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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:149937..154485- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010674 ID=XLOC_010674|Name=XLOC_010674|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4549bp|location=Sequence derived from alignment at sc0000112_pilon:149937..154485- (Clytia hemisphaerica_ch_hm2_pilon)
GAGCTATTTACGGGAGTCACAAACCTCGTTGAACATCCCATTGCTAAAGA
TGCACCTAGTACGTTCCCCATTCAATACATAATGTTAGCAGAATTCTCTT
CATACTTTGACCAAAATCATTGTGTTTTTTTGTTACTTCTGGGTCTTTAT
TTAACGCTTTTTATTTCTTTCGTTCTTCGTATTTAAACTATGAATTGAGA
AAAGTGTTTTGTTGGCTTTCTAATAGTTTAGCGAGCCGGGGATCTTTCTC
ACAATCTAACGACCATAGTCAGAAAATTGATTTTTGTATCTGAACATAGA
AGTTATGTTTTAGATTCTTTAACACTTTTAACAAAGAATTGCCTTTTATA
AATTGCTTTTTAATCAAAACCCTTAGAGTAATTTTAAGAACTTGATTGCA
AAAATGACGTTATGAACTTTAAAAAGACGTTAATAGTTGCATCACCTTCT
TTTATAAAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTTTCGAT
GTTTTTTCAAACTGTCTATAAAGAATTGAACTGTTTAAAATTTTTGGGGA
AAAATTTTCTAAATTAATGCATCAAAAGTTATGGTTGTTTTTCTATAAAA
AATTGAGATGGAAAATTGGTCAAAAAGCACTATTTTCAAGATTTTGAAGT
AAATAAGCTTTTAGAAAAATTTTCCGAAAATATAATTTTAGTTCGATAAA
AGATACACCATCTAGCACAAAAAAAAATTAAAAATGTTTTTTCCTCGCCG
AAACTAAGCTCTTCAAAGTTGAAATACTCTTCTTCGCAAAAGTCATTTTC
TTCTTCATCAAATGTTTTCATTGCGATTTTTGAATTTTCAGACTCGCGGA
TAGTTGGCCTAACAGAAAATGTATAACATGTCAAAGTTTTCAGAGCCTAT
AAGTGGCTAAATTTAACGAGTAGATAATTTCGCGAGACTTAATTTTTGCG
GGATTTATTTTCGCGAATTGGTCCCTTTTTCATTTTTTGACCTAGGGTTT
TTGTCAAAATTTATGGTTTAAAATTTTCGCGAGCATAAATTTTTTCGAAT
TTTCGGAAAAAACTCGAGAAACTCGAGAAATATATAATCCTCGCGTCCAT
TTTGTCCACTTGAGCTACTTAAAAAGTTCAAATTGTTCAAGAATTAAGTT
TCTATTATTTCCATTTTTCAGGTCAGCCGAAGTCCATGCCCAACATGCCG
GTGTTTTTGACAAAGAAAGAACGGAAGAAGATACGCACACAGAGAAGGCG
TGAAGAAGAGAAAGAGAAAAATGTGAAAATCCGTCTCGGTCTTGAACCTC
CCCCGCCGCCCAAAGGTTTCTGACATTGATATTTTCAAGGTTGCCCTGAA
TCAAGTCAAATGTAGAGCGCTCTAATCGTGCTGTCGACTTCAAATTTCGT
ACGAATAAAGGCCGGTCTACCCTTGCGTGCTATCGCACCTTTTGGCTTCA
ATACTTTTTGCTTGGAAAAAAAATTACTTCTTAAGAATGTAGTGCGCACT
TGAAAAAAAAGTTGAATACATTTCAACTTTTTCGACCGTTACGTCAGATC
GTGCCAATGGAATTGTTTCATTTTTCTTTTGACCAATAGCGTGGAAGCTT
TGCTCGAAAAAGTGCGATCGCAGCGCGCGCAAGTGGAGACCGCCCTTTAG
CCACACGAAGTTTGACGTGGTCAACACGATTAGAGTGCTCTTCTACGTCA
AAATTTGAAACTTATGGAAACTTCTTTTTGGACCATTCGGTATTGTCTGC
TTTAAAGTCACCGAACTCTAAATTAAGATTGGAATGAACATTTTCGATGG
AGAGTGCCTGTGGCTGTGTCTAAAAACGGCTGACTTTTTTTAATCGAGGG
AATCTACGCTGTGTTGCAAACTGGTAGGCGGTTTTGCCTTCACTAAATAA
TGATTTAGAGTTTGGTGCGAAAATCATGCCAGAGGCGTTGTGTATGCGAG
CTTTCAGTGAGAAAAGCAACAACTTTTCTCACTCACTCCAACAATTTTTT
