|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000402_pilon:13849..20409+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010515 ID=XLOC_010515|Name=XLOC_010515|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6561bp|location=Sequence derived from alignment at sc0000402_pilon:13849..20409+ (Clytia hemisphaerica_ch_hm2_pilon)
ctaGACCAAGGTATTCTGATGACTTGGGGCAGCGGTGAAGATGGTTGCCT
TGGTCACGGAAACACAAATGACGTCAGCCATGCCAGAGTTGTAGAAGATC
TTGTCGGTTCAACAGTGGCACAGATTTCGTGCGGTTCCGCCCATATGATG
GCTTTGACCAGTAAGTTATCTACCCCATTTTCGTTCTACTTTCTTGTTTG
CGACCATAGTgaagtggtagagcatccggctacggtgcgcaaggttgtgg
gttcaacccccagccgggtcataccaaagatttccaaaatggtacttgat
gcctctctgcttgatgctcaacaattaagagaaggatcaagggtaagtgg
agcaatccagagaGAAAGAGTGGCGGTGTAACCGTAAATCTTTACTCTCC
GGAAAAAATCACTCCCTCAGTTATAATTTCCCAGGAAAAAATGACCCCCG
GAGTAATAATTACCTGAGAAATTATTACTCCCCCGTGGAAAAAATTACTC
CCCTTCAAATTGCAAAtttatttgctctaaatagggGGGAGTGTTATTTT
CCCAGTAAATTATGACTCCCTGGTGAATTCCGGCTATTGCATATTCGaat
taaacattcgatttggaCATTCCAATCAATGAATTCACTTGCTAAGTAGA
GACGTTTTAAAAATGTATGCAAACTGTAATCCATAAACTTTATTGTTGTG
GTTGCTGTAAAAGAAAACCTAGCCATAAAATCATCTACAAGTTAAAGTGA
CCCGTTGTTACCCCAACCCATCCCGTTGAACTGTACCCCTGGTGACGCCA
AGAATATTTTCATCCGTTCGGggaaaaatcaaagaatgcTATCCCCACTG
TAGcgatttttatcttcatttttcttttgaaatattctactCTAAGGACC
CGAATAATAGAGGGGTCCAAATAtaaaagggggagggggtccgaaatttc
tgtaaaatataatagacgggggggttgaataaacggggggggtggTTCGA
AATCAGCATAGTCAAGAAAGATgcctttttattagaattttttttttgaa
ttaaatttcaagaattatttcaaaataaagaaaacagtgTTGCAGTGTCA
AGATGTAgccaggtttttaaaatatctcTCAATTTTCTAACTCAAGCAAA
TCGCACTCAAGAAAACTGAAAGTTTAATGTCAAAATAACAGTAAAAGTTT
ccatattgtttttgtttttggaaaCCGAATGTTGATCGTGATCTATGCCA
GTTTTTTGGTATACTTTCAGGGGAGTAAAAATTTCCCGAAGGGAGTCTTT
ATTTTCGCGTAAATTTGTACTCCCGGAAGTAATAATTTCCTGGGAAAAGA
TTACTGGGGAGTAATTATTTCCCAGTAAATAATGACTGGAGAGTATAAAT
TTTGGGGAGTAATATTTTACTGTGACAGCGGCCTtgcctaccttcgggta
gatagctatcgaaagaggagccttcgggtcgcctccgactgcggtcgcag
acttacttacttcttgcttgcttgcttgcctaatttaaagaaaagaattt
cagcTAAGCTTCAAAGGACAACTCCACTGTTTTTCTATCATACTAACTGA
CAATGCTTTGTAACCACTTAGCTTATACCACTaacttttcccaaaatttt
gaccCCATCACTTCAAACGGCTCTACGAGGCCCATGAGCAATCTAACCCA
TCACACCTGATAATTTCCTAAGTGAAACAGTTCACTATCGAGCGGCATTT
TGATGTATGCGTAGTTcaatcttttctattttgttttagctGAGCAACAG
GTGTTTGTATGGGGACGAGGCTCTCATGGTAAGATTATCACATATTTCAA
TaaatattctgttttttttttccaaggTCAGTGATATAGTCCTACAGTAC
TGAGAtagaaaaaatcgcaaaatagaaattttcctccttgttttgaattt
