|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000255_pilon:349997..352347+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010612 ID=XLOC_010612|Name=XLOC_010612|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2351bp|location=Sequence derived from alignment at sc0000255_pilon:349997..352347+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcTTTGGCGGATGAATTATTAGCAGATCTTGATGACATTGAGGATGA
AGAGGTTACAGCCAATGTTGAGGATAATGGTGATATCCAGGAAATTATGG
AGACAGATGATCTCCAACAACAACAAGACAACTCCAAGTCTGTCAGTCAC
ATTGCACGGCTTCGGGACAGCAATGAGTTCAAAGAGACTTTAGAGAAAAT
GAATTATTACTTAGAGAATCCAAGGAGCCGAGACACTGTGATGGGTCCTG
TTGAGGAAGACCCTGAATACAAATTGATTGTAACTGCGAATAATTTGACA
GcggaaatcgaaaatgaaacaagTATCATTAATAAATATTGTAGGGATAA
CTATTCCAAACGATTCCCAGAGTTGGATTCTCTTGTCACAAATGCCTTAG
AATACATACAGACAGTCCAAGCACTGGGTAATGATTTagattcaaataaa
attgacaatttAGACTTTTTACCGCCAGCTACTCGTATGGTTGTCAGCGT
TACAGCCGCAACCACACAGGGCGAGCAAATCGGACAGAATGAACTGGATA
ATATCAACGAAgcttgtcaaatgaatatggacttAGTAGatgctaaaatg
aaaattttccaatatgTAGAATCGAGAATGTCCTTTATTGCACCGAATGT
GTCGGTAGTTATTGGTGCTTCAACTGCAGCAAAACTTATGGGTATTGCTG
GTGGCTTGACCAATTTATCTAAAATGCCTTCTTGTAATATCATGCTGTTG
GGATctcaaaagaaaacattgtcCGGATTTTCGACAGCTTCTGCACAAGT
GTTGCCACATACTGGATTCATTTACTACAGTGATATCGTTCAGGTAATAT
CGATATTATTGCACCgaattttctcttgtttttgtcaactttcagtTTTA
ACTCTTTTCCAAACTCAGGAGATTTGAGGAGTTTTACATTTTCTGGAATA
AATGATATCTTGTTTTGTTTCTCTTTAGTGATTTTCGATGgggaaatttt
ttaatttgttagaGATACTATATATCGATGTACCTTTACACTTCTCAGGA
AGACGTAAGTGGCAAGAAATAAAGTAATACTCTCTGTGTTCAAACTTCTT
CCGTCTCATACGGATTTCCGTCTTAGTGAAGTAAATAAAGAGGTATTTCC
GTCTCAGGCGAAAAACATTGGTTTGACCACTGACTAGTCTTGTGATAAAA
AAGATGACTTTTCTTCTTATCAGGGTTTACCACCATATTTGCGAAAGAAA
GGAGCTCGATTGGCATCTGCTAAAGTAACATTGGCCGCTCGTATCGATAG
TTTTCACGAAAATCTTGATGGTTCTGCTGGTCGAAAACTCCTAGAAGAAA
TCGAGAAGAAATTTGATAAGCTTCAAGAACCGCCCCCAGTCAAGGACGCC
AAAGCTTTACCACGCCCAGATGACGCCCCACGCCAGAAGCGAGGTGGAAA
ACGGGTCCGCAAGATGAAAGAAAAGTTTGCGATTACGGAAATGAGGCGAC
AAGCTAGTCGCGTGACGTTTGGAGAAATTTCTGAAGATGTTTATCAGCAG
CATGTTGGATTTGGGATCGGCTCCTTGGCTAAGGAAAGTGCTTCGGGTAA
AATCAGGAACCCTAATGTTGATAAGAAGACGCAAGTTTCGATTTCCAAAC
GTTTACAGGTATGGATACTTCTTGTCATTATAAATGAGTGTTGCAACTTT
CCCGTCTTTAGGCGGGAATGCGTCCAGCTGAGATTTTTCACTTTAGTCTT
