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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000255_pilon:258433..262756+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010616 ID=XLOC_010616|Name=XLOC_010616|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4324bp|location=Sequence derived from alignment at sc0000255_pilon:258433..262756+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAAGAAAGCGAGCTCAAGCAGAAAAGGCACTTTCACCACCAAGAGA
AACAAGTAAGGCTGATACAGACTCAAGAAATAATTCAGCAAGCCCAGAAG
AAATTCCAAGAAAGCGTCAAAAACAAGAGCCTGAAAGTACTGATCAAAAt
ggtaaactttttcaaaaatgttgttaCATTTTAGTAATGGTTGATGGCTG
GTATTGGATACAGTTAATTACTTTAGCTTTCTACACTAGTTGACAATGTT
TATATTGatatgaatattttttccaGCTCAATACAACAAAGTAATAGTTT
GTTGTTGTGTCtagtgaaaattccaagcaGCACTTTTTTGTGGCCATTAT
ACAGCCTcaataattgaaataaatttattttatgtcaaaatatttcaaaa
agatgaAGATAGTGAGCAAAATCAGAATGTATTCTCTCTATGTTATTGAA
AATAGATTCAATTCAatacattttctttttggacctaccctggtggaggt
cctataaattaacctgtgtttgttcgtccgtccgttcgttcgtctgttac
caacttttctcaggattgaatcataggaatcttttgattttcggtacaaa
ggtgcaaaatggtagtggccaaaatgtgacggagcccgattttcaaaaga
aacaattttgggcaaatttgggccaaaaaacggctaaaaaacgggttttt
tggactttgtgaaaagttggatcattaatttttcctgatttttaagtagg
gtaccatcataggtaaaagatggctcaaacagattttggctaaaaaattt
tgttggcgcaaaaaacgcatgtttatctataagaatcactattaataagc
atacatcaatgttcttagtcaaattactcaattttgttatgagatagatg
tttttttgctcatgagggcttacttttgaagaattgtgtgtttagacatg
aaattttggttgctggGCGTGTTTTTGGGccaaattcgaaatttttttat
aagcacattaacaattacttaggtattagcttttctcaagatcggctctt
tcattctttatgattttttgcacaaagatgcataactataaacccttgaa
tttGACGGAgctcaatatttgaaaaaaaatttttgaggtaaatttcagct
aaaaaatgggttttttggacttatttaAATATTGGAcctttttttttatg
actttttgcatgaaaggtaaaagatggctcaagcagatttttgtaaaaaa
agaatttttcagctgaaaaaacgcatctttatctataagaatcaacaACG
AAGgccaaaactcaatttctaagtCAAAAAACGGCCATTGACCAAAGGGC
TTGGAATTTTGCCTGGTGTCATACTtatttaaaatgtgaaaaattcacaa
aataatCAATAAGACTTATCTTCAACTAGGAGGACAGGTGAAATCACCAA
CATATGGTATAGCAACAACAGATGAAACAGAAAACTCCACAAATACCTCT
CCTGACCTTTTACATGACGAATATGATCAACTACCAGACCCTTTAACCCT
ACAAAAAGAATTGAGTGATGAGGGCAAAGCATTTTGGGAAACCGTAACTA
AAGACTATCACCATTTTTCAAACTGGACAACTTTACTACAATATATTACT
GAGACAGAGGTAAATGAACTTCCTTGTATATTTTATATtccttgaaaaaa
taatttatgttgAAGTACCATCTTCTTGGAGCATTATGGATATTTAAAGG
GAtccaaaaaattgttataaaatgAAATGCTTGCCAAAATTTGAAGACTC
TTAGGATATTAGGGTATTCTGCGGTACTAAAAAAGAGGTTCCAGTTTGAA
TTAATATTATTTTTCGCTCAACTTTTCTCTTTTGCCTCATTTTAATTACT
TCTCTTCTTAAGGACAACCTGGAAGCTTCTCAAGCAGTTTACCGTTGTTT
TTTACGCTACTTCCCATATTGTTATGGTTATTGGAAAAAGTTTGCTGATA
TTGAAAAGAGGAATAGTGACATGGATGCAGCAAGAAAAGTGAGTGATATC
TTTTTCTCAATTATAACTTACTATACTAAATCGAAGAGAGATCATTTTAT
