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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000255_pilon:249332..252674- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010604 ID=XLOC_010604|Name=XLOC_010604|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3343bp|location=Sequence derived from alignment at sc0000255_pilon:249332..252674- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCTCTAAAATTTCCACAACCGAAGCGAAAAACAATCAACAACAGCA
AATCCAAAAATCTGACAAGCAACAAAGAAAGATTAAACGCAAATTCAAGA
ATTTATCATCAGCAGAACACCAATTCTCCCTAGCCAATACAACGCCAGAA
TGGAAAATGCCTGAAGTCAAAAGGAAATGTTTACAGTTGATGACTCCTTC
AACTTCAAATTCATCTACAGCTTGTAAACTTTTCAGTAACATGCTTTCAA
TCAAAACACTACAACAATCAGAACGAGGATCTTATTTGGCAGCTTTTTTT
CGACTTTTTGGTAAAGATAACTCCCTTGAAATTTTGCATTCAAGTCATTC
AAGTGGTGGAGGGGGTTGTTACAGTCACAAAGTCACAAAGTCTAACTTTT
CAAATATGTTGCTCTGTTGCTCTAAAAAGGGTCACTTTTATCGCAAAAAT
TCGGTTTATTTACAGTATTCAAGAGCCAAGTTTATGGTACAGGCCACACC
CCAAACACAAAATTCCCCAAGCCTATATAGTTTTCTAACTTTTCTGGCAG
TGTGGAGATCAAATGATTTAGGTGTTTTTCTTCTCACAATTTTTACAAGC
AGTTATTCTTTCAATGTTTTAGATGACGATTTCATTCAAGACTTTCTATG
GTTGGATAGATGTTTTACCCTTTGCGATAAGGTACTAGTATGTAGTATGT
TGCAACTATTGTTGTGTCGTTTTATATAATATAAAATCGGAGATGTGAAA
TTTTTTAAACATAAATACTAATTGGATAATCCCCTCAAGGGTCTACAGCC
CGGGGGGTACTTAGGCAAAATGGGTGCCGGGTATGTGCGAGCCATAAGGG
TACCTTTTCTCATTCCTCAATAGTCTCTCAAAGAGGTATAAATTCAAAAG
TTAGTCTCTGAAAGGGTCCCAAAAGCTCAAAAATAAAAAATTTCTCTCTC
AAAGGGTGACGATTTCTAAGAATTTTGACCAAAATTTGGTGAAAATCAAA
CCAAAATTTGGAAAAAATGGACCAAAATTTAGGAAAAAGTCTCTCAAAGG
GTCCCAAAATCACCAAAATTTTGTCTCTCAAAGGGTCGATTTTCGATTTT
TGGCTCGGAAATACCCGTCACCTCGCAAACCTAGTACCCCCCCCCCCCCG
GGGTCTACAGTCAGGGAAATCCCTCAATTGCGGTAGTTGAATTTTCATCG
GGAAATCATTTTACTGAAATTGAGAGGCAATCTTGAAAGGAATACCGTAC
AAAACCTGAAATTCAGCACATGAACACAAAATTGAAACATAAATACTCTA
GGTCGTAAACTAAAGTAAAGTTGTTCCCTTAAACCCTGAAATATACTTGT
TTAAGGCAATCTAAAGGGGCAAAAATCAAGAAAAATTGTCCCAATGGTGC
CCCACACTCTCAATGTGAAGCTGCAGCGTAGGAATCACGTTGCAGAGTTC
TTCATCGTCTTTGTCTCCCGTGTAGGAGTAATCAGCTTGATTCCCTGTAT
TACAACGATTCACTTTATAAAGGAGCCTTTGCTCAAAGTAAACGACTCAG
GTAGCTCTGTCAAATGAGGGGAATGGTGTACGTGTATCACCATACTTCTG
TTCTAAAACATTATCAAGGCCTTAAAATTTGATGGACCACTTTAGACAAT