CTATAAACCTTGGAAGAGCGAAATTCTTAAATGGTGATTGCAACACTGAT
AAATGACTGTTGCATTTACAGTAACATTTAACAGTGTTAGAATTTCTTCC
GATCACAGACAGATTTGCCCCTCAGTGAAGCACATTCCGCTAAAAAATTC
GATTTAAAAAGATCTCATAACAAAAACTTGTGTTTTTTGGTTTTATGTAT
GCTACAAATAATACAAAACGGTATTTTTATGCGAAAAAGGATACGAGGGG
GAGGGTTCTCATTAATACTTAACATTAATTGTcactgatttttcttcttc
tttcacaTAACAGAGAAATTTGGCGAATATGAACCAATCGTATGGTGGTA
AATCAACAGTGCGTGGTCAAGTCTCCGGTACTGCGTCTAGTGTGGCTTTC
ACACCTTTGCAAGGGATCGAAATCGTCAACCCGAAAGCTGCAGAAAAACG
TGTTCAAGAAGCTAATGCTAAATACTTTTCAAATCAAACGGGATTTTTTC
GGGTTAAGAAGAAAGATCAAACGAATGGTGAAAGTGCGACAAAAAGTTCA
GCTTCTTCGTCCTCAGCGACTTTTGCTAAACCAGCACCACTCAATAAATA
G Coding sequence (CDS) from alignment at sc0000255_pilon:349997..352347+ >XLOC_010612 ID=XLOC_010612|Name=XLOC_010612|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3132bp|location=Sequence derived from alignment at sc0000255_pilon:349997..352347+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcTTTGGCGGATGAATTATTAGCAGATCTTGATGACATTGAGGATGA
AGAGGTTACAGCCAATGTTGAGGATAATGGTGATATCCAGGAAATTATGG
AGACAGATGATCTCCAACAACAACAAGACAACTCCAAGTCTGTCAGTCAC
ATTGCACGGCTTCGGGACAGCAATGAGTTCAAAGAGACTTTAGAGAAAAT
GAATTATTACTTAGAGAATCCAAGGAGCCGAGACACTGTGATGGGTCCTG
TTGAGGAAGACCCTGAATACAAATTGATTGTAACTGCGAATAATTTGACA
GcggaaatcgaaaatgaaacaagTATCATTAATAAATATTGTAGGGATAA
CTATTCCAAACGATTCCCAGAGTTGGATTCTCTTGTCACAAATGCCTTAG
AATACATACAGACAGTCCAAGCACTGGGTAATGATTTagattcaaataaa
attgacaatttAGACTTTTTACCGCCAGCTACTCGTATGGTTGTCAGCGT
TACAGCCGCAACCACACAGGGCGAGCAAATCGGACAGAATGAACTGGATA
ATATCAACGAAgcttgtcaaatgaatatggacttAGTAGatgctaaaatg
aaaattttccaatatgTAGAATCGAGAATGTCCTTTATTGCACCGAATGT
GTCGGTAGTTATTGGTGCTTCAACTGCAGCAAAACTTATGGGTATTGCTG
GTGGCTTGACCAATTTATCTAAAATGCCTTCTTGTAATATCATGCTGTTG
GGATctcaaaagaaaacattgtcCGGATTTTCGACAGCTTCTGCACAAGT
GTTGCCACATACTGGATTCATTTACTACAGTGATATCGTTCAGatgtcTT
TGGCGGATGAATTATTAGCAGATCTTGATGACATTGAGGATGAAGAGGTT
ACAGCCAATGTTGAGGATAATGGTGATATCCAGGAAATTATGGAGACAGA
TGATCTCCAACAACAACAAGACAACTCCAAGTCTGTCAGTCACATTGCAC
GGCTTCGGGACAGCAATGAGTTCAAAGAGACTTTAGAGAAAATGAATTAT
TACTTAGAGAATCCAAGGAGCCGAGACACTGTGATGGGTCCTGTTGAGGA
AGACCCTGAATACAAATTGATTGTAACTGCGAATAATTTGACAGcggaaa
tcgaaaatgaaacaagTATCATTAATAAATATTGTAGGGATAACTATTCC
AAACGATTCCCAGAGTTGGATTCTCTTGTCACAAATGCCTTAGAATACAT
