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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:463769..467307- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010581 ID=XLOC_010581|Name=XLOC_010581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3539bp|location=Sequence derived from alignment at sc0000168_pilon:463769..467307- (Clytia hemisphaerica_ch_hm2_pilon)
TATTATCATTCAAAGAAGTTTTTCATATTATTGTGTTTTTATATTTTTAT
TTTAGATGGATCTTCAATCGCTGAAAGACTTTCCAAACAGATTAATAAAG
TTTGCAAGGAAATCAAAAATCTATTGGCAAGTTACAATTCTATGAATCAC
AAAATGTATTCTAGATTCAAAAATGTGGATTACATTGAGGCTCTAAATGT
AAAATCATCGATGTATAACGCTGTCAACTTTGTTTTTCAGGTAGCGAATG
TTTTTTTCAGCTTCTTTTGGTGAACTTATTAAATAGGATATATCCGGGGG
CACTCAATCTGAAAACGACCATACATTCGACCAAAAATTTGACTTCCAAA
ATCAGACCCTTACAGTGCATTCAAAAGTTGGTCGAAAATTGTCAAAAACA
GGCTAAAGATTGATCCTTACAGTGCACTTTTTCAAATTTCAATTTAGTCT
AGACTTTGCTATGAGCTTAGGAGTCACATTTACCTGGGTACGTTAATTTG
GACATGAAATTAAACATAATATTTTTACATTTAGGTTTGGTCGATCACGT
ATGGTAATATATCTTATATAAGTATCACTATAATATCAGTATTATTAATT
TCGCTTAGCGAAAGTATTACGATAGCCTTTCTGCGGTGGCGGGGGAGAAT
ATTTTTGGGGCGAAGATTATGGCGTGGGCGTTTGGCTGCGGGCGTACTAC
GGCAAATATTCTAAAGGTGGACTCACTCACAAAGATAAAAAGTGATAAAA
CAGGGCTTTTCTTAATAAATAAAATACGCTAGTGCAAGAAGTGTAACCAA
GCCTTTGTAAACATTCATCGTGAGAACTTTTAATGGCTGCTTGATTGCAC
ATGCTTTTGAAAATTTTTATCATATTTTCTGGTCTTTTGTAGAGTGTTTA
AAGAGGTTTATATTTGTTTACTACATGTTACTACTAAGTATTTGATGTTT
GTGTAGTTAGTGAATGCACCAATAAATTGATCATGCTCAGTAAGTAGTAC
AAAAAGAGTTAATTTTCCACAACAAACAACAACATTATTAAAACCCTCTC
TTCTCTTCTTCACCAAAACTACAAACAGCACAGGTATGATATTTCTTTCC
TTTTTTCACCAGATAGTTATGTGTTAATAGTGAAACCAGTTGTGACAAAC
AGTCAGTTTTAGCAAGTACTGTGAAGTCGGGTAACTTGCATCAGTGGAGG
GTAACTTGCACAGCCATCAAATGACTGACTGAAATTCAGCAATCATTTTT
GTATAATCAAAACGAGCCTGCCTAGACACTGCCGTACATTGTCATTGTAC
GGTGATTTATGGTGGGTAAGGTGGGGTGTACAGATAATACAGTAGATTTC
AAATTAACCTATTTTCATCGCCGTACAAAAAGGACATTTAAATCCAGCCC
CACCTTACACCACCGCACAATGTACAGCGGTCCCTCGTTAATGATGACAG
TTTTTTATCCGATGAAGTTTGATTGGTGTTCGATGAGTTTGGTTAGTAAA
AGTTCCAGCTTTTCCTCCCCGATGGGATGATAGATATTGGCTCGCTCTTT
AAGCTTTAGCGTGGGCGTCTGCTAATAAGCCTTCGGAATGTAAAAAGAAT
GGGCAACAAGGTAATAAATCAAACTAAACGAGCTTCAATCAAACTTCGCC
GATCTTGATACACCTTTTGCTAATTAGGATTTTCATTTTGAACCATGGTA
CGTTGTTTGTATAAGATTTCCATTTCCGCACTAAGATTCTTGTTACTTTT
CTGGAATCTTTCCCCTATATATTTTTCACGGGATGATCGGCAAGAGATTG
GGGAGGGTTTGTTTAATGGGATGCAGTTTAAAGCAGTTATAAAGGAGTCA
AAGTTTAATCTCAAGGAGTATTATTTCTTTAAAGCTTAAAGTTGATGGCT
AGTTTTTACCTTGCAATTTTCTAGTCCAGAAGCTGGACCTGGAGCTCAAC
TACACTCATTTTTCTTTTATAAGCATAACGTTTATAAGCATACTGAAGCT
CAAATTTCCAGAAAAATTAAGCATATGCTAAGCATACCTTGAGGAAATTT
TAGAATCATAATTTCCCAAACTTCAGAAAATAACAGAAGAATGAAGAAGA
GAATTCCAAACAAAATTCGAATAATTGGTGATTTTATTTTGTTTAATCTC
TTACAAATAACACAACTTGGTCTCTTAAGAATGTACACTATCTAAACTTA
CATATTTTTTTACCAATCAAAAATTGAGATTTACTTAAGCATAGTGAGCT
TCAGCCGAAATTTACTGTATGCTTATAAAAAAATGAGTGTGCTCAACTGC
TTTTTGCCTTTAATGGGCTCTTCCAGAAAATTTCTGTACATGGGGGTGGA
GGATATAGTGTCTGGAGGGGAGGGTAGTAAAAAATCTACAAAATTTGCCT
TGTCCTGGGGGAAGTAAACTTGCTCTCGATGGGATCAACTGATGATGCTT
GTCCGGGGCGGGGAGGGTTAGACCTGCTGTCCGGGCGATCAAAAGTCACA
ATGTCCAGGGGGGGGGGGGATTCCAAAAAAGTGTTTATCCTCACCCCCCC
CCCCCCCCATATTCAAATTTTTTCTGGAAAAGTCCAATGATTTTGATGGT
GGTGGGCCATCATTCATATCAGAAAGCGAAGATAGTATACAACAGATTTT
TCTGACTAGCCATTTTTTTCAATTTTAGATAAATTCTACTGTTTATAAAA
AGAAGTTGATATAAACTTTGCTCAAGTGAAAGAAGTCTTTATCACAAGTT
CCTTCAAAGCACAAAATGAGGTTCCTGGCATCAAAGAATGAAAAGTTCTT
TTTTTTCTTCTTCTTTTTCAAAAAAATTTAAAATTATTTTTCTCAAGTAT
ATTGCAGTTCTCTTAAAGGAATCTTTTTTTTAATGGATTGAGATTTTTCA
TTAAAAAAACAGCGGGTATCTATGACCTGTGTGTACAATACATTGTGTAT
ATTTTGTGTAACGCTTCATTCAAAATGCATAATGGTTGATGTTCAAGTAT
TATGCGAAATTTTCGACTTTTAGTCGTCTTATTTTTTTTATTTTCAGAGA
CAAAGTTCGAACGTTCCAACCATTGTGATTAAATCACTAGTCCAATTTTA
TGTTCGCAAACAAAGGGCAATTGAAGAAGTATTAATCATCAGACAAGAGA
TGGAAGATACAATCTGCAATTGGAAACAACAATTAAGCATATTAATCAAT
CAGACTGCCGTAGAAAAAACTGTTGGAATACAGTTCATTTTACATGAAAG
AGTTTCTAATGTCAAAAGCTTTATTGCAGAGTTAGAAAGACTTTTCGCAT
TTGTATTGAATCCGAACGTCGATATCAACTATATCAATGACGATATTTGG
AAACCCGCTGAACCCAAAGAGAAAATAACCGAATTACAGCACGAAAAAGA
TATCATGACGAATGTAGAAAGTTTTTTTGAAACTGATGAATTCTCGAGTG
AAGATGAATTGACTGACGTGTCGATTTCTTCTGATGATGGAAACACCAAT
CATTCCGATATAGATACAAGTAATTTGTTCTATATTTAG Coding sequence (CDS) from alignment at sc0000168_pilon:463769..467307- >XLOC_010581 ID=XLOC_010581|Name=XLOC_010581|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1464bp|location=Sequence derived from alignment at sc0000168_pilon:463769..467307- (Clytia hemisphaerica_ch_hm2_pilon)
TATTATCATTCAAAGAAGTTTTTCATATTATTGTGTTTTTATATTTTTAT
TTTAGATGGATCTTCAATCGCTGAAAGACTTTCCAAACAGATTAATAAAG
TTTGCAAGGAAATCAAAAATCTATTGGCAAGTTACAATTCTATGAATCAC
AAAATGTATTCTAGATTCAAAAATGTGGATTACATTGAGGCTCTAAATGT
AAAATCATCGATGTATAACGCTGTCAACTTTGTTTTTCAGTATTATCATT
CAAAGAAGTTTTTCATATTATTGTGTTTTTATATTTTTATTTTAGATGGA
TCTTCAATCGCTGAAAGACTTTCCAAACAGATTAATAAAGTTTGCAAGGA
AATCAAAAATCTATTGGCAAGTTACAATTCTATGAATCACAAAATGTATT
CTAGATTCAAAAATGTGGATTACATTGAGGCTCTAAATGTAAAATCATCG
ATGTATAACGCTGTCAACTTTGTTTTTCAGAGACAAAGTTCGAACGTTCC
AACCATTGTGATTAAATCACTAGTCCAATTTTATGTTCGCAAACAAAGGG
CAATTGAAGAAGTATTAATCATCAGACAAGAGATGGAAGATACAATCTGC
AATTGGAAACAACAATTAAGCATATTAATCAATCAGACTGCCGTAGAAAA
AACTGTTGGAATACAGTTCATTTTACATGAAAGAGTTTCTAATGTCAAAA
GCTTTATTGCAGAGTTAGAAAGACTTTTCGCATTTGTATTGAATCCGAAC
GTCGATATCAACTATATCAATGACGATATTTGGAAACCCGCTGAACCCAA
AGAGAAAATAACCGAATTACAGCACGAAAAAGATATCATGACGAATGTAG
AAAGTTTTTTTGAAACTGATGAATTCTCGAGTGAAGATGAATTGACTGAC
GTGTCGATTTCTTCTGATGATGGAAACACCAATCATTCCGATATAGATAC
AAGTAATTTGTTCTATATTTAGAGACAAAGTTCGAACGTTCCAACCATTG
TGATTAAATCACTAGTCCAATTTTATGTTCGCAAACAAAGGGCAATTGAA
GAAGTATTAATCATCAGACAAGAGATGGAAGATACAATCTGCAATTGGAA
ACAACAATTAAGCATATTAATCAATCAGACTGCCGTAGAAAAAACTGTTG
GAATACAGTTCATTTTACATGAAAGAGTTTCTAATGTCAAAAGCTTTATT
GCAGAGTTAGAAAGACTTTTCGCATTTGTATTGAATCCGAACGTCGATAT
CAACTATATCAATGACGATATTTGGAAACCCGCTGAACCCAAAGAGAAAA
TAACCGAATTACAGCACGAAAAAGATATCATGACGAATGTAGAAAGTTTT
TTTGAAACTGATGAATTCTCGAGTGAAGATGAATTGACTGACGTGTCGAT
TTCTTCTGATGATGGAAACACCAATCATTCCGATATAGATACAAGTAATT
TGTTCTATATTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:463769..467307 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 241-732:493 |
| Aaloc | 1-240:3540 |
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