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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:1620334..1625246- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010480 ID=XLOC_010480|Name=XLOC_010480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4913bp|location=Sequence derived from alignment at sc0000059_pilon:1620334..1625246- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCTTGATGATTATGAGAATGCATACGAAAATGGAAAGGAAATCAATTC
TGAATCTGATCCTGACGATACACCAATCACCAGTAACGAAGCAATTGAAG
ATTCGAAAAAAAGAAATGGCTTCTTCAACAATGACGGCAATTCAGTTGAA
AATACAATGAATGATTTAAGTTCTTTAGAAGATATTGGTAATGATGATGA
ACAATCAAATGATGAAACAGGTATACACTCATTTATTGTCTTTAGGAATA
AAATTCGATATGATATAAGTCTTTAAGATCTCTGCAAGTACCATCTTCTC
AATTTTGTTAATTTCACAACTCTCATCTGACCTTTAATTATATTTTTCAG
AAGCAAGGTCTCTTTTTTTTTGAAAAATCAAATTTTAGTTTCTATTTCCC
CTATTTTGGAAACAAATTGACATTTCTAATCCCCCTCCCTCAGGTTATTA
AAGAGTAAAATCTGGGAATACTAGTATTTGGACGGGCGATATTGTTTAAT
CCTCCTTTGTCTGCACAACTCTTACTTATTCAATATTTATTGCACGCCGT
AACTTTTAGACAGAAGTTGATATGGTCAATAGAACAATCAAATGACATAA
AACGTTCTATTTTGTTTGATGATTCTTTTTAAAACTACCGCAATTATTAA
ATTGCACTCAGCATTTTTTCATACGTAGTAATTTAGATCTTAAATTTAAA
CATCATCAACCTGGCTTTAACCAATAATTCCATCATTTAGTTTCAGTGAA
AGGCTTCATTGAGAATCTCAACCTCGGATCAACATCTCGTATACTGAAGA
CAATTCCAAAATGGCCCAAAGAATGGGAAGTCAGTTTCAACATCAGACCA
AACAGACAACGATTCAACAACTGGAGAAGTATCATCCATTTCACTACTGG
AGCTAACCGTAATCCTATTGGATCCAGAATCCCAGCTGTATGGTTCCGCC
CAAACACTCATCAACTGTATATCGTCTCTAACATCAATAATAAAGAAGAC
ATATATACTTCCTCAACAATACCAACAAATAGATTCACCAGAGTTGAAAT
CTCACAACGGAAACAGAGTAACGGCAAATATATCTACCAAATCAAAATCA
ACGGTAACAGAGTTCGTTCACTGGAAAATAGAATCCCAACATCATTCAAC
AATGTTTTGATTTATACTCCAAATAAATGGTCAAGAAGCAGTCTGGCTCA
ATTGAGGAAATTCAAATATCAAGGATTTTCTGATGTTAATCGTTTACCAA
GCTCCAATTTATTACCAGCCAGTAATATAATTCAAAGTAAGTAAAAATCT
TTAGCTGTGACCAAGTGGTTATTGATTACTAATTAAGAAGCTTAATACAA
ATGACACTAACTATTTCTCTTGTCGGAGATCTCTAACTTGTACACCCCTT
CACACAGACCCACTAGGACCCCTTGCCGCTCTGAAAAATGGCTAAAATAT
CGTCCCCAGTCGAAAATTATACAATAATCTTTATCCCCGTAGAAAATATT
TATTGTGCTATTTTTAAGCAAGGGAATTCAAATCCACATTAAAAACATAA
GAAAATCAATCCCATCGAGTTTATGGTCCATTATTTTTATCCCTTACCGG
GCTTGTGAGAAAGGGGTGTAACTTGATTATGATTACAGATGACTACGGTG
GCAAAGTGTTAATTTTTAGTAAAGCTAATGACATTACATACATCATTCTT
GCTTTCAGAAAACTCATTCGCTAAATGCCAAGAGCCAAGAACAAGAATAT
ATTGCAGCAAAGCTAGCAATGAATTCCGAACCATTGATGGAACGTGTAAT