ACAGACAGTCCAAGCACTGGGTAATGATTTagattcaaataaaattgaca
atttAGACTTTTTACCGCCAGCTACTCGTATGGTTGTCAGCGTTACAGCC
GCAACCACACAGGGCGAGCAAATCGGACAGAATGAACTGGATAATATCAA
CGAAgcttgtcaaatgaatatggacttAGTAGatgctaaaatgaaaattt
tccaatatgTAGAATCGAGAATGTCCTTTATTGCACCGAATGTGTCGGTA
GTTATTGGTGCTTCAACTGCAGCAAAACTTATGGGTATTGCTGGTGGCTT
GACCAATTTATCTAAAATGCCTTCTTGTAATATCATGCTGTTGGGATctc
aaaagaaaacattgtcCGGATTTTCGACAGCTTCTGCACAAGTGTTGCCA
CATACTGGATTCATTTACTACAGTGATATCGTTCAGGGTTTACCACCATA
TTTGCGAAAGAAAGGAGCTCGATTGGCATCTGCTAAAGTAACATTGGCCG
CTCGTATCGATAGTTTTCACGAAAATCTTGATGGTTCTGCTGGTCGAAAA
CTCCTAGAAGAAATCGAGAAGAAATTTGATAAGCTTCAAGAACCGCCCCC
AGTCAAGGACGCCAAAGCTTTACCACGCCCAGATGACGCCCCACGCCAGA
AGCGAGGTGGAAAACGGGTCCGCAAGATGAAAGAAAAGTTTGCGATTACG
GAAATGAGGCGACAAGCTAGTCGCGTGACGTTTGGAGAAATTTCTGAAGA
TGTTTATCAGCAGCATGTTGGATTTGGGATCGGCTCCTTGGCTAAGGAAA
GTGCTTCGGGTAAAATCAGGAACCCTAATGTTGATAAGAAGACGCAAGTT
TCGATTTCCAAACGTTTACAGGGTTTACCACCATATTTGCGAAAGAAAGG
AGCTCGATTGGCATCTGCTAAAGTAACATTGGCCGCTCGTATCGATAGTT
TTCACGAAAATCTTGATGGTTCTGCTGGTCGAAAACTCCTAGAAGAAATC
GAGAAGAAATTTGATAAGCTTCAAGAACCGCCCCCAGTCAAGGACGCCAA
AGCTTTACCACGCCCAGATGACGCCCCACGCCAGAAGCGAGGTGGAAAAC
GGGTCCGCAAGATGAAAGAAAAGTTTGCGATTACGGAAATGAGGCGACAA
GCTAGTCGCGTGACGTTTGGAGAAATTTCTGAAGATGTTTATCAGCAGCA
TGTTGGATTTGGGATCGGCTCCTTGGCTAAGGAAAGTGCTTCGGGTAAAA
TCAGGAACCCTAATGTTGATAAGAAGACGCAAGTTTCGATTTCCAAACGT
TTACAGAGAAATTTGGCGAATATGAACCAATCGTATGGTGGTAAATCAAC
AGTGCGTGGTCAAGTCTCCGGTACTGCGTCTAGTGTGGCTTTCACACCTT
TGCAAGGGATCGAAATCGTCAACCCGAAAGCTGCAGAAAAACGTGTTCAA
GAAGCTAATGCTAAATACTTTTCAAATCAAACGGGATTTTTTCGGGTTAA
GAAGAAAGATCAAACGAATGGTGAAAGTGCGACAAAAAGTTCAGCTTCTT
CGTCCTCAGCGACTTTTGCTAAACCAGCACCACTCAATAAATAGAGAAAT
TTGGCGAATATGAACCAATCGTATGGTGGTAAATCAACAGTGCGTGGTCA
AGTCTCCGGTACTGCGTCTAGTGTGGCTTTCACACCTTTGCAAGGGATCG
AAATCGTCAACCCGAAAGCTGCAGAAAAACGTGTTCAAGAAGCTAATGCT
AAATACTTTTCAAATCAAACGGGATTTTTTCGGGTTAAGAAGAAAGATCA
AACGAATGGTGAAAGTGCGACAAAAAGTTCAGCTTCTTCGTCCTCAGCGA
CTTTTGCTAAACCAGCACCACTCAATAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255_pilon | genome | sc0000255_pilon:349997..352347 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1279-1566:2064 |
| Aaloc | 844-1278:1224 |
| Aaloc | 1-843:1 |
|
