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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000255_pilon:111563..116198+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010619 ID=XLOC_010619|Name=XLOC_010619|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4636bp|location=Sequence derived from alignment at sc0000255_pilon:111563..116198+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagTATGAAAGATCATTACCCTGCCAAGAAAAGAAGACTAACACTAAG
CTCTAAAACACCAACACGAGTTACTCCAAATGGTAGTAGACCTTTATGTA
AGTGCATATGTCAAGCAGTCTTTGTGTTGTATTTGTTGTACTTTCAATAT
CTCATTCAAGTTACCACATTAATTATATCTTTTTAGACACTGTCAATATC
TTAAATTGTCTTTATGGTAAAACATCATATTTTGCAAAAAGAGCAGAAGG
AAAAATCCTCTTCTAATTTTCTCACATGCAATCGAATTTGGTTTTGAGTT
TCAGCTTAAAACAGCAGAAAATGATATTTCGTAAAGTCGCTAATTCAGCA
AATAGCCTTTTTAAATACTTGAAATTTCTATATAATTTTGTTTGGTGTAT
TTTATCATTGTCATTATCAAGGATTCTTATGCTCAACTCTGATCCTTTCC
TTTCAGATAGCCAGATTGAATCACCGAAAGTCAATGAAATAACACTGCCA
AAGAAGAAACATAGAAGCTCGCCAGCAAGTACTGGTGGCAACCGCTCAAC
TGACGAATCTACTGTTGAAATACACTGGGATAACAATTCATCACAAATAC
AAAGCAAACCGAAAagtgtttattgattttttttttggtttcattCATCA
GGGGGACCTAAAtatgcttttaaaattttttccattattgaaatattttt
gtttaaatgatCAAAGAACCTGGTTAGataaattaacaaattttatttgc
ccgaaaaaacaataatatgtttttcgtggtttttcgtcaaaatcacaaaa
atttgagcccgcaaaaaaattttaaaacttaaaaaccgcaaaaattaatt
cccacgaaatgaaatttcgaaaattaaaaccgcaaaatgcaatttttcgg
atatttttttcgaccgcAAATATTTGTTCCGATAAGGTAGTTCTCATTGT
AATGCAATACGTCTAACATTTTTGGTCTGTGAAAATGGAttataaaataa
caaaatattgtAATCATCTGCAAAAGGTGGCATTTTGAGGTCCCTATCAC
TGGCACTTTGTGGAGCAAAGTGGGGTTCCCTTGAAAATAAGTCAACATAA
AGTTTACATATTAAAAAGGATTCAAATAAATGCattcacacaaaatttca
tcaatggATGACTTTTTGTTCTCCAGATAATGCGATTTTCCAGACTGACA
TTCTGCGGTCCCCCCTAAACAAAGTATAAAAGTTCAATTTGAgaagaaaa
taccaaaaacctAAAACTTTGAGATTTAAGTTACtgggaagaaattttat
aatAGAAGACCttgtaaaaacaccaaaaaaagttttaaaaagtacagaaa
aaaaaaattagagcaAAAGTAAATTTCACGTACATTCTGAGGGGCAAACA
CCTGTATCAATGTTGTTCTTATCTGTATTTGCTATAGGAGGAAGAGGAAA
GAGAAGGAAAGAGACGAATTTATCTTCTCTGATCAAGCAAATTCCTAAAA
CTGTGAGTTACTGTAATTTTACAACAACTTCTAAGGGTAATCAATTGCAT
GATACATGCACACCAAGACAAAGATCCTTAATGAACACCTCCTGTTAGAC
GAGGAGCAGTACCCTCACAGTAGTATTCATGgggtttgatttgattttct
ttctttatggTCCCTTTAGACTTCTTAACCAGTTGTTGCCAAGCTACAAT
TTTCTCGATTTCTGGGTACATAAACTATATCTAAATAATTTGTATTTTGA
AGGTGCTTATCAAAGTTCTGGTCAAGATTGTCAGGGGCTTATAATTCGTG
TTGTACCTCTTTGATAAGTTTCAATATAACACTACTGTAtcccaaaaatt
aatcaaaataattACATCATTCGGAACAGCACAGTACAAATCGACAAATT
CTATCTGTCATGGATTTGCTTTCTAATCAAATATAGCATCTATTTCCTTC
AATCTTTCTTTTCAGCGTAAATCTGTTGAGAGTTGTACTGCAGaagaaac