ATCGGTTGTTCGAAATCTCTTGAATTTAGATCTCGTATTTTCTTCACAGT
GAAAATTTCCAATTTGATGAGAGTGTTGGCATCAGAAGCTGTTCAAGATC
CTACAAAAGTTGAAGCACATGTTCGTGCACAAATGGCTGCCCGACAAAAG
TAAGTCATCTTAGGTCAATCATTCAAACTTGTAACGAAGTTACTTAAACG
AAAGTAAAATTATAGAAGATTATAATTTATTATAGGATTTTTTCACTTTG
TAATATTTTGTTCTTTTTTATGTGAATGTGGATGTCAACGAAAGTTACCA
TGAAAACTGTCGGCTTACACAAAACCTTTCTCCCTCTGAGAAGCACCCTA
TAAAGCGCATTGCCATTCTAAGGGTTGTCTGACCCCCGGCTGAATGAATA
GCTTATATTGGGTAATCTATTTTTAGTGATAAGTAATTGAGAGCTGAGAG
AGTAGGTATACTGCTCCATCTCAGGATTCGATCTTCCTACTCTAGCACTG
ATAGAAAAAGGGGATAGACTCTGTCACTCCCGGCTCCACTTATAGCCACC
AGATGAATATACTCACTTTTTACTTTAACTTTCCATAGAAAACACGAACA
GGCGAATGAGGAGAGGAAACTAACAAAAGAACAACGTACTGAAAAGAAGA
TCAAGAAGTTAAAAGAAGACACTTCTTTGGGTGTTCACATCGCCGTGTAC
AGTCTCCTTGATTTGTCAAACCCTTCCAAAAAATTCAAAGTGGACACCAA
CGCAACGCAATTATACTTAACTGGTTTGTATACCCCTGTATTGTCTGTCT
GTCTGTCTGTCTTTCCCTATCCGTCTGTCTATTAAGAAACTATTTTACTC
TTATGGTTTACTAAAGTACTAAATCTGTTTAAATATCGTAACATTGTGTT
CTTTTCTTATGATAAAAACGGATTTGAAATCAAAGCTCTACCTATTTAAA
ACATTCATCTCCAAATTTGATATCCGTTCACAAAGTATATGGTAGTTTTG
CGTGGAGTGTATTATCCATACAAACTTTAAAGGTTTTCTTTTTATGAGTG
ATATCGTTTGCTTACTCATCGATTTTAATTCACAAGCCTTTTCACATTGA
ATTGACACGAATATGGAGCAAGATTGGCTATGGAAATAGGAAAAGAAAAA
CATTTTTTGCTTATATCATCTTAATATAACAATAGGCAGACACTGTCCCG
ACATGAAATATGTGTCTGATATGAAACGGGAACACTTATGTAAAATTAAA
ACCTTTAATATTCTATTTTAGTGAAATGTATTTTCGTATTTTAGGGAGTG
TCCTGATTACTAAAGAACTAGTACTTGTCATCGCAGAGGGTGGTCCGAAA
TCACAAAAGAAATTCAAGCGGCTCATGATGCACCGTATCAAGTGGGATGA
AGACACAGCACAGGGCAGACGGCAAGATAAAATCGATAAAAAGAAGCATG
AATACAACGTTGAAAAACAAATGAACAAATGTCAACTCGTGTGGGAGGTA
TGTATATAATTCCGGGGAATATTCCTATTAACCCTAACCTGAGATCAGAT
TATGGCTGTTTTCTGCCCACCACTCTAAAGCTCTAAAGGGATGGGTGAAA
ACATACAATCTGACGAATATGCAATCTCGAAATCGTAAGGACCGCGTTCG
TCTAAAAGGACTAGGAATGACAAGAAAGTTGTGTGATTGTGTTTATGAAT
AGGGGGCCGTATCAGTTTTTAACTTTCCGGCGCACAACAAGATTCTTGTT
GTAGAATTTTCTGCGGGAGGACTATTTTCCTCAGATGTATAATTTTCAAG
TGCCTTCAGAGGTTTACCGTGCACGTAAGAAAATTATAAACAGCTGTTAT
CAGGTTAATTAACCCTGAATTCACAAGGTCAATAACGCCTAAATATCTTC
CTTCGTGAACTCGTCAATGCAGCAACTTTGAGATTTAACCCCGGTAACCC
CAACCCCTTTTACACAGCTTTAAGCAACACGTGAGGGGTTTATCTAAAGA
ATCCTGCATTACTAAAAATAGACAAAAAGAACGACAAATTTCATAAAGAA
CGACAAAAATTGCCGTCCACAACCCCGGAAGTGATTACCACCCCTACGGA
TTCATTCCCCTTTGGTTATCACGGGAATTAACTACAGGTGGTCTAAAAGA
ACGAAAAATTACGCATGCGTGTTACAATGCAGGATTTTTTAGAGGAACAG
ATTGCGTATACACCTATTAAGCCTTAGCGATGCGGTTGACTTTTCAGGGA
GATCAACGATGAATTTACTTCTCGGTGCATGGCATTTTAGTCAACCTTCA
ATCATAAAATTCCCGCCAAAGCTACGATTATAACTCATTGACGTCTATTG
ACAAAGATTCATTAAAACTATCAATTTCTGAAATTTTCTTTCCTTTTTTT
CTCAGGGTACGGCAATAGAAAAGACGTTTAGTGATTGGAAATTTCATTTA
TTCAAAACCGAAACTGAAGCTCAAGAGTTTTTGCGGAAATCTAATATTGA
ACATTATTGGAATCTGGCGAAAAGTCGATCACTGTTAGAAGAAGACTGA Coding sequence (CDS) from alignment at sc0000112_pilon:149937..154485- >XLOC_010674 ID=XLOC_010674|Name=XLOC_010674|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000112_pilon:149937..154485- (Clytia hemisphaerica_ch_hm2_pilon)
GAGCTATTTACGGGAGTCACAAACCTCGTTGAACATCCCATTGCTAAAGA
TGCACCTAGAGCTATTTACGGGAGTCACAAACCTCGTTGAACATCCCATT
GCTAAAGATGCACCTAGTCAGCCGAAGTCCATGCCCAACATGCCGGTGTT
TTTGACAAAGAAAGAACGGAAGAAGATACGCACACAGAGAAGGCGTGAAG
AAGAGAAAGAGAAAAATGTGAAAATCCGTCTCGGTCTTGAACCTCCCCCG
CCGCCCAAAGGTCAGCCGAAGTCCATGCCCAACATGCCGGTGTTTTTGAC
AAAGAAAGAACGGAAGAAGATACGCACACAGAGAAGGCGTGAAGAAGAGA
AAGAGAAAAATGTGAAAATCCGTCTCGGTCTTGAACCTCCCCCGCCGCCC
AAAGTGAAAATTTCCAATTTGATGAGAGTGTTGGCATCAGAAGCTGTTCA
AGATCCTACAAAAGTTGAAGCACATGTTCGTGCACAAATGGCTGCCCGAC
AAAATGAAAATTTCCAATTTGATGAGAGTGTTGGCATCAGAAGCTGTTCA
AGATCCTACAAAAGTTGAAGCACATGTTCGTGCACAAATGGCTGCCCGAC
AAAAAAAACACGAACAGGCGAATGAGGAGAGGAAACTAACAAAAGAACAA
CGTACTGAAAAGAAGATCAAGAAGTTAAAAGAAGACACTTCTTTGGGTGT
TCACATCGCCGTGTACAGTCTCCTTGATTTGTCAAACCCTTCCAAAAAAT
TCAAAGTGGACACCAACGCAACGCAATTATACTTAACTGAAAACACGAAC
AGGCGAATGAGGAGAGGAAACTAACAAAAGAACAACGTACTGAAAAGAAG
ATCAAGAAGTTAAAAGAAGACACTTCTTTGGGTGTTCACATCGCCGTGTA
CAGTCTCCTTGATTTGTCAAACCCTTCCAAAAAATTCAAAGTGGACACCA
ACGCAACGCAATTATACTTAACTGGGAGTGTCCTGATTACTAAAGAACTA
GTACTTGTCATCGCAGAGGGTGGTCCGAAATCACAAAAGAAATTCAAGCG
GCTCATGATGCACCGTATCAAGTGGGATGAAGACACAGCACAGGGCAGAC
GGCAAGATAAAATCGATAAAAAGAAGCATGAATACAACGTTGAAAAACAA
ATGAACAAATGTCAACTCGTGTGGGAGGGAGTGTCCTGATTACTAAAGAA
CTAGTACTTGTCATCGCAGAGGGTGGTCCGAAATCACAAAAGAAATTCAA
GCGGCTCATGATGCACCGTATCAAGTGGGATGAAGACACAGCACAGGGCA
GACGGCAAGATAAAATCGATAAAAAGAAGCATGAATACAACGTTGAAAAA
CAAATGAACAAATGTCAACTCGTGTGGGAGGGTACGGCAATAGAAAAGAC
GTTTAGTGATTGGAAATTTCATTTATTCAAAACCGAAACTGAAGCTCAAG
AGTTTTTGCGGAAATCTAATATTGAACATTATTGGAATCTGGCGAAAAGT
CGATCACTGTTAGAAGAAGACTGAGGTACGGCAATAGAAAAGACGTTTAG
TGATTGGAAATTTCATTTATTCAAAACCGAAACTGAAGCTCAAGAGTTTT
TGCGGAAATCTAATATTGAACATTATTGGAATCTGGCGAAAAGTCGATCA
CTGTTAGAAGAAGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:149937..154485 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 691-834:145 |
| Aaloc | 490-690:1254 |
| Aaloc | 304-486:1961 |
| Aaloc | 205-300:2499 |
| Aaloc | 61-201:3377 |
| Aaloc | 1-57:4550 |
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