AATGAAAGAAATCCGCAATGGGGAGCAAGTGAAACTGCTCTCGCTAGAAT
TGTTGGTAAGTATACAAACTGTTAAGTCTACAGTTGACAAGATATTCAAG
AGTTGCTTTGTGTTAAAACAAAGTTTTTATAAAAAGGCCCAGTCTGGTAG
GCTTTTCTTTCCTTCGATTATTAACCGTTAGAGTTAGAGCGTACCTTAAA
TTGATTTGTTTTGCATAGTTTTTGATCATGTGATCATAAAATAAACCAAT
CCAAATAGTCGAAAATGATAACGTGATTCAAACGTATGCAAATCGCAACT
TTCCTTTTATTCACAACAAAAGACAATTTGACAGTAATACATTACCAGAC
CAGGGTTTTTTATAATGACTTTGTGTTAAAACTAAAACAAGTCCGAAGAA
AGACATCATGGGTTCCTTGATTATTTTTCCCTGGGACCAATTTGTATCAA
AGGTTTACAAGAGTGATACAAAATCTTCAATCGGGAAAATTTATCAACGG
GAATTAATAGACAGTTTTTTTTCCATTACGATCGGGTCTTTTACATGGTG
ATTCTATCAAATGTAATAAAATAGTACATCTTTTACTGTATCCTTAACTC
GGACATGTACGGAGAAAACAAATTTGTTCGAGTTAAGGAAATTTCGAGTT
AAGGAGTAAGGTTTATAAGACATTGTTAACTGAAGGGACCACGAAACTTG
TTCGAACTAAGGTGACATTCGAGTTAAGAAGTTCGAGTTAAAGAGACTGT
ACTGTATTATGATCTAGATGCTGACTATGTGGATGGAATCACAACACCAC
GTGGTTTCCCAAACACTTCACCAGTCGTTCCAACTGCAAATCAAGTCTCA
CAAGCTGTATTTCAAGTCGAAACTACTAACAATGGTAATGGGAATGGTTT
GGCTGTTTCTTTCATGTCATTTGGACAGTTTTTAGATCATGATTTGACTG
AAGTAGAAATGAACCGATGTCAACTTAAAGTTTTTGGAAGGTAAGATAGC
TTTTACTTTCTTGAGAAAGAAGCAAATATATTAAAAAGTCTTATGTTTTG
ACTTCGTTGATTCCAGGTGAAGCATCATACACGTTTCTTTTATTAGAACA
TGTAAAAATTTTGAAGCCTTCGGATGTTCTTAATTTTTATAGTTTCAAGC
TTAAAGCTAAGGCTACACTGAACAGTTTTTTTTAAAAAACGATGAGTGTA
GCCAGGTCAAAGTCTCTGCAATCTTATTGCGTTGCAAGCGCCCGAAAAAA
ATGAGTGTAGCCATGTCAAATTCCCTGCAATCTTTTATGCAACGAAATAA
AACCGCAAAAAGAATATTGTAAAAAACGTATTATCATACAGCACTAATAT
TACTGTATTACACGGAATATAAAGGACTCCAGTCTAAGTTTTCAGCCAGT
TTCATGCAACCTTTTTTTATTTTACTAGATGCGACGATCTCAAGGAATCA
TTTATTTACCCATGTTTACCCATCCTCTTCAACGACACGTCTGCAGAATG
TACATCATTCAGTCAGTCCGAATCCCTCTGTCCGGAAAATAATAAGCGTC
CGGGAATTCGTCAAATGCCAAATCATCTAAGTGCTTTCATCGACGCTTCG
CAGATCTACGGAAATAGCGATGAGCTAGCTGAATTATTAAGAGATCAAAA
TGGTAAGTACCTTTTAAGAAACAATACAGTGTTTCCCGAAGAAAGTGGAC
CCATTTTTATATAAATCCTTACAATTTAGTCGAGGGCTAATGAGTAACAA
TTAGGCATTCGACAGCATAAAGGATACAGCTAGTGAAATGTCCATCCTTC
CTTTTTTTATGAAGACAATGGCGTCTCTATAGCCGGCCAGATTGGTTCGT
CCCTTGAATTATTCGGAAATTTAGATTTCTAGCGGAAATTGTTTTATTTG
ATTGTTAAGGGGGATGGTTATGTCTAAGTACGGTGTATATCACCAAATGA
AACAATCAAATTTACTATCTTTAGATCGTGCATTGATGGCAATCACCGAA
GATGGGTTAATGCCAATCGCTCAAATAGGTGGATTCGCTGCATGCTCCGT
ATTCAAAGATCTGTTGGGTGAGCGTACAACGAAATGCCGTACTCTGGGCG
GATGTTCTTTAGTTGGTGATATCAGAGGTGATGAAAACATAGCTTTACAC
