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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000142_pilon:698180..701831+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010442 ID=XLOC_010442|Name=XLOC_010442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3652bp|location=Sequence derived from alignment at sc0000142_pilon:698180..701831+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTgcagaagaaaatgaaaaacttttaaatcaaaGTCTTCTTGTGAATAA
AGAGAATAATAATATACAGCTTATCATTCCTCAGCCAGAGAAGAAATTTA
AAGGAGTTGAGAAAGTTGCAGCTCAATCAATTTTAAATGAGGTTAACGGT
CAATTTCAAACCATCTTTAATCAAAGTTTTACCGATGTATTGTGTAAGTT
AAAGGGTACCGATGTTGAGAAGAAAAAGTCACCAGCTGaaaaaaaGAAGT
ACATTCGAAAGATCCAGGGCAAGGTAAGTACCAAAATTAGCTTTGTTTCA
GAGGGGTAATTTTTAGATAATTACCTCATAAATCGTTTTACATCAATATT
ATTGTCGCTCTGTCTTAAGTTGACCTTACTTTTAGGTTCTAAATAAATGT
CTCCCCCttgttaatttttggaaaattttccaaccccccctcccggacct
tattaggacccctgtttattaatttttaagaatattttctgctgtcaaag
agaaggccccttattttgctcaaaatagcctgattttagcctttatTTAC
CTTACTTTTGGGTTTTCAGAGGTACACTTttcaaccccccggcaattaag
tccccccatttattaaattttgaaagttttatattcaaaccccccccccc
ccgtttatttggaacttaaGAGTAGGTAATATTTTTTAAGTGCAGCTCTC
ACTATATTCTATTTACTAAAAGTCTACTCTGaattaaattttgattatac
ttttgaaaatcaaacttttgactAAAGCATAGGTATTACTTTGGTGtgtt
atattttgaatttttactccattttttatctttttttccaGGCTAAAGCT
TCTCTAGAAAAGAATTACCAAGAAAAGCAAGCTGACATGATATATGGGAC
CAGAACATCTTTAAGCAAATACGATAGCCAACGACttgcattgaattttg
aatcgCCAGCTTCGGCAGTTTTGTGTAACAACAAAAGTAAGTGTTTTAAC
TTTCACTACCTAAAGTGCTGTGTGGAGGATATTGATAGtttattcttttc
tttaatgttttgtcatcttttattttcagatcaaaacattcaatagcaca
taaaattaaaaagtaattacaATTGTTTCATCAATTATTGAATGATCTTT
ATCCATGTTTTGATCTTGTCACATTGTTGGATTATCATTGGCTTACTGAC
ACAGTAATCAACACGTAATCAACATGGTTGTGCTCGATTATCCGCTACCA
GGATGTGGTTTCCAGACACCTGATCATGACGTCATTGGTGCAGCCGCTAT
CCTCAACCTTCAGTcacacacacacaTTATGAATCCGGTACCACAAGCTG
CTCCACGACCCAGTGCCCCAAAGCTGATCCGACCAAAGATTCAGGACAAC
TCAACGTCTGAGGATTGGAATACCTTCATTAGACGCTGGGACACCTTCCG
CATTGGCTCTGGAATCACCGACCAAGCTGCTTCCACTcaagaaaaataca
ttttttactagtaaattatatttttttaaattgtagtCATGTTACCTATA
TTCAGGAAgccaaagttgaaaaatatttagaacCATGTATTCTgctattt
ttgatttataactCTGATTCACTGTTTATTTGTAGGGAAAggtaagataa
aaaaaaaaacagtgcaatttcaaaattgttgctttttttcttcatttttt
aagggAAACAAACTGAGATAGAGACTGGTAAAAAGCGACGTAAGCACAAA
AAACCAGCTGATTTTGACTTTGACGGTGATGCTATGGTAAATGAAGTTGA
GAGTATGCCTGACAATGCAAAGGTAAAGGAGGCTTTTGtaacttttatct
tttattCACTATTACCTCAGTTGAAGAGAAACAGTGATAAGGATTGTCAA
ATAAAATGCTCCAGTCTAGTATGTTACCGGCCACCGAGTTCACTACCTGT
GGGTGAACCAGCTTTGGAGCGGAAAGGGTAGCGAGGTTATAATTTTAAAT
ACCCGGCTATTCTACTAAAGGTAACAATTTATGTAATCATCATAATGTAA
ATAATTACATCTGTGGTGGTTACAAAACGACTCATATCTAAGTTGGATTT
TGATACATAAGAGAttttttccattaaattcttCTTTAATCAAATCCATA
AATTGAAAACCAAATAGCTTAAACTTTTGTTAGACCAAAAATACACCCAC
atctgtattttcaattttttatttttttgacctatttttAACTTTCAGAT
AAATTTTACTGAGATTGCCGACAAGTACAAGATTGTTGATGGTAATAATG
GAAACAGTATTGTGATAGAGTATCTGAAAAGTAGAAATGTAAACTTATCC
AGACTACACAATCCTTTTGTCAACTTAGACAAATCCAGAAGAGCTTCGTT
GAAGTTTTCAGGTATCTAGTCAGCTAATAAACAGATTTTATTGACCCCAG
GTATTTTGAGGAATAAGGATTAATTAGAATGAAACTTTGGGGAGAATCAC
ACATTTTATTTCAGGACATAAGAGCAGAAGTCTACAACTTTACTAAAAAT
CCATACTTTTATTTCGCTGAGTTTAGTTGAAAATAATGTGAATTTAