XLOC_010524 (mRNA) -

Overview
NameXLOC_010524
Unique NameXLOC_010524
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000402_pilon:23712..26888-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010524 ID=XLOC_010524|Name=XLOC_010524|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3177bp|location=Sequence derived from alignment at sc0000402_pilon:23712..26888- (Clytia hemisphaerica_ch_hm2_pilon)
TTGACTTTGGCAACACACGAAGTGTTTTTTTATGTTCTGAGGAAAATGGC
TAACAAAAAAGGTAAGTTGGGTAAAATAACTGGCTTTGAAAGAAATTTGG
ATATTTTACGGTTACTAATTATGAAGGTTCTTATATGATAGTCCATTTCT
TTCTTAAGATGTTACTCACCATAGTTTCTGGGGGGGGGGGTCTTGGGTTT
CGATGAACCAAAAGCAAGGGGGGTGTTAAAAGTATGACTTTCCTAAGGGG
GTTGCCAGTTAAGGGGGGGGGGGTCTTCTTACCTAAGACCCCCCCCCCCC
GTCTTCATAGATAAGGGGATCTTCCTTGAATTATGCGAAATTTCAATTTT
TTCATTTATACTAATTTTTTCACTTAGTCGGAATAAAAATAAAGAAATCG
ACTGAAACTAGATGGTGATCGATCTTTCCATATTTTTCAAGGGATTTAAA
TACCATTGTTTTCAAGTCAGAAATATAGCACAATATTTTGTAATGAGGAT
TTGTTTATTTGATTATTTTCAGCGGGGACAAAAATTGAAGAATAATTTTC
CACGGGGACGATATTTTTGCCCATTTTTCTAGTGGGAGGTGGTCTCAATC
ACAGATTTCTGTAAAGCCCGAAGGGCTAAATGTCGTGCTTTAAGCCATCG
CAGGCAAAAAAAGAGAAAGTCGCAAAAATATTGTTGCTAGTATTTTCGAA
AACCCACGAATCTTTTGATTGGTCAAGCGCTGAAACCCTATTGTAATGTC
ACGTGGCCTAGGCAGGAGTTCCTACCTAATACAGTACACTTTTCAGCCAA
AACACGAAATCTAGCCCTTCGGGCTTTATAAATCTATGGTCTCATCGGGT
CTCTGAGAAGGGGGTGTTTAACTGATAATGATGTCTTTAATATTTTTTTC
AGTTGAATAGTAAGGTAACGAAATTAAGGTACAAATAAAAGTTTACTGTT
GACTCTTGCTAATTCGAACTCGAAGGGGGGATCTTATTTGTTCGAATAAC
AGAGAGATTTGTATTAAAGACAGTAATTTAACAGGGTTTTGCCCTGACGG
GAGCTGAGAATAAGTTCGAATAATAGAAGTGTTAATACGCGAGAGTTGAC
TGTCCCGCCTAGACTTCTAAACTAGTTTGATTCAGTCACTAGGATAAATC
TGATGATAAGTTGTGACTGAATAACAGTATTCAAAGGCAAAATTAAAACC
CGCAAATTTAAAAAGTCTTTAAAGCGCCGAAAACGCTATAATATTGTCTA
TGCCATGTGTCTTAGCCTTGTGAATACGGGCTTACTCTCGGGTACCTAAT
AGCCGTCCCCCCGCTAATTAATTTTTCGAAAATTTTCCACCCAGGACATT
TTATTACAACGCCCCCACCCCCGCTTATCAAGTTTTGAGATTCTTTCCAA
CCCCCCCGGCTATTAGGTACCCGAAAGTAGTCAACTAGGTTATTGACTGT
TTATATTTTGACTTATAGGACTGCTGATCGCGACTCTTATCATACTCATC