aaatttttcaacatGGATGCAGCAGAATCTGGCACCAAGCTGcacaagaa
aacaaaattattcaCTCAGACACAATTCATCAAGGTTTGCTAAATTTTAC
CTTAAAAGTCAAGAAGTGAAGTTTCCTTTATTCAAACATTCTGTCAATCA
TGTAGTAAATAGTTTCTACCTCTACCTACCTTAACTAAAATTTTCTCGAA
ACTTCgggattttgagctgtgaaatTTTGTGCGAAATTCCAAATCGCTTT
TAGctataaaattttggggaaatttcccttttttttctaaaatatgacct
tgattgtacatGTTGAGATCAAGGCAAGTCAAGTGCACtttctttttcca
attttagatTATCATGTTCAAGAGGTGCGAAGATTGAAGCATTGGATTTC
AGTGAGAAGATTAAGAAGTTTTTACAAGAAGAAGTTCCTTCTGCTCCCCA
GCCAAGTAAATTTACTTTTGTATTTGTACCCTTTACGTTACGTTACTGTG
GATAATTACGGTTCATATTCCCACCAGtcttgtaattttttatttaatgt
aATAAGCTATGAGTATGAAAGAGGTTTTTGTCTAGCTTAAAAGATTTGAA
CATTATTTAATTGAACTCCTAGATTTTTATAGCTCAATTACAGTTTGACT
GGTTTATCCCAAAGAAACTCAGGTTTAGTTTAATTTTACCGAATTCTCTT
TCAGGTGTAAACAGAGAGAGTCCCTTAAGCTTACGGTATGGTATATGTTT
GTGATTGAATCCAATGAAATTcagaattgttttgaaaagattattATGTC
CATAATAATGAATGGTTGTCAGGATATTCGGGAAAATACGTTTCTTCAAT
TATTTATTGTTGTTATCATTAATATCATTGTCATATatatgtttaacggt
gaaaaagaatgcggctattatatttttattcttctatttttttatcattg
tcATATAAGTATGACCCCATCAAATTTTACTATACTTGTATTTCTTTCCA
GCTCTTCGCCATGCTTATTGCAAGCCCAACCCAAGACGCATTCGCCGAGT
TACTTTTCGAATAGTTCTGCGGACAGTCTTCTTAATTTTGACAATTTAGA
AGATTCCTTACTTGCCGGTATCGATTCAACTGCAGCTTCTTCTAAAACGC
CAATCCGTAATCCACGTAACATACCCACCCGGAAAACGCCATTGCGATCA
TGCCGATCCAGGTCAAGCACGCCCGTTTTAAAACGTTCAGCTCGTAAGCA
AACCACACGCCCCATGCCTAACCTATACACAGTCGATGAGCAAAAAGACT
CTGGGATTTCAACAGGAAGTAAAAACCAACCCTCTGATAAATGTTCGAAT
GCAGAAAGCGAATCAAATAAAGTAGATACTAATAATAATCAATGCattaa
taaaaaagacaaacGACAATCTCCGTTAATCGGAATCGATTTTGATGATA
ACGATGAGATCGATCAAATTTTATCGACTCAACCCGATATTTTACTAAAG
GATCCCATTAACACTAATCTATCGAAGGTCTTTGATAAGGTGAAAACCGA
ACCTGATACAAATATACCAAATAATAACAAAAGTAAGTTGAAGCTTCGAA
AACGAACTACACCTATACAAACTAATAAACCAAAGACCATTACTACTACA
CCTGACCTATTAGATAACGATTTTGACGGGTTCGATGAACTATTGGCAAC
TTTTGATATGGGCGATGCTGCAGAAATCAAATGCAAATCTCAAGAAATCA
CACCAGCTCGTCGTCTCACCGAATCGCAACGAAAGTTAAAAACCAAATGC
CATACTTCGCCCTTACCACTCAATaatcttcaaaagaaaattatcgACCA
AAATACAGCTTTTATCCCTATATCCAAACCCTCAGGATCAGCATCTACAA
GCACTAACAAACTAGACACTGATATGCAGACTCTTTCTATTAAGTCACCA
GTCGTGTGCAAGAAAACTGGCTTCAATGTTACCAGATCTACCAAGAATGT
ACCAACGAAAACAGGTCCTCAAAATGGCTCCTTTGTAAGGAAAAATATGG
TGACTACAGCCTGTCGAAAGCCGTTCGTTCCACCTAAAGTGTCTGTTTTC
AGCTCGACTCTATCGAACTCAATGGCTCAAACTATGGCATTGGAACTATC
AGCCATTGAAGGGAAAATGCCTGGTGGTGATCTGATGGAAGCATCGACGA
CAGTCGCACCAGGTAGGGCCATTGTCTCTTGTACTAATAAAGGGTTAGTT
GAATCATAAGATTGATGTTAGGATTTTGTATTTGCTAGTTTAACTTTCAT
AGTAAAGTGTTTTGTTTACTTCTTGGTTTTGATAATTCGTGCTCGTACCT
AGATTATCATccagaaattttgatttgaactGTTGCCCATTTCAAACAAA