GTACATTGCACACATAAAATATATGAAactttcttgtaagaagaaccaaa
tTCTTTTGGAGGTCaagaaaagattctttttgTCACACTTGAATAATAGC
Ttatgatattcaaaattttcttttttaaacagtatatgtaaaatcttttt
ttcttcaacctATTATGATTCAGAACATTTTATAGAGAAGAATCTTCTGT
CTTTTATAGATCTTTGAAGATGGATTGAAGGCCTTTCCTATCAGTGTTGA
CCTTTGGGTTCATTACATCAATTTTCTGATGCaacaaaacaaaggaaaac
CAGAAAAACAGCAAGAAATAAGAGAGTATGTACcatttcagattattttg
ataACACAATTGTGTAAAACTTGTGATTATTATTGTGATCTATATATACT
CAATAAGCAATATCAATCAAGTTTGTTCtcagaattattttttgaaactt
tgaatgTTGTTATTGAATTGTATTGGAAACAATCctacatcatttttttc
ttcattttacttaaaccttttattattattctcttttttaAAGCACGTTC
AAAAGGGCAGTGAACTCTGCTGGTATGGAGTTCAAGTCTAGCAAATTATG
GAATGCATTTATTGAGTGGGAAAACTCTCAATCAAACCTAAAAAACGTCA
CAGAAATCTACGATCAACTCATATGTACCCCTACACAACAGTATATAAAA
AATTGGCAAAAGTAAGACAACCTACATTCATGATTTcctttaaagggata
accagctttttctcattttcagatAATGTTATAAAGTAGGctatttttga
gaagaaaactTACTACACCATATTTTGAGAGAGATGAGAATCACATAATT
CTACCAATTGACATCCTTTATACTAgttggttatttttcaaatcaataca
TTTCAAAGTAAAGTgtaattttatctcattttctgattttcttttgaaaa
ttcacCTCATTTCTTCACCTCAGATTCAAAGTTCATCTTGAGACATACAG
ACCAGGTGAAATTCTCCCTGCAAAGGAATATGGCAAATTGATGAAAGAGA
TGGATGCTTTTCCACCTGGGATGGTTATTGAGGACGACAAATCAGGTAAA
AATTGATGTTACaaccaaaagaaatttatattaTAAGCTGACCGGCAAAT
ATGTAGAATCATAgtaccgggtgtctctgaaaaaacttccccctgtttga
ttcaaaattgcgaaaaagcgaaaaaatatattactgtaacttgatttttt
caaaatcgtttagaggagggtttaacttaagttttggtatatcaaacttt
agaattgcttcattagaccaaaagttatgacaaaaagagtaaaaatatct
ttttcaaaaagagcgaaaaaagacgaaaaaacagggtatcaaatcttttg
ttagaaaaaaGGCACTGAAACTTTCTCTTCTCCACTCAAATAGACTCGCT
AAGCtttggaaatttttggaaaaatttttataaaagtttgtTGCTTGTTT
AAACTTCATGCTCATTAATGAATCCaaaaagagctctaaattggcaataa
aaatcattaaaaacgaataataaaacaaaaaagatgcacagaagttcaaa
agtaaaactttactGTCAATAAAGTACAATGttttcttgtctaatttgat
accctgttttttcgtctttttgcgctctttttgaaaacaatttttttact
ctttttgtcataacttttgatctaatgaagcaattttaaagtttgatata
ccgaaatttaagttaaacccccctctaaacgatttcgaaaaaatcaagct
aatatattttttcaatttttcgcaattttgaatcaaacagggggaagttt
tttcagagacacccggtagAATAACATTACAATACAAAATCTCTAATAAG
AAATTTGTTCATTCAATTATTTCTATATTGCTCACCTTTGGTTTCATTTT
TAGGAGATGAAGAAGGGGAAGTGACTCTTGGTGAAGACGAGGTAAAGAAT
gttcaaagtttattttttgatttgaataataattgatctcatgtttttgt
ttgaatttttataatttctttggCTACAATTTTATCTTCTAGGGTTTACT
CAAAGAATCTTACACAGAAGTCCGTAACAGAGTCCTCAAAGATAGGGAGT
CTGTTTTTCGCCAAACAGCTCAAGAAATTGTCAAACGCTGGCGGTTTGAG
GAATCAATAAAAAGACCTTACTTT Coding sequence (CDS) from alignment at sc0000255_pilon:258433..262756+ >XLOC_010616 ID=XLOC_010616|Name=XLOC_010616|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2166bp|location=Sequence derived from alignment at sc0000255_pilon:258433..262756+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTAAGAAAGCGAGCTCAAGCAGAAAAGGCACTTTCACCACCAAGAGA
