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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1825482..1827580+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010864 ID=XLOC_010864|Name=XLOC_010864|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2099bp|location=Sequence derived from alignment at sc0000049_pilon:1825482..1827580+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCTCACATCGAGACATATTCACTACTAGGATAGTCTCAAAAATTGAATC
AACAACAATGGCACGTTTCGCCTTACTCGTATTAGCTACATTATGCTTTA
TCCACGCTTCATATGGTTGGGATGTAAGTGTCTTAATATATTTTTCGACT
TATCGGTTGTATTATTTCTTCAAAGAACTGAATTAAGTtgaattttagct
cattttgtttatcatgaaaaagtaattaagaacggttttaaactaaattt
aaaCTGAGTCCTTTTcaagtgtattttgattttattaataaTCCTGACTT
TGTTCTTTTCTCCAGTTCGTCCAACAATACAGAAATTGTGATCACTGCCG
TGGCCCCAAGGGAGACCGTGGAGCCACAGGAGCTGACGGTAACAAAGGAG
CAACAGGACACCAAGGACCCCGAGGACCAAAAGGATCAACTGGATCACAA
GGAAACAAAGGAGCACAAGGAGACAAAGGAGCACAAGGAGATGCTGGAGC
TCGTGGCGAGAGAGGAGAGCCAGGAGAGCCAGGAGAACAAGGACCAGTTG
GACCAAAAGGACCAACAGGAAACAGAGGACCTGCCGGAGACTCCATCCCA
GGAGACAAAGGACCAAAAGGACCAACTGGAGATAAAGGTGCTACAGGCCC
ACAAGGACCCAAAGGAGACAAAGGAGATGCCGGCTCTGATGGTAAAGACG
GTAAAGACGGCAAAGATGGTGCTGATGGTCCAAGAGGATTCAAAGGAGCC
AATGGCGAAGATGGTGCTGACGGCAAAAACGGTGCTGATGGTAAAGATGG
TGCCAAAGGAGCCACAGGACCCAAAGGACGCGACGGTATGAAAGGAGCCA
ACGGCAAAGATGGTGCTGATGGTGCTGACGGTGCTCAAGGACCAAAAGGA
CAAAACGGTGCTAATGGACAAGATGGTGCTGATGGTGCTAACGGTGCTAA
TGGTGAAGATGGTGCCAAAGGAGATACTGGAGATCAAGGACCACAAGGGG
ATGCTGGAAATGATGGTGTTCCAGGAGGTGCCGGACCACGAGGACCACAA
GGAGACAAAGGAGACAAAGGAGCTGATGGACCAGCTGGAAGAGATGGAGC
TAATGGCGCTAAAGGAGCTGATGGTGCTAATGGACAAGACGGTGAAGATG
GTGAAGACGGTGCTCCTGGTGCCCCTGGTGCCCCAGGACCAGCTGGACCA
AAAGGACCCAAAGGAGATGATGGCAGGAAAGGAGACAACGGCAAAGATGG
TGAAGATGGCAAAGATGGAACTGATGGTGCCAAAGGTGGTCCAGGACGAA
AAGGACCAGACGGTGACAAAGGACCAAAAGGAGACAAAGGACCAAATGGT
TCTGATGGTAAAGATGGAGCTGACGGCACAGATGGTAAAGATGATATCTT
TGTCCGAAACTACGTTCAATATATCTtcgatgaaaagaaaacaacagcTT
CCAGCTTCCCAGAACTTATTGCTGTAAGTATATTTTCTCCATTAAAACTT
CTAAAATTAATAACCTTGAAAATCGTTTCCAGTAATTAGCATACATTATC
ATATCTCGTCTCATGCTGAACTGATTTATTCGTCAAAAGTGCATTCGAAG
GAAGTGAGATCAATTGGCATAATTAGATGAACTCTACTTATTTCTGTGAA
GATAGCTTTTGTGCGAAAAAGATAACCTATACATACATTTCTGTTTCAAA