GATCCCAAATTTATAGGGAAGTGGTCAATATAGCCTTCCTCAAAGGTTGT
TAcaatttctttgtaatatgTTCAATTGGTATAGATTCAAAACCGACCAA
ATATTTTTCAGGAATAACATCGAAAGCATTCGACTGCTTTTCATCCACAC
AGAAATGCACCATGgaagaaattgaacaaaaacgaaaatttgCACAGATG
AAACTGCGTGAACGCTTGAGAAGAAAACGAAAATAG Coding sequence (CDS) from alignment at sc0000255_pilon:111563..116198+ >XLOC_010619 ID=XLOC_010619|Name=XLOC_010619|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3810bp|location=Sequence derived from alignment at sc0000255_pilon:111563..116198+ (Clytia hemisphaerica_ch_hm2_pilon)
atgagTATGAAAGATCATTACCCTGCCAAGAAAAGAAGACTAACACTAAG
CTCTAAAACACCAACACGAGTTACTCCAAATGGTAGTAGACCTTTATatg
agTATGAAAGATCATTACCCTGCCAAGAAAAGAAGACTAACACTAAGCTC
TAAAACACCAACACGAGTTACTCCAAATGGTAGTAGACCTTTATATAGCC
AGATTGAATCACCGAAAGTCAATGAAATAACACTGCCAAAGAAGAAACAT
AGAAGCTCGCCAGCAAGTACTGGTGGCAACCGCTCAACTGACGAATCTAC
TGTTGAAATACACTGGGATAACAATTCATCACAAATACAAAGCAAACCGA
AAaATAGCCAGATTGAATCACCGAAAGTCAATGAAATAACACTGCCAAAG
AAGAAACATAGAAGCTCGCCAGCAAGTACTGGTGGCAACCGCTCAACTGA
CGAATCTACTGTTGAAATACACTGGGATAACAATTCATCACAAATACAAA
GCAAACCGAAAaGAGGAAGAGGAAAGAGAAGGAAAGAGACGAATTTATCT
TCTCTGATCAAGCAAATTCCTAAAACTGAGGAAGAGGAAAGAGAAGGAAA
GAGACGAATTTATCTTCTCTGATCAAGCAAATTCCTAAAACTCGTAAATC
TGTTGAGAGTTGTACTGCAGaagaaacaaatttttcaacatGGATGCAGC
AGAATCTGGCACCAAGCTGcacaagaaaacaaaattattcaCTCAGACAC
AATTCATCAAGCGTAAATCTGTTGAGAGTTGTACTGCAGaagaaacaaat
ttttcaacatGGATGCAGCAGAATCTGGCACCAAGCTGcacaagaaaaca
aaattattcaCTCAGACACAATTCATCAAGatTATCATGTTCAAGAGGTG
CGAAGATTGAAGCATTGGATTTCAGTGAGAAGATTAAGAAGTTTTTACAA
GAAGAAGTTCCTTCTGCTCCCCAGCCAAatTATCATGTTCAAGAGGTGCG
AAGATTGAAGCATTGGATTTCAGTGAGAAGATTAAGAAGTTTTTACAAGA
AGAAGTTCCTTCTGCTCCCCAGCCAAGTGTAAACAGAGAGAGTCCCTTAA
GCTTACGGTGTAAACAGAGAGAGTCCCTTAAGCTTACGCTCTTCGCCATG
CTTATTGCAAGCCCAACCCAAGACGCATTCGCCGAGTTACTTTTCGAATA
GTTCTGCGGACAGTCTTCTTAATTTTGACAATTTAGAAGATTCCTTACTT
GCCGGTATCGATTCAACTGCAGCTTCTTCTAAAACGCCAATCCGTAATCC
ACGTAACATACCCACCCGGAAAACGCCATTGCGATCATGCCGATCCAGGT
CAAGCACGCCCGTTTTAAAACGTTCAGCTCGTAAGCAAACCACACGCCCC
ATGCCTAACCTATACACAGTCGATGAGCAAAAAGACTCTGGGATTTCAAC
AGGAAGTAAAAACCAACCCTCTGATAAATGTTCGAATGCAGAAAGCGAAT
CAAATAAAGTAGATACTAATAATAATCAATGCattaataaaaaagacaaa
cGACAATCTCCGTTAATCGGAATCGATTTTGATGATAACGATGAGATCGA
TCAAATTTTATCGACTCAACCCGATATTTTACTAAAGGATCCCATTAACA
CTAATCTATCGAAGGTCTTTGATAAGGTGAAAACCGAACCTGATACAAAT
ATACCAAATAATAACAAAAGTAAGTTGAAGCTTCGAAAACGAACTACACC
TATACAAACTAATAAACCAAAGACCATTACTACTACACCTGACCTATTAG
ATAACGATTTTGACGGGTTCGATGAACTATTGGCAACTTTTGATATGGGC