tctgattggcTGATCCACTCCGTTTCGAGAAAGCTGATTGGCTGTTTTGG
CtaagtcaaaaaaattgatcTAATTGGCTTGCTTATACTTTTAAACGACC
GGGCCCTGGGACTTTCTTCATCAGGAATCTCAATCTGGGCTTTTGTAATT
TCAATATGGATTAGAGAAATAGCACCTTACAATTACAATTTTTTGAATCG
CAAAACTTAATGGTTTGAGCTCTCTAGCGACAACTTCAGTTCATTTTGTA
TAAAGCTACAAgagcatgaaactgccagtagcagaataaaaaaagtgtct
ttCCTTCCTTCCTTACTGACATCGCTCTTCATATGTATGGAGcattataa
aaaactaaaaactactTACAatgtaatacacgtttttctttaagaaacta
gttttaccaagcagcctcaatatTTCTTAagaatcggccttttgagcctt
aaatgtttcttacatgtttccaaactttttgacataatcagcattctgag
cctcatgtttcttaaaagtgtgtttcttaaaaaaaaaaacgtgtatcctc
TCATCTTTCTACTGGGTTcagttgttaaactttttcttttgtaatgGTAG
TTTTTGGCCTTCATTAACAGCTTTCTTCATATTCCCAGGTAACTTTGGCT
TGAACGACCGTCACAATAGATGTAATCCAACCAATGTCCCGTTGCCCATG
GATACGAAGCCTCGATCCGTTGTCTGTGGAACAGATTGCTCTTTCATTAT
TACTGATAAAGGGGCTGTCTATGCTTGTGGAAACAATAGGTGGGTTTGAt
ataggctgcacgcatcccctctgatatgttttgatatagtgGGTGCGTGC
GTATCCTGTATAtaaaattctcgtccgagagtttCCCCAGATTttgtgtt
ttagagttttagaaacatgattagcttgattagtaagtGAATATGAAAGA
TCTttagatttcattaaatttaaattaaaaattcgaATGGTTAgaggtta
atacaatcattggatttctgaAGCTTTTGAATTGAAACAGGTAACTCTGG
GACAGGAATTTTGAACacacatcccctatatcaaaatcaattctggGGAA
GCACGCAGTCTAGGTTTGGTAATACTTTCTTTACTTTCTttactttcttt
tcaaaaatttgttcaaagtGTACCTTAAAATGGCATATACTAGCCTAACG
CTTaagaattaattttgaaaattttgggtgGATTTAGTTTTGCCATtcag
cagggggggggggggtcggtagtaaaatctcagacataatgacgtttact
acggtggtggtgtgacgaaaaatcgaaaaaaacttttactacccagTGTA
GTTAAATACTTAAAtaggtggtatctatgtgttaaatgttgaaaaaattt
tactacctgggtagttaaactggtaaaattagcaaattttagctatatTA
TTGTAATTCTCTCaattttttggaagacttttccgaaaaaatctaaaaaa
ttttataatttgaaaaaattttctgttggaaagttgtttgctgcaaacaa
aaaatcctcgaaattttttgtcaatataaaaaagaatttgattctaaggg
caaaacatttttgcactaagtgacaaatgtgtcacagaaataatcatttt
ttagctttttttgtaaaatcagtcctaaaagcaaccaaaaagtaggtggt
ctccatgacaaattgtcccaaaaacttttactaccagggtagtaaaatac
ctcttccaagagtctgggtggtggtatgtaaagattcgtaaaaatccttt
tactactcatatatgtctgagattttactaccggacctccccccctggat
tcagCAATCTCACGCGATTGGgcgagttttttttttatcacgAAAATGGC
AAGAATAAAGCTTTTCATGAATAACGTCAaaagcaacgcttacctcgttc
tcaaaatattgctatgatAATTGATTCCCAAAGGAGTTCAACTTGTTATG
CTTCATTTATGTAAAGTAACGCTTGAACCTTGGAAATGGTTTCAAACGAa
gcagtcgttgcactcaaaataatttatgaaaaggcctattcgcgaaatta
aatatcACGACAATTTATCTGATTCCAATATTCTTCTTTCTCCTCAGAAA
CAACAAGCTTGCATTACTCACAGACAATGAATTGAAGAAaggcaattttt
caaaagtggaaAATGATTGCCTCGTTTTCAAGAAGATCACATGTCACCCC
ATATGTGAGCATCGCATTATTTCCATAGCAACCGGTCCAACGCATTCTTG