TCTATGCATACTTTATGGATCCGTGAACATAATAGAATCGCACGTGAACT
CCGTAGAATAAATCCTAGAATGTCCGCGGAAATTATTTACCAAACTGCTC
GTAAGATTGTTGGCGGCATCTGGGCTAATCTTGTTTATGAGGAGTATTTG
CCAGCTTTGGTTCAAGTCTCACCATACAAAAGATATAATCCAAATGTTGA
TCCTTCCATTAGTAATTCGTTCGCCGCCGCTGCATTCCGCTACGGTCATA
GCTTGGTACCCAACTCTTTCCAACAAAATGACGCTGGCTTTAATCCTGTT
ACTGAACCTCTTCCACTACAAAAAGCATTTTTTAACCGCGAGCCTGTCAA
CTTTCGTGGCATCGAACCAACAATGTTTGGTATCACCGGTAACCAATCTA
ACGAAGTTGACAACAACTTTGCTAAAGGAATTGCCCGACGATTATTCGTA
CGTCCTGGCGAAGGCTTCCATTATGATTTATTGGCATTGAATATTCAACG
TGCCCGGGATCATGCTTTACCAACATATGGCGCTTACAGAAAATTCTGTG
GTTTGCCAACCTTGAAAACATGGGCTGACGCTCAATCTACCTTCCTGCCA
AAAGCTGCTGAAGCTTTCCGGAGAATCTACAAAAGCCCCAATGATATCGA
TCTGTTTCCAGCTGGAATCTCTGAAGTTCACCTTCCCAATTCAGAACTAG
GACCAACGTTCAATTGCTTGATCCAGAAACAATTTGAAGATGTCCGAGAC
GGTGATCGATTCTTTTACCGGAACAAAGGTGTTTTCACGCCAAGCCAATT
GCAAGCTATTGAGAAAGTCACTTTTGCAAGTGTATTATGTGCCAATCTCA
AGAATGTTGTATCTATTCAACCCAACGCATTGAGAGTTCCGAATAATGGC
TCTAATCGTCGAATCAGTTGCGCTAGGATTCCAAAACTTAACTTGGGACC
CTGGAGACAGTGA Coding sequence (CDS) from alignment at sc0000059_pilon:1620334..1625246- >XLOC_010480 ID=XLOC_010480|Name=XLOC_010480|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4998bp|location=Sequence derived from alignment at sc0000059_pilon:1620334..1625246- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCTTGATGATTATGAGAATGCATACGAAAATGGAAAGGAAATCAATTC
TGAATCTGATCCTGACGATACACCAATCACCAGTAACGAAGCAATTGAAG
ATTCGAAAAAAAGAAATGGCTTCTTCAACAATGACGGCAATTCAGTTGAA
AATACAATGAATGATTTAAGTTCTTTAGAAGATATTGGTAATGATGATGA
ACAATCAAATGATGAAACAGTTTCTTGATGATTATGAGAATGCATACGAA
AATGGAAAGGAAATCAATTCTGAATCTGATCCTGACGATACACCAATCAC
CAGTAACGAAGCAATTGAAGATTCGAAAAAAAGAAATGGCTTCTTCAACA
ATGACGGCAATTCAGTTGAAAATACAATGAATGATTTAAGTTCTTTAGAA
GATATTGGTAATGATGATGAACAATCAAATGATGAAACAGTTTCAGTGAA
AGGCTTCATTGAGAATCTCAACCTCGGATCAACATCTCGTATACTGAAGA
CAATTCCAAAATGGCCCAAAGAATGGGAAGTCAGTTTCAACATCAGACCA
AACAGACAACGATTCAACAACTGGAGAAGTATCATCCATTTCACTACTGG
AGCTAACCGTAATCCTATTGGATCCAGAATCCCAGCTGTATGGTTCCGCC
CAAACACTCATCAACTGTATATCGTCTCTAACATCAATAATAAAGAAGAC
ATATATACTTCCTCAACAATACCAACAAATAGATTCACCAGAGTTGAAAT
CTCACAACGGAAACAGAGTAACGGCAAATATATCTACCAAATCAAAATCA
ACGGTAACAGAGTTCGTTCACTGGAAAATAGAATCCCAACATCATTCAAC
AATGTTTTGATTTATACTCCAAATAAATGGTCAAGAAGCAGTCTGGCTCA