TTAGAATTAATCACAATCTTATTTTATAGTATCTGCTGGCGATGATTTAC
GTTTATTTTCGCAGAGCCAAACTAACAAGAAAGGATTTTACACGTCAAAA
TTTCTTTCTTGCACTGTAAGTCTTTCTTGGCACTTTGGTTTTATCGTTGA
TATGATCGCAGAAATAGACTGAAATTTCATTAATTGACCAGGATTTTAGC
TTCATGGCAAACGGGATGCTACATTTAAATTGACTGACTGTTGTAAAGTT
TACTGTTTAAGAATCCACTGGGGGCTTTCAAAAAATTTATCCATAGTAGA
AATTTCGTGAATTTCGAAAAAAATTGCGTGGTTGCGTGAATTGAGGGTCC
GCTGGGGGGGGGGGGGGTGGCTCATCCACTGTATATAAGGTACACATATG
ATGGACATTCTCGAACCCAGAGCCGCCACTGATTTTTCTGATATATGTTA
GTACACTATCAAAATCATAAAAAGCGAACCAAGTGACTGACGTGAGTTCG
AGTTTTGGACTTTCATACTACAGGAGGAAGAAATCTTAGTTGGTGGGGGA
AAACTTGGTCACTTTTATGAAAATATTTGTCACTTCTCTCTTGAAGTTGA
TGACTAATTTGTCACTTCTCTCCCGACCAATTTTTCCTCTTTAAGGTATC
ACAAAACTGCATATTTCAGGTATATTGCTCATGAAATAGAAGAGGACGAT
GAAGAATTAAAAATGGAGATTTATCCATGGGCTCTTGGTTCAGAGTTGTG
GAGAAGCAAACTTAAAGAGTTTCTATATAAGAGGAACGTGTTTTTACAAC
GAATGAAGTTTCGTGCTGTCGTCAGTAGAACAACCTGTGATGAGGTTCGT
TTTTATGATTTTGAGCTTCAAAATTACTTTAAACGCTTTCTTAGTAACAT
CAGATATAAAATTTTTCTTACTAAGCGGTGTCAGTATGAATAAATTACCG
ATTTTTTTCTGGTCTTATGTCTGTGATCTATTTCCTTTTAACATCCCATG
TTTTTAAGTATCTTTACCAGGTCTTTGTTATTCATGTTTAAAACTATATA
CGATAGTTATCAGAGTGAAGCAGAATGAACTTTACAGAAAGTCTTCCATG
GTCGTTTTATTTGGTTCCCAATAAGGATTGTTTGATAGCTTTGTTATCTA
CATTGTCCTTGTAACTTCACATATTTTTCAGATATTCGATTTATTTCCAA
AACATCCAGCCTGGCAACGTGAGAGAAACGGAAATCATGGGGGTGCCATT
CGATTCTATAATCAAAATTTGGAGAATGAAGTTTTCAGTCCATCAAGAAA
TCAAATGAGGTGTAAAGTATGCCTTAATGGGAAATCACCCATCCGAATCT
CGCATAACACATTTATAAAAGGTATTTAACGTGATAAATTCTCTCAGAAA
TGATGATTACATCACGTCATTACATCAACGCCATTAGATGAGACCAGCCT
TGCGTTGACGTTAAACAAAAGAGCGTTACCAGACTGTTGTCCATCCTCTA
GCGTATCTAGACAAAAAAATTGCATCTTAAGACTGTTTTACGCTTTCTTA
TGAATCTATTTTCTTCATTAATTTTTTTGATCAATTTGATTAGATTGATC
AATTAATTTTCAGCATATCCAGCAAATAAGAACGACATTTACTTCAAGAA
CTCTTCAGTTGAGATCACACTTGACGACGATCACGAAGAATAA Coding sequence (CDS) from alignment at sc0000255_pilon:249332..252674- >XLOC_010604 ID=XLOC_010604|Name=XLOC_010604|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1800bp|location=Sequence derived from alignment at sc0000255_pilon:249332..252674- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCTCTAAAATTTCCACAACCGAAGCGAAAAACAATCAACAACAGCA
AATCCAAAAATCTGACAAGCAACAAAGAAAGATTAAACGCAAATTCAAGA