TTTCTTGACTGGTAAGTTTGCTgtgattttcaatgatttttattgatttg
GTTTTACCTGACGTTTATTCGGCCTAAGATTTTGACGTTTTATAACGTCT
CACAAAATATAGTAATACCAGGGCCAAAAAGTTATTTTGTAAAACGGTAA
TACggtactctcaggtacctaataaacgtGCCCCaacgcttattaatttt
tcgaaaattttccaacccccacggaccttattaggaccccaacgtttatt
aaaattcagaaatttcttATCAAGTATTTTTTAGATAGACTGCTAGATTC
ATGGTATACAGTACTGTACTTATTTTACGAGGGCTTGTTACAGTAATTTT
TACCAGTTATTGTATCGTCAAAAATATGCTACGTTGGAAATATATTCTAC
ACGAAGTCCACCGAAAGAATTTTTCACttattaaactttttaaaaatctt
tttcactgCCCTCTTACCTTTCAAGAGTGACAATATTTTGAGTTCATGTT
TTTTGTAGTTCACTTGCAATGacgtgaaattttgattttctctttGTTTA
TTACAGAATCAGGACTTCTAATCACTTGTGGTGCAAACTCAAGCTACCAG
TTGGGTTACGAGAGGCAAGAAAATGATTTACGACCAGGAATTGTTGAATT
ATCGAGACAAAATCCGATACATTTGATGGATTGCGGTGACCTACATACCG
TGGTTGTCACCTCTGGTAAGACATTGTCTTTATTTAAgtgtacactcttt
tttttgatGCCACGTGGAAACCTCTCTCCAGGGACATTGACTTTCGGGGC
AtcaatagcgagattatgtatctggaattctctacgaaTTGGTTAAAGCG
GCGAGGGAAATCGATGTTTGACGTGTGGCATtatatcgactttgcttata
cggtgttttggtgttttttccgtacagagcaaagtagacaacgacatgtc
gcctttggtgacgacccgcatgggcagccccgcaacggtagccgtagaat
atctccgatacataatctcgctaatgtAGTACGTACGTAGTGAAGGTGGA
TGAGGTAGGTTTAGCAAAATCGTTTATCGTTTAAATGACTGCCAatgtct
acccaaaggtaggcgAGGGTTCACTGGATTGCTTGACTTACCCTTGATGC
ATTAAGAAGAGAAGAATAAGTGCAAAGTCTATGGTATGACCCCACCGAGG
ATTAAACCAACAACCTTGAACACCGTAGCCGAGGTCTTTACCTTTGTACT
ACGATCGCTTAAATACTACAGTGATATTTAAGGAATAACGTTATTGACTT
AGAGTGAAAAGCAACATTGTTCTTTAGAGTGTTAAAGTGCTAAGTGCATG
CATTTTTGTTTGAGCTGATTATATCATGAGATATAATCTGCAGTACTTAT
GTTTGATATTCATtatatttgcatttttttagACGATCAGATCTATAGTT
TTGGTAGTAGCCGCCACGGGCGTTTAGGGCGCCGAACAGATGAAGACTAT
ACTTGGAAACCACAGCtgattgaaattgaagaaaatgacgtcacaatacA
ATCACTTTCAGTTTCGCATCGAACGACGCTGTTGGCTGGAAAAGGTACGA
TTATAACTTGGATTaaaaaaaTGAgcccacttatttcccatccataATAC
ATGGCGGCATGCATGGTTTTAACCCGAATTACAGATTGGAAATAAAATAT
ATCGCTAGATAAAATAGCcgcatgaaaacaaaaaagggcTAGATTCCATC
CACCATTCTAAATACGTttcaaaactcaaaactttttgttttttcttgct
tgGGTTGAAGATTTCGCTCTAGACCGTGGTCTATAATTCTTTCCTGGTCT
CTTATTGCACACCATTTTAACAGTAGGAACagattatttaaaaacattaa
agtAAAAGTGGTATAAAATCTAGTCTGATTTAGTCACACATATACTTTCT
ACATTACATGGAAGCTTTCTTTTATACTTCCCATATAGAAATttagaaag
aaatattttcgtGGAAGCCCTTTGAATTATCTGTTAGTGgtacaaagatt
tttgaaagttaAAGTTATTACATTAcacaggaaattttttttgattaacT
AGGCTATGGCAATGTGtatttccagatctggaaatctAGATTTTTCCTAA
CCAATCCCTAGCTAGGGAGGGTGCAACAGCTCTCTAGTTAGTTATGTAAA
GTAGTTTTGCCTCAGTTTGctaataagaaaatttgaaaattcatgtggtt
gaaattattttactttttttcagttCACAACGCTTCAACATTGACTCCGA