TCGACAAATATAtgattatttttctcttcttctcAACAGTCATGCAGCCT
CATCAAGAAATCTGCTCAATCTGGAATCCGTGTCAGTTTCAATGCCGAAG
CTCGTCTCGATTGCCCAGTCCACGAATACTGTTGTGTCCAATACGTGATC
AAGGTCGACCACAAACAATGTGCTTCCATTCCAGTTGCAAGATCAATCAT
CGGTTACGGATACCCCAAGACTCTCTTCAGTGACGATATCACCGTTGAAG
GAACATGCCAAGGATTTGGAAAAGGATCTCGCAACATCGAGGTTCATGCC
CAAAAATGCTGCAAGAAACCAGGTGACTGCAAAGTCCTCCCAAAGAACCT
TTACACTGGTTCCCTTGATGCTTCTCGTGTCTTCGTTACCGAAGTCTAA Coding sequence (CDS) from alignment at sc0000049_pilon:1825482..1827580+ >XLOC_010864 ID=XLOC_010864|Name=XLOC_010864|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3282bp|location=Sequence derived from alignment at sc0000049_pilon:1825482..1827580+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCTCACATCGAGACATATTCACTACTAGGATAGTCTCAAAAATTGAATC
AACAACAATGGCACGTTTCGCCTTACTCGTATTAGCTACATTATGCTTTA
TCCACGCTTCATATGGTTGGGATAGCTCACATCGAGACATATTCACTACT
AGGATAGTCTCAAAAATTGAATCAACAACAATGGCACGTTTCGCCTTACT
CGTATTAGCTACATTATGCTTTATCCACGCTTCATATGGTTGGGATTTCG
TCCAACAATACAGAAATTGTGATCACTGCCGTGGCCCCAAGGGAGACCGT
GGAGCCACAGGAGCTGACGGTAACAAAGGAGCAACAGGACACCAAGGACC
CCGAGGACCAAAAGGATCAACTGGATCACAAGGAAACAAAGGAGCACAAG
GAGACAAAGGAGCACAAGGAGATGCTGGAGCTCGTGGCGAGAGAGGAGAG
CCAGGAGAGCCAGGAGAACAAGGACCAGTTGGACCAAAAGGACCAACAGG
AAACAGAGGACCTGCCGGAGACTCCATCCCAGGAGACAAAGGACCAAAAG
GACCAACTGGAGATAAAGGTGCTACAGGCCCACAAGGACCCAAAGGAGAC
AAAGGAGATGCCGGCTCTGATGGTAAAGACGGTAAAGACGGCAAAGATGG
TGCTGATGGTCCAAGAGGATTCAAAGGAGCCAATGGCGAAGATGGTGCTG
ACGGCAAAAACGGTGCTGATGGTAAAGATGGTGCCAAAGGAGCCACAGGA
CCCAAAGGACGCGACGGTATGAAAGGAGCCAACGGCAAAGATGGTGCTGA
TGGTGCTGACGGTGCTCAAGGACCAAAAGGACAAAACGGTGCTAATGGAC
AAGATGGTGCTGATGGTGCTAACGGTGCTAATGGTGAAGATGGTGCCAAA
GGAGATACTGGAGATCAAGGACCACAAGGGGATGCTGGAAATGATGGTGT
TCCAGGAGGTGCCGGACCACGAGGACCACAAGGAGACAAAGGAGACAAAG
GAGCTGATGGACCAGCTGGAAGAGATGGAGCTAATGGCGCTAAAGGAGCT
GATGGTGCTAATGGACAAGACGGTGAAGATGGTGAAGACGGTGCTCCTGG
TGCCCCTGGTGCCCCAGGACCAGCTGGACCAAAAGGACCCAAAGGAGATG
ATGGCAGGAAAGGAGACAACGGCAAAGATGGTGAAGATGGCAAAGATGGA
ACTGATGGTGCCAAAGGTGGTCCAGGACGAAAAGGACCAGACGGTGACAA
AGGACCAAAAGGAGACAAAGGACCAAATGGTTCTGATGGTAAAGATGGAG
CTGACGGCACAGATGGTAAAGATGATATCTTTGTCCGAAACTACGTTCAA