GATGCTGCAGAAATCAAATGCAAATCTCAAGAAATCACACCAGCTCGTCG
TCTCACCGAATCGCAACGAAAGTTAAAAACCAAATGCCATACTTCGCCCT
TACCACTCAATaatcttcaaaagaaaattatcgACCAAAATACAGCTTTT
ATCCCTATATCCAAACCCTCAGGATCAGCATCTACAAGCACTAACAAACT
AGACACTGATATGCAGACTCTTTCTATTAAGTCACCAGTCGTGTGCAAGA
AAACTGGCTTCAATGTTACCAGATCTACCAAGAATGTACCAACGAAAACA
GGTCCTCAAAATGGCTCCTTTGTAAGGAAAAATATGGTGACTACAGCCTG
TCGAAAGCCGTTCGTTCCACCTAAAGTGTCTGTTTTCAGCTCGACTCTAT
CGAACTCAATGGCTCAAACTATGGCATTGGAACTATCAGCCATTGAAGGG
AAAATGCCTGGTGGTGATCTGATGGAAGCATCGACGACAGTCGCACCAGC
TCTTCGCCATGCTTATTGCAAGCCCAACCCAAGACGCATTCGCCGAGTTA
CTTTTCGAATAGTTCTGCGGACAGTCTTCTTAATTTTGACAATTTAGAAG
ATTCCTTACTTGCCGGTATCGATTCAACTGCAGCTTCTTCTAAAACGCCA
ATCCGTAATCCACGTAACATACCCACCCGGAAAACGCCATTGCGATCATG
CCGATCCAGGTCAAGCACGCCCGTTTTAAAACGTTCAGCTCGTAAGCAAA
CCACACGCCCCATGCCTAACCTATACACAGTCGATGAGCAAAAAGACTCT
GGGATTTCAACAGGAAGTAAAAACCAACCCTCTGATAAATGTTCGAATGC
AGAAAGCGAATCAAATAAAGTAGATACTAATAATAATCAATGCattaata
aaaaagacaaacGACAATCTCCGTTAATCGGAATCGATTTTGATGATAAC
GATGAGATCGATCAAATTTTATCGACTCAACCCGATATTTTACTAAAGGA
TCCCATTAACACTAATCTATCGAAGGTCTTTGATAAGGTGAAAACCGAAC
CTGATACAAATATACCAAATAATAACAAAAGTAAGTTGAAGCTTCGAAAA
CGAACTACACCTATACAAACTAATAAACCAAAGACCATTACTACTACACC
TGACCTATTAGATAACGATTTTGACGGGTTCGATGAACTATTGGCAACTT
TTGATATGGGCGATGCTGCAGAAATCAAATGCAAATCTCAAGAAATCACA
CCAGCTCGTCGTCTCACCGAATCGCAACGAAAGTTAAAAACCAAATGCCA
TACTTCGCCCTTACCACTCAATaatcttcaaaagaaaattatcgACCAAA
ATACAGCTTTTATCCCTATATCCAAACCCTCAGGATCAGCATCTACAAGC
ACTAACAAACTAGACACTGATATGCAGACTCTTTCTATTAAGTCACCAGT
CGTGTGCAAGAAAACTGGCTTCAATGTTACCAGATCTACCAAGAATGTAC
CAACGAAAACAGGTCCTCAAAATGGCTCCTTTGTAAGGAAAAATATGGTG
ACTACAGCCTGTCGAAAGCCGTTCGTTCCACCTAAAGTGTCTGTTTTCAG
CTCGACTCTATCGAACTCAATGGCTCAAACTATGGCATTGGAACTATCAG
CCATTGAAGGGAAAATGCCTGGTGGTGATCTGATGGAAGCATCGACGACA
GTCGCACCAGGAATAACATCGAAAGCATTCGACTGCTTTTCATCCACACA
GAAATGCACCATGgaagaaattgaacaaaaacgaaaatttgCACAGATGA
AACTGCGTGAACGCTTGAGAAGAAAACGAAAATAGGAATAACATCGAAAG
CATTCGACTGCTTTTCATCCACACAGAAATGCACCATGgaagaaattgaa
caaaaacgaaaatttgCACAGATGAAACTGCGTGAACGCTTGAGAAGAAA
ACGAAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255_pilon | genome | sc0000255_pilon:111563..116198 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1792-1914:4514 |
| Aaloc | 1117-1788:3540 |
| Aaloc | 955-1113:3381 |
| Aaloc | 571-948:3003 |
| Aaloc | 541-567:2707 |
| Aaloc | 442-537:2359 |
| Aaloc | 322-438:1966 |
| Aaloc | 259-321:1440 |
| Aaloc | 100-255:459 |
| Aaloc | 1-96:1 |
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