ATTGAGGAAATTCAAATATCAAGGATTTTCTGATGTTAATCGTTTACCAA
GCTCCAATTTATTACCAGCCAGTAATATAATTCAAATTTCAGTGAAAGGC
TTCATTGAGAATCTCAACCTCGGATCAACATCTCGTATACTGAAGACAAT
TCCAAAATGGCCCAAAGAATGGGAAGTCAGTTTCAACATCAGACCAAACA
GACAACGATTCAACAACTGGAGAAGTATCATCCATTTCACTACTGGAGCT
AACCGTAATCCTATTGGATCCAGAATCCCAGCTGTATGGTTCCGCCCAAA
CACTCATCAACTGTATATCGTCTCTAACATCAATAATAAAGAAGACATAT
ATACTTCCTCAACAATACCAACAAATAGATTCACCAGAGTTGAAATCTCA
CAACGGAAACAGAGTAACGGCAAATATATCTACCAAATCAAAATCAACGG
TAACAGAGTTCGTTCACTGGAAAATAGAATCCCAACATCATTCAACAATG
TTTTGATTTATACTCCAAATAAATGGTCAAGAAGCAGTCTGGCTCAATTG
AGGAAATTCAAATATCAAGGATTTTCTGATGTTAATCGTTTACCAAGCTC
CAATTTATTACCAGCCAGTAATATAATTCAAAAAAACTCATTCGCTAAAT
GCCAAGAGCCAAGAACAAGAATATATTGCAGCAAAGCTAGCAATGAATTC
CGAACCATTGATGGAACGTGTAATAATGAAAGAAATCCGCAATGGGGAGC
AAGTGAAACTGCTCTCGCTAGAATTGTTGAAAACTCATTCGCTAAATGCC
AAGAGCCAAGAACAAGAATATATTGCAGCAAAGCTAGCAATGAATTCCGA
ACCATTGATGGAACGTGTAATAATGAAAGAAATCCGCAATGGGGAGCAAG
TGAAACTGCTCTCGCTAGAATTGTTGATGCTGACTATGTGGATGGAATCA
CAACACCACGTGGTTTCCCAAACACTTCACCAGTCGTTCCAACTGCAAAT
CAAGTCTCACAAGCTGTATTTCAAGTCGAAACTACTAACAATGGTAATGG
GAATGGTTTGGCTGTTTCTTTCATGTCATTTGGACAGTTTTTAGATCATG
ATTTGACTGAAGTAGAAATGAACCGATGTCAACTTAAAGTTTTTGGAAGA
TGCTGACTATGTGGATGGAATCACAACACCACGTGGTTTCCCAAACACTT
CACCAGTCGTTCCAACTGCAAATCAAGTCTCACAAGCTGTATTTCAAGTC
GAAACTACTAACAATGGTAATGGGAATGGTTTGGCTGTTTCTTTCATGTC
ATTTGGACAGTTTTTAGATCATGATTTGACTGAAGTAGAAATGAACCGAT
GTCAACTTAAAGTTTTTGGAAGATGCGACGATCTCAAGGAATCATTTATT
TACCCATGTTTACCCATCCTCTTCAACGACACGTCTGCAGAATGTACATC
ATTCAGTCAGTCCGAATCCCTCTGTCCGGAAAATAATAAGCGTCCGGGAA
TTCGTCAAATGCCAAATCATCTAAGTGCTTTCATCGACGCTTCGCAGATC
TACGGAAATAGCGATGAGCTAGCTGAATTATTAAGAGATCAAAATGATGC
GACGATCTCAAGGAATCATTTATTTACCCATGTTTACCCATCCTCTTCAA
CGACACGTCTGCAGAATGTACATCATTCAGTCAGTCCGAATCCCTCTGTC
CGGAAAATAATAAGCGTCCGGGAATTCGTCAAATGCCAAATCATCTAAGT
GCTTTCATCGACGCTTCGCAGATCTACGGAAATAGCGATGAGCTAGCTGA
ATTATTAAGAGATCAAAATGATCGTGCATTGATGGCAATCACCGAAGATG
GGTTAATGCCAATCGCTCAAATAGGTGGATTCGCTGCATGCTCCGTATTC
AAAGATCTGTTGGGTGAGCGTACAACGAAATGCCGTACTCTGGGCGGATG
TTCTTTAGTTGGTGATATCAGAGGTGATGAAAACATAGCTTTACACTCTA
TGCATACTTTATGGATCCGTGAACATAATAGAATCGCACGTGAACTCCGT
AGAATAAATCCTAGAATGTCCGCGGAAATTATTTACCAAACTGCTCGTAA
GATTGTTGGCGGCATCTGGGCTAATCTTGTTTATGAGGAGTATTTGCCAG
CTTTGGTTCAAGTCTCACCATACAAAAGATATAATCCAAATGTTGATCCT
