAGGATTCACAGGAACAAA
AGGAGATGCTGGAGCTGATGGTAAAGATGGTGCTGACGGTGCCACTGGAC
CAGCTGGTCAAGACGGTGCACCTGGTAAAGATGGAGCTGCAGGCAAAGCA
GGACATCCAGGAAAAGACGGAAACAAAGGTGCCAAAGGAGAAACAGGAGA
TAAAGGACAACCTGGATCTGACGGACTTGATGGTGGTGCTGGACCCGTTG
GACAAAAAGGAAACAAAGGAGAAACTGGCCCAAGAGGAAACACAGGAGCA
CCAGGAAAGAATGGACATCCAGGAGCTAAAGGACAAGACGGAACTGATGG
TAAAGACGGCAAAGATGGAAAACCAGGAAAAGCAGGACACCCAGGACCAC
GAGGACCACGAGGACCAAAAGGACCACGAGGATTCAAAGGAGAAGCTGGT
GATGATGGTGATGATGGCAAAGATGGAGCACCAGGATTTGATGGACAACA
AGGACCACGTGGAGAGAAAGGACCACGAGGACCACAAGGACCACAAGGAC
CAGCTGGAAAAGATGGTGCTGATGGTGCTGATGGTGCTAACGGAAAAGAC
GGTGACTGTCCCAGCCTTAACTACAAAGAATGCGTCTATGGAGAATCTCC
AATTAACCGTGGAATCCTCTTCCCAGATTCAAGATCATTTTTCGACAACT
GTTGTAAACCAGGAGCCAAGGGACATACAGGACCCCAGGGTCCCAAAGGA
AATGATGGAGACAAAGGAGAAACTGGAGATGTAGGACCCAAAGGACACCC
AGGACCAAAAGGAAAGACTGGACACAAAGGAGCAGTAGGACTTAAAGGAT
TTACAGGACCAAGAGGTGACAAAGGACACCCAGGACAACAAGGAAAAACA
GGACATCCAGGACCAGTTGGACCAAAAGGAGAAACAGGACCAAAAGGAGA
TTCTAGCAAAGGACACCCAGGACTAGTTGGACCTAAAGGAGCCACTGGCA
TGACAGGACCACAAGGAGATAAAGGACCACAAGGACCAGCTGGTGCTGAT
GGTACTGACGGAAAACCGGGACATCCTGGACAAGACGGCCCACGTGGTCC
AACTGGACACCCAGGAAAAGACGGCAAACCAGGCAAAGATGGTAAACCAG
GAAAAGACGGTGAAGATGGCAAGAGAGGAAAGAGAGGATTCACAGGAACA
AAAGGAGATGCTGGAGCTGATGGTAAAGATGGTGCTGACGGTGCCACTGG
ACCAGCTGGTCAAGACGGTGCACCTGGTAAAGATGGAGCTGCAGGCAAAG
CAGGACATCCAGGAAAAGACGGAAACAAAGGTGCCAAAGGAGAAACAGGA
GATAAAGGACAACCTGGATCTGACGGACTTGATGGTGGTGCTGGACCCGT
TGGACAAAAAGGAAACAAAGGAGAAACTGGCCCAAGAGGAAACACAGGAG
CACCAGGAAAGAATGGACATCCAGGAGCTAAAGGACAAGACGGAACTGAT
GGTAAAGACGGCAAAGATGGAAAACCAGGAAAAGCAGGACACCCAGGACC
ACGAGGACCACGAGGACCAAAAGGACCACGAGGATTCAAAGGAGAAGCTG
GTGATGATGGTGATGATGGCAAAGATGGAGCACCAGGATTTGATGGACAA
CAAGGACCACGTGGAGAGAAAGGACCACGAGGACCACAAGGACCACAAGG
ACCAGCTGGAAAAGATGGTGCTGATGGTGCTGATGGTGCTAACGGAAAAG
ACGGTGACTGTCCCAGCCTTAACTACAAAGAATGCGTCTATGGAGAATCT
CCAATTAACCGTGGAATCCTCTTCCCAGATgcatGTGCTATTGGACGTGC
TCAAAGCAACTCACGACTTCGTGTTGTTTTCAACAGCAAAATCATTTTGA
CTTGCGATGCCCTTACACGTAAATACAACCCTAAGGGATGTTGTGCACAA
TACGATATCGTCGTCGATAACGTCGTTATGTTCTCCCGACAACGTATTCT
TCATGTTACCCCATACTTGACGGACAACATCAATATTGAAACTTTGGTCG
TTGCACAGAAGAAACACTCCAAAGTTCAAATCAAACTTTCCGAATGCGGC
AACCCCAAATTCGAATACATCAACAAAGCACATGCAGGCCAATTTGAACA
CAGCCGTGTCATCATTGAGGAATTGAACTTTGCCGGATTTAACGGACAAA
GCAAAATCCAAAAGGCCCATTAAgcatGTGCTATTGGACGTGCTCAAAGC
AACTCACGACTTCGTGTTGTTTTCAACAGCAAAATCATTTTGACTTGCGA
TGCCCTTACACGTAAATACAACCCTAAGGGATGTTGTGCACAATACGATA
TCGTCGTCGATAACGTCGTTATGTTCTCCCGACAACGTATTCTTCATGTT
ACCCCATACTTGACGGACAACATCAATATTGAAACTTTGGTCGTTGCACA
GAAGAAACACTCCAAAGTTCAAATCAAACTTTCCGAATGCGGCAACCCCA
AATTCGAATACATCAACAAAGCACATGCAGGCCAATTTGAACACAGCCGT
GTCATCATTGAGGAATTGAACTTTGCCGGATTTAACGGACAAAGCAAAAT
CCAAAAGGCCCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1816705..1818846 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1216-1608:1750 |
| Aaloc | 64-1215:274 |
| Aaloc | 1-63:1 |
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