ATTGTCGTTGCCGTAACTTTAGCTCTTGTCTTCACATTGAAGAAAGATGT
TGACAACAAGAGCTTACCAACAAGTTCCTTTAAAGTCGTACAAACAAAGC
AAGGTGGAATGGAAGGGAAAATCATCAAAGTAACCAGAGATGACGGCGAA
ACAGAGAATGTGTATCGATTTCGGAATGTCCCGTATGCTGAACCACCTAT
CAGAGATTTAAGATGGAAAGCTCCTAAACCAATACAAACACAAAGTAAAA
CATTGAAATATAGTGATCAACAGATCTGGTGCGCTCAGATTAAACCCCCC
AATAATATCCTCAATATAACTGAAGATTGTCTTATATTGACTATCAGGCA
ACCGGAATCTGCAACTCCTGATCAACCGCTACCAGTGCTTTTCTGGATTC
ACGGTGGCGCATTAGCTAGAGGATCCAGCGATTGGTACTATCCTGATGAA
CAAACTTCAGCATCTCTCGGTATGGTTACTGTCTCCGTAAACTATCGATT
AGGAATCTTCGGTTTTTTATCTATCAAAGAGTTATGGTCAACCAATGATG
GCGAGGAAGGACAATATGGCAATTTTGGGATCCTGGATATGATCGAAGCA
TTGAAATGGGTTAAAATGAATATCAAATCTTTTGGTGGTGATCCTAACAA
AGTGACAATCCTTGGTGAATCTGGCGGTGGTGCTGCAGTGTTTTCATTAA
TAACATCACCGCTAACGGATGGTCTTTTTAATAAAGCTATTGCAGCAAGT
GGTTATCCAGTATCTTTAGAAACGACTTTTGAAAGAGCTGATTCGAGATA
TGGTTCCAGTTTCAAAGAGGATTTACGATGTTCAAACGGGAATGATGGAG
ATGTAATGACCTGTCTTCGTGAGAAAACAATGACCAGTATTCTTGACAAG
GATCCTTCAATGATGAGACCCTTAAATGAATCCTCCTGGGTATTCCCCTT
CAATCAAAGACTCAACGATTACCCCATTCGCGTCATTGATGATGAAATCA
TCGATACTCCTTTGGGTTCACCAGGGAAATATCTCCAAAAAGGATTGAAA
GTTCTTATAGGAAATACTGCTGCGGAGTTACCCCCACAAAATGCAACTAA
AACAATCCAAGGACTTGAGGAGTTTCTAAAACCAAGGATTCTAAGTTTCA
CCAATATGGATACTTATGAGGAATTAATGAATCTGTATCGCCAGAAACGT
CCTGAGGATAAAACATCTCCAGCTGTTATAACACCACAGTTGGTTTACCT
CCAGATGGCTGCTGATGTTGTTTTAAGTTGCCAGACGAATGATATTGTCC
ATAATATATCATTAGAATCTAACTTAACGGTGTACCGGTATCTCCATAGC
CAGCCTTTATCGGAAAATCGGAATAACGATAATGAGTTTGAATCAACAGC
GTACCATGGTATTGATACCGATGTTTTATTCGGGATCAAGTATTATTACC
CCGATTTTAATATTACGGACAGCGACCAGAAACTGATTTTGAACTTCCGT
CAAATTGTTAAAGATTTTGTTTATAGTGCGCCTGAATTTGACACCTCCTA
TACAAATAAAACCATTGAGTTTTGGGATGATCAAATCTTGACCTGGGATA
AACCATATCACGAGAAAGAATGTCAAGTTTTAAGAGATAATGGATTTTTG
AAACGAGCTTGGGGACAACTTGGTTGA

Coding sequence (CDS) from alignment at sc0000402_pilon:23712..26888-

>XLOC_010524 ID=XLOC_010524|Name=XLOC_010524|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3540bp|location=Sequence derived from alignment at sc0000402_pilon:23712..26888- (Clytia hemisphaerica_ch_hm2_pilon)