TCCATTAGTAATTCGTTCGCCGCCGCTGCATTCCGCTACGGTCATAGCTT
GGTACCCAACTCTTTCCAACAAAATGACGCTGGCTTTAATCCTGTTACTG
AACCTCTTCCACTACAAAAAGCATTTTTTAACCGCGAGCCTGTCAACTTT
CGTGGCATCGAACCAACAATGTTTGGTATCACCGGTAACCAATCTAACGA
AGTTGACAACAACTTTGCTAAAGGAATTGCCCGACGATTATTCGTACGTC
CTGGCGAAGGCTTCCATTATGATTTATTGGCATTGAATATTCAACGTGCC
CGGGATCATGCTTTACCAACATATGGCGCTTACAGAAAATTCTGTGGTTT
GCCAACCTTGAAAACATGGGCTGACGCTCAATCTACCTTCCTGCCAAAAG
CTGCTGAAGCTTTCCGGAGAATCTACAAAAGCCCCAATGATATCGATCTG
TTTCCAGCTGGAATCTCTGAAGTTCACCTTCCCAATTCAGAACTAGGACC
AACGTTCAATTGCTTGATCCAGAAACAATTTGAAGATGTCCGAGACGGTG
ATCGATTCTTTTACCGGAACAAAGGTGTTTTCACGCCAAGCCAATTGCAA
GCTATTGAGAAAGTCACTTTTGCAAGTGTATTATGTGCCAATCTCAAGAA
TGTTGTATCTATTCAACCCAACGCATTGAGAGTTCCGAATAATGGCTCTA
ATCGTCGAATCAGTTGCGCTAGGATTCCAAAACTTAACTTGGGACCCTGG
AGACAGTGAATCGTGCATTGATGGCAATCACCGAAGATGGGTTAATGCCA
ATCGCTCAAATAGGTGGATTCGCTGCATGCTCCGTATTCAAAGATCTGTT
GGGTGAGCGTACAACGAAATGCCGTACTCTGGGCGGATGTTCTTTAGTTG
GTGATATCAGAGGTGATGAAAACATAGCTTTACACTCTATGCATACTTTA
TGGATCCGTGAACATAATAGAATCGCACGTGAACTCCGTAGAATAAATCC
TAGAATGTCCGCGGAAATTATTTACCAAACTGCTCGTAAGATTGTTGGCG
GCATCTGGGCTAATCTTGTTTATGAGGAGTATTTGCCAGCTTTGGTTCAA
GTCTCACCATACAAAAGATATAATCCAAATGTTGATCCTTCCATTAGTAA
TTCGTTCGCCGCCGCTGCATTCCGCTACGGTCATAGCTTGGTACCCAACT
CTTTCCAACAAAATGACGCTGGCTTTAATCCTGTTACTGAACCTCTTCCA
CTACAAAAAGCATTTTTTAACCGCGAGCCTGTCAACTTTCGTGGCATCGA
ACCAACAATGTTTGGTATCACCGGTAACCAATCTAACGAAGTTGACAACA
ACTTTGCTAAAGGAATTGCCCGACGATTATTCGTACGTCCTGGCGAAGGC
TTCCATTATGATTTATTGGCATTGAATATTCAACGTGCCCGGGATCATGC
TTTACCAACATATGGCGCTTACAGAAAATTCTGTGGTTTGCCAACCTTGA
AAACATGGGCTGACGCTCAATCTACCTTCCTGCCAAAAGCTGCTGAAGCT
TTCCGGAGAATCTACAAAAGCCCCAATGATATCGATCTGTTTCCAGCTGG
AATCTCTGAAGTTCACCTTCCCAATTCAGAACTAGGACCAACGTTCAATT
GCTTGATCCAGAAACAATTTGAAGATGTCCGAGACGGTGATCGATTCTTT
TACCGGAACAAAGGTGTTTTCACGCCAAGCCAATTGCAAGCTATTGAGAA
AGTCACTTTTGCAAGTGTATTATGTGCCAATCTCAAGAATGTTGTATCTA
TTCAACCCAACGCATTGAGAGTTCCGAATAATGGCTCTAATCGTCGAATC
AGTTGCGCTAGGATTCCAAAACTTAACTTGGGACCCTGGAGACAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:1620334..1625246 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1363-2499:1138 |
| Aaloc | 1138-1359:1685 |
| Aaloc | 916-1134:2345 |
| Aaloc | 769-912:3204 |
| Aaloc | 223-765:4172 |
| Aaloc | 1-219:4914 |
|