AACAAGTAAGGCTGATACAGACTCAAGAAATAATTCAGCAAGCCCAGAAG
AAATTCCAAGAAAGCGTCAAAAACAAGAGCCTGAAAGTACTGATCAAAAt
gATGGTAAGAAAGCGAGCTCAAGCAGAAAAGGCACTTTCACCACCAAGAG
AAACAAGTAAGGCTGATACAGACTCAAGAAATAATTCAGCAAGCCCAGAA
GAAATTCCAAGAAAGCGTCAAAAACAAGAGCCTGAAAGTACTGATCAAAA
tgGAGGACAGGTGAAATCACCAACATATGGTATAGCAACAACAGATGAAA
CAGAAAACTCCACAAATACCTCTCCTGACCTTTTACATGACGAATATGAT
CAACTACCAGACCCTTTAACCCTACAAAAAGAATTGAGTGATGAGGGCAA
AGCATTTTGGGAAACCGTAACTAAAGACTATCACCATTTTTCAAACTGGA
CAACTTTACTACAATATATTACTGAGACAGAGGAGGACAGGTGAAATCAC
CAACATATGGTATAGCAACAACAGATGAAACAGAAAACTCCACAAATACC
TCTCCTGACCTTTTACATGACGAATATGATCAACTACCAGACCCTTTAAC
CCTACAAAAAGAATTGAGTGATGAGGGCAAAGCATTTTGGGAAACCGTAA
CTAAAGACTATCACCATTTTTCAAACTGGACAACTTTACTACAATATATT
ACTGAGACAGAGGACAACCTGGAAGCTTCTCAAGCAGTTTACCGTTGTTT
TTTACGCTACTTCCCATATTGTTATGGTTATTGGAAAAAGTTTGCTGATA
TTGAAAAGAGGAATAGTGACATGGATGCAGCAAGAAAAGACAACCTGGAA
GCTTCTCAAGCAGTTTACCGTTGTTTTTTACGCTACTTCCCATATTGTTA
TGGTTATTGGAAAAAGTTTGCTGATATTGAAAAGAGGAATAGTGACATGG
ATGCAGCAAGAAAAATCTTTGAAGATGGATTGAAGGCCTTTCCTATCAGT
GTTGACCTTTGGGTTCATTACATCAATTTTCTGATGCaacaaaacaaagg
aaaacCAGAAAAACAGCAAGAAATAAGAGAATCTTTGAAGATGGATTGAA
GGCCTTTCCTATCAGTGTTGACCTTTGGGTTCATTACATCAATTTTCTGA
TGCaacaaaacaaaggaaaacCAGAAAAACAGCAAGAAATAAGAGACACG
TTCAAAAGGGCAGTGAACTCTGCTGGTATGGAGTTCAAGTCTAGCAAATT
ATGGAATGCATTTATTGAGTGGGAAAACTCTCAATCAAACCTAAAAAACG
TCACAGAAATCTACGATCAACTCATATGTACCCCTACACAACAGTATATA
AAAAATTGGCAAAACACGTTCAAAAGGGCAGTGAACTCTGCTGGTATGGA
GTTCAAGTCTAGCAAATTATGGAATGCATTTATTGAGTGGGAAAACTCTC
AATCAAACCTAAAAAACGTCACAGAAATCTACGATCAACTCATATGTACC
CCTACACAACAGTATATAAAAAATTGGCAAAAATTCAAAGTTCATCTTGA
GACATACAGACCAGGTGAAATTCTCCCTGCAAAGGAATATGGCAAATTGA
TGAAAGAGATGGATGCTTTTCCACCTGGGATGGTTATTGAGGACGACAAA
TCAGATTCAAAGTTCATCTTGAGACATACAGACCAGGTGAAATTCTCCCT
GCAAAGGAATATGGCAAATTGATGAAAGAGATGGATGCTTTTCCACCTGG
GATGGTTATTGAGGACGACAAATCAGGAGATGAAGAAGGGGAAGTGACTC
TTGGTGAAGACGAGGAGATGAAGAAGGGGAAGTGACTCTTGGTGAAGACG
AGGGTTTACTCAAAGAATCTTACACAGAAGTCCGTAACAGAGTCCTCAAA
GATAGGGAGTCTGTTTTTCGCCAAACAGCTCAAGAAATTGTCAAACGCTG
GCGGTTTGAGGAATCAATAAAAAGACCTTACTTTGGTTTACTCAAAGAAT
CTTACACAGAAGTCCGTAACAGAGTCCTCAAAGATAGGGAGTCTGTTTTT
CGCCAAACAGCTCAAGAAATTGTCAAACGCTGGCGGTTTGAGGAATCAAT
AAAAAGACCTTACTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255_pilon | genome | sc0000255_pilon:258433..262756 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 952-1083:4193 |
| Aaloc | 916-951:4056 |
| Aaloc | 793-912:3075 |
| Aaloc | 625-789:2645 |
| Aaloc | 508-621:2310 |
| Aaloc | 382-507:1913 |
| Aaloc | 154-381:1432 |
| Aaloc | 1-150:1 |
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