TTGACTTTGGCAACACACGAAGTGTTTTTTTATGTTCTGAGGAAAATGGC
TAACAAAAAAGTTGACTTTGGCAACACACGAAGTGTTTTTTTATGTTCTG
AGGAAAATGGCTAACAAAAAAGGACTGCTGATCGCGACTCTTATCATACT
CATCATTGTCGTTGCCGTAACTTTAGCTCTTGTCTTCACATTGAAGAAAG
ATGTTGACAACAAGAGCTTACCAACAAGTTCCTTTAAAGTCGTACAAACA
AAGCAAGGTGGAATGGAAGGGAAAATCATCAAAGTAACCAGAGATGACGG
CGAAACAGAGAATGTGTATCGATTTCGGAATGTCCCGTATGCTGAACCAC
CTATCAGAGATTTAAGATGGAAAGCTCCTAAACCAATACAAACACAAAGT
AAAACATTGAAATATAGTGATCAACAGATCTGGTGCGCTCAGATTAAACC
CCCCAATAATATCCTCAATATAACTGAAGATTGTCTTATATTGACTATCA
GGCAACCGGAATCTGCAACTCCTGATCAACCGCTACCAGTGCTTTTCTGG
ATTCACGGTGGCGCATTAGCTAGAGGATCCAGCGATTGGTACTATCCTGA
TGAACAAACTTCAGCATCTCTCGGTATGGTTACTGTCTCCGTAAACTATC
GATTAGGAATCTTCGGTTTTTTATCTATCAAAGAGTTATGGTCAACCAAT
GATGGCGAGGAAGGACAATATGGCAATTTTGGGATCCTGGATATGATCGA
AGCATTGAAATGGGTTAAAATGAATATCAAATCTTTTGGTGGTGATCCTA
ACAAAGTGACAATCCTTGGTGAATCTGGCGGTGGTGCTGCAGTGTTTTCA
TTAATAACATCACCGCTAACGGATGGTCTTTTTAATAAAGCTATTGCAGC
AAGTGGTTATCCAGTATCTTTAGAAACGACTTTTGAAAGAGCTGATTCGA
GATATGGTTCCAGTTTCAAAGAGGATTTACGATGTTCAAACGGGAATGAT
GGAGATGTAATGACCTGTCTTCGTGAGAAAACAATGACCAGTATTCTTGA
CAAGGATCCTTCAATGATGAGACCCTTAAATGAATCCTCCTGGGTATTCC
CCTTCAATCAAAGACTCAACGATTACCCCATTCGCGTCATTGATGATGAA
ATCATCGATACTCCTTTGGGTTCACCAGGGAAATATCTCCAAAAAGGATT
GAAAGTTCTTATAGGAAATACTGCTGCGGAGTTACCCCCACAAAATGCAA
CTAAAACAATCCAAGGACTTGAGGAGTTTCTAAAACCAAGGATTCTAAGT
TTCACCAATATGGATACTTATGAGGAATTAATGAATCTGTATCGCCAGAA
ACGTCCTGAGGATAAAACATCTCCAGCTGTTATAACACCACAGTTGGTTT
ACCTCCAGATGGCTGCTGATGTTGTTTTAAGTTGCCAGACGAATGATATT
GTCCATAATATATCATTAGAATCTAACTTAACGGTGTACCGGTATCTCCA
TAGCCAGCCTTTATCGGAAAATCGGAATAACGATAATGAGTTTGAATCAA
CAGCGTACCATGGTATTGATACCGATGTTTTATTCGGGATCAAGTATTAT
TACCCCGATTTTAATATTACGGACAGCGACCAGAAACTGATTTTGAACTT
CCGTCAAATTGTTAAAGATTTTGTTTATAGTGCGCCTGAATTTGACACCT
CCTATACAAATAAAACCATTGAGTTTTGGGATGATCAAATCTTGACCTGG
GATAAACCATATCACGAGAAAGAATGTCAAGTTTTAAGAGATAATGGATT
TTTGAAACGAGCTTGGGGACAACTTGGTTGAGACTGCTGATCGCGACTCT