TGAACTATTAA Coding sequence (CDS) from alignment at sc0000402_pilon:13849..20409+ >XLOC_010515 ID=XLOC_010515|Name=XLOC_010515|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000402_pilon:13849..20409+ (Clytia hemisphaerica_ch_hm2_pilon)
ctaGACCAAGGTATTCTGATGACTTGGGGCAGCGGTGAAGATGGTTGCCT
TGGTCACGGAAACACAAATGACGTCAGCCATGCCAGAGTTGTAGAAGATC
TTGTCGGTTCAACAGTGGCACAGATTTCGTGCGGTTCCGCCCATATGATG
GCTTTGACCActaGACCAAGGTATTCTGATGACTTGGGGCAGCGGTGAAG
ATGGTTGCCTTGGTCACGGAAACACAAATGACGTCAGCCATGCCAGAGTT
GTAGAAGATCTTGTCGGTTCAACAGTGGCACAGATTTCGTGCGGTTCCGC
CCATATGATGGCTTTGACCActGAGCAACAGGTGTTTGTATGGGGACGAG
GCTCTCATGctGAGCAACAGGTGTTTGTATGGGGACGAGGCTCTCATGGT
AACTTTGGCTTGAACGACCGTCACAATAGATGTAATCCAACCAATGTCCC
GTTGCCCATGGATACGAAGCCTCGATCCGTTGTCTGTGGAACAGATTGCT
CTTTCATTATTACTGATAAAGGGGCTGTCTATGCTTGTGGAAACAATAGG
TAACTTTGGCTTGAACGACCGTCACAATAGATGTAATCCAACCAATGTCC
CGTTGCCCATGGATACGAAGCCTCGATCCGTTGTCTGTGGAACAGATTGC
TCTTTCATTATTACTGATAAAGGGGCTGTCTATGCTTGTGGAAACAATAG
AAACAACAAGCTTGCATTACTCACAGACAATGAATTGAAGAAaggcaatt
tttcaaaagtggaaAATGATTGCCTCGTTTTCAAGAAGATCACATGTCAC
CCCATATGTGAGCATCGCATTATTTCCATAGCAACCGGTCCAACGCATTC
TTGTTTCTTGACTGAAACAACAAGCTTGCATTACTCACAGACAATGAATT
GAAGAAaggcaatttttcaaaagtggaaAATGATTGCCTCGTTTTCAAGA
AGATCACATGTCACCCCATATGTGAGCATCGCATTATTTCCATAGCAACC
GGTCCAACGCATTCTTGTTTCTTGACTGAATCAGGACTTCTAATCACTTG
TGGTGCAAACTCAAGCTACCAGTTGGGTTACGAGAGGCAAGAAAATGATT
TACGACCAGGAATTGTTGAATTATCGAGACAAAATCCGATACATTTGATG
GATTGCGGTGACCTACATACCGTGGTTGTCACCTCTGAATCAGGACTTCT
AATCACTTGTGGTGCAAACTCAAGCTACCAGTTGGGTTACGAGAGGCAAG
AAAATGATTTACGACCAGGAATTGTTGAATTATCGAGACAAAATCCGATA
CATTTGATGGATTGCGGTGACCTACATACCGTGGTTGTCACCTCTGACGA
TCAGATCTATAGTTTTGGTAGTAGCCGCCACGGGCGTTTAGGGCGCCGAA
CAGATGAAGACTATACTTGGAAACCACAGCtgattgaaattgaagaaaat
gacgtcacaatacAATCACTTTCAGTTTCGCATCGAACGACGCTGTTGGC
TGGAAAAGACGATCAGATCTATAGTTTTGGTAGTAGCCGCCACGGGCGTT
TAGGGCGCCGAACAGATGAAGACTATACTTGGAAACCACAGCtgattgaa
attgaagaaaatgacgtcacaatacAATCACTTTCAGTTTCGCATCGAAC
GACGCTGTTGGCTGGAAAAGttCACAACGCTTCAACATTGACTCCGATGA
ACTATTAAttCACAACGCTTCAACATTGACTCCGATGAACTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000402_pilon | genome | sc0000402_pilon:13849..20409 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 838-873:6526 |
| Aaloc | 676-834:5685 |
| Aaloc | 517-672:4809 |
| Aaloc | 352-513:4099 |
| Aaloc | 202-348:2591 |
| Aaloc | 163-198:1792 |
| Aaloc | 1-159:1 |
|