TATATCTtcgatgaaaagaaaacaacagcTTCCAGCTTCCCAGAACTTAT
TGCTTTCGTCCAACAATACAGAAATTGTGATCACTGCCGTGGCCCCAAGG
GAGACCGTGGAGCCACAGGAGCTGACGGTAACAAAGGAGCAACAGGACAC
CAAGGACCCCGAGGACCAAAAGGATCAACTGGATCACAAGGAAACAAAGG
AGCACAAGGAGACAAAGGAGCACAAGGAGATGCTGGAGCTCGTGGCGAGA
GAGGAGAGCCAGGAGAGCCAGGAGAACAAGGACCAGTTGGACCAAAAGGA
CCAACAGGAAACAGAGGACCTGCCGGAGACTCCATCCCAGGAGACAAAGG
ACCAAAAGGACCAACTGGAGATAAAGGTGCTACAGGCCCACAAGGACCCA
AAGGAGACAAAGGAGATGCCGGCTCTGATGGTAAAGACGGTAAAGACGGC
AAAGATGGTGCTGATGGTCCAAGAGGATTCAAAGGAGCCAATGGCGAAGA
TGGTGCTGACGGCAAAAACGGTGCTGATGGTAAAGATGGTGCCAAAGGAG
CCACAGGACCCAAAGGACGCGACGGTATGAAAGGAGCCAACGGCAAAGAT
GGTGCTGATGGTGCTGACGGTGCTCAAGGACCAAAAGGACAAAACGGTGC
TAATGGACAAGATGGTGCTGATGGTGCTAACGGTGCTAATGGTGAAGATG
GTGCCAAAGGAGATACTGGAGATCAAGGACCACAAGGGGATGCTGGAAAT
GATGGTGTTCCAGGAGGTGCCGGACCACGAGGACCACAAGGAGACAAAGG
AGACAAAGGAGCTGATGGACCAGCTGGAAGAGATGGAGCTAATGGCGCTA
AAGGAGCTGATGGTGCTAATGGACAAGACGGTGAAGATGGTGAAGACGGT
GCTCCTGGTGCCCCTGGTGCCCCAGGACCAGCTGGACCAAAAGGACCCAA
AGGAGATGATGGCAGGAAAGGAGACAACGGCAAAGATGGTGAAGATGGCA
AAGATGGAACTGATGGTGCCAAAGGTGGTCCAGGACGAAAAGGACCAGAC
GGTGACAAAGGACCAAAAGGAGACAAAGGACCAAATGGTTCTGATGGTAA
AGATGGAGCTGACGGCACAGATGGTAAAGATGATATCTTTGTCCGAAACT
ACGTTCAATATATCTtcgatgaaaagaaaacaacagcTTCCAGCTTCCCA
GAACTTATTGCTTCATGCAGCCTCATCAAGAAATCTGCTCAATCTGGAAT
CCGTGTCAGTTTCAATGCCGAAGCTCGTCTCGATTGCCCAGTCCACGAAT
ACTGTTGTGTCCAATACGTGATCAAGGTCGACCACAAACAATGTGCTTCC
ATTCCAGTTGCAAGATCAATCATCGGTTACGGATACCCCAAGACTCTCTT
CAGTGACGATATCACCGTTGAAGGAACATGCCAAGGATTTGGAAAAGGAT
CTCGCAACATCGAGGTTCATGCCCAAAAATGCTGCAAGAAACCAGGTGAC
TGCAAAGTCCTCCCAAAGAACCTTTACACTGGTTCCCTTGATGCTTCTCG
TGTCTTCGTTACCGAAGTCTAATCATGCAGCCTCATCAAGAAATCTGCTC
AATCTGGAATCCGTGTCAGTTTCAATGCCGAAGCTCGTCTCGATTGCCCA
GTCCACGAATACTGTTGTGTCCAATACGTGATCAAGGTCGACCACAAACA
ATGTGCTTCCATTCCAGTTGCAAGATCAATCATCGGTTACGGATACCCCA
AGACTCTCTTCAGTGACGATATCACCGTTGAAGGAACATGCCAAGGATTT
GGAAAAGGATCTCGCAACATCGAGGTTCATGCCCAAAAATGCTGCAAGAA
ACCAGGTGACTGCAAAGTCCTCCCAAAGAACCTTTACACTGGTTCCCTTG
ATGCTTCTCGTGTCTTCGTTACCGAAGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1825482..1827580 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1282-1641:1740 |
| Aaloc | 124-1281:316 |
| Aaloc | 1-123:1 |
|