TATCATACTCATCATTGTCGTTGCCGTAACTTTAGCTCTTGTCTTCACAT
TGAAGAAAGATGTTGACAACAAGAGCTTACCAACAAGTTCCTTTAAAGTC
GTACAAACAAAGCAAGGTGGAATGGAAGGGAAAATCATCAAAGTAACCAG
AGATGACGGCGAAACAGAGAATGTGTATCGATTTCGGAATGTCCCGTATG
CTGAACCACCTATCAGAGATTTAAGATGGAAAGCTCCTAAACCAATACAA
ACACAAAGTAAAACATTGAAATATAGTGATCAACAGATCTGGTGCGCTCA
GATTAAACCCCCCAATAATATCCTCAATATAACTGAAGATTGTCTTATAT
TGACTATCAGGCAACCGGAATCTGCAACTCCTGATCAACCGCTACCAGTG
CTTTTCTGGATTCACGGTGGCGCATTAGCTAGAGGATCCAGCGATTGGTA
CTATCCTGATGAACAAACTTCAGCATCTCTCGGTATGGTTACTGTCTCCG
TAAACTATCGATTAGGAATCTTCGGTTTTTTATCTATCAAAGAGTTATGG
TCAACCAATGATGGCGAGGAAGGACAATATGGCAATTTTGGGATCCTGGA
TATGATCGAAGCATTGAAATGGGTTAAAATGAATATCAAATCTTTTGGTG
GTGATCCTAACAAAGTGACAATCCTTGGTGAATCTGGCGGTGGTGCTGCA
GTGTTTTCATTAATAACATCACCGCTAACGGATGGTCTTTTTAATAAAGC
TATTGCAGCAAGTGGTTATCCAGTATCTTTAGAAACGACTTTTGAAAGAG
CTGATTCGAGATATGGTTCCAGTTTCAAAGAGGATTTACGATGTTCAAAC
GGGAATGATGGAGATGTAATGACCTGTCTTCGTGAGAAAACAATGACCAG
TATTCTTGACAAGGATCCTTCAATGATGAGACCCTTAAATGAATCCTCCT
GGGTATTCCCCTTCAATCAAAGACTCAACGATTACCCCATTCGCGTCATT
GATGATGAAATCATCGATACTCCTTTGGGTTCACCAGGGAAATATCTCCA
AAAAGGATTGAAAGTTCTTATAGGAAATACTGCTGCGGAGTTACCCCCAC
AAAATGCAACTAAAACAATCCAAGGACTTGAGGAGTTTCTAAAACCAAGG
ATTCTAAGTTTCACCAATATGGATACTTATGAGGAATTAATGAATCTGTA
TCGCCAGAAACGTCCTGAGGATAAAACATCTCCAGCTGTTATAACACCAC
AGTTGGTTTACCTCCAGATGGCTGCTGATGTTGTTTTAAGTTGCCAGACG
AATGATATTGTCCATAATATATCATTAGAATCTAACTTAACGGTGTACCG
GTATCTCCATAGCCAGCCTTTATCGGAAAATCGGAATAACGATAATGAGT
TTGAATCAACAGCGTACCATGGTATTGATACCGATGTTTTATTCGGGATC
AAGTATTATTACCCCGATTTTAATATTACGGACAGCGACCAGAAACTGAT
TTTGAACTTCCGTCAAATTGTTAAAGATTTTGTTTATAGTGCGCCTGAAT
TTGACACCTCCTATACAAATAAAACCATTGAGTTTTGGGATGATCAAATC
TTGACCTGGGATAAACCATATCACGAGAAAGAATGTCAAGTTTTAAGAGA
TAATGGATTTTTGAAACGAGCTTGGGGACAACTTGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_010524XLOC_010524-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000402_pilongenomesc0000402_pilon:23712..26888 -
Properties
Property NameValue
Aaloc64-1770:1708
Aaloc1-60:3178