ATTTATCATCAGCAGAACACCAATTCTCCCTAGCCAATACAACGCCAGAA
TGGAAAATGCCTGAAGTCAAAAGGAAATGTTTACAGTTGATGACTCCTTC
AACTTCAAATTCATCTACAGCTTGTAAACTTTTCAGTAACATGCTTTCAA
TCAAAACACTACAACAATCAGAACGAGGATCTTATTTGGCAGCTTTTTTT
CGACTTTTTGATGGGCTCTAAAATTTCCACAACCGAAGCGAAAAACAATC
AACAACAGCAAATCCAAAAATCTGACAAGCAACAAAGAAAGATTAAACGC
AAATTCAAGAATTTATCATCAGCAGAACACCAATTCTCCCTAGCCAATAC
AACGCCAGAATGGAAAATGCCTGAAGTCAAAAGGAAATGTTTACAGTTGA
TGACTCCTTCAACTTCAAATTCATCTACAGCTTGTAAACTTTTCAGTAAC
ATGCTTTCAATCAAAACACTACAACAATCAGAACGAGGATCTTATTTGGC
AGCTTTTTTTCGACTTTTTGATGACGATTTCATTCAAGACTTTCTATGGT
TGGATAGATGTTTTACCCTTTGCGATAAGATGACGATTTCATTCAAGACT
TTCTATGGTTGGATAGATGTTTTACCCTTTGCGATAAGTATCTGCTGGCG
ATGATTTACGTTTATTTTCGCAGAGCCAAACTAACAAGAAAGGATTTTAC
ACGTCAAAATTTCTTTCTTGCACTTATCTGCTGGCGATGATTTACGTTTA
TTTTCGCAGAGCCAAACTAACAAGAAAGGATTTTACACGTCAAAATTTCT
TTCTTGCACTGTATATTGCTCATGAAATAGAAGAGGACGATGAAGAATTA
AAAATGGAGATTTATCCATGGGCTCTTGGTTCAGAGTTGTGGAGAAGCAA
ACTTAAAGAGTTTCTATATAAGAGGAACGTGTTTTTACAACGAATGAAGT
TTCGTGCTGTCGTCAGTAGAACAACCTGTGATGAGGTATATTGCTCATGA
AATAGAAGAGGACGATGAAGAATTAAAAATGGAGATTTATCCATGGGCTC
TTGGTTCAGAGTTGTGGAGAAGCAAACTTAAAGAGTTTCTATATAAGAGG
AACGTGTTTTTACAACGAATGAAGTTTCGTGCTGTCGTCAGTAGAACAAC
CTGTGATGAGATATTCGATTTATTTCCAAAACATCCAGCCTGGCAACGTG
AGAGAAACGGAAATCATGGGGGTGCCATTCGATTCTATAATCAAAATTTG
GAGAATGAAGTTTTCAGTCCATCAAGAAATCAAATGAGGTGTAAAGTATG
CCTTAATGGGAAATCACCCATCCGAATCTCGCATAACACATTTATAAAAG
ATATTCGATTTATTTCCAAAACATCCAGCCTGGCAACGTGAGAGAAACGG
AAATCATGGGGGTGCCATTCGATTCTATAATCAAAATTTGGAGAATGAAG
TTTTCAGTCCATCAAGAAATCAAATGAGGTGTAAAGTATGCCTTAATGGG
AAATCACCCATCCGAATCTCGCATAACACATTTATAAAAGCATATCCAGC
AAATAAGAACGACATTTACTTCAAGAACTCTTCAGTTGAGATCACACTTG
ACGACGATCACGAAGAATAACATATCCAGCAAATAAGAACGACATTTACT
TCAAGAACTCTTCAGTTGAGATCACACTTGACGACGATCACGAAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255_pilon | genome | sc0000255_pilon:249332..252674 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 823-900:79 |
| Aaloc | 631-819:513 |
| Aaloc | 457-630:1024 |
| Aaloc | 370-453:1665 |
| Aaloc | 313-369:2720 |
| Aaloc | 1-309:3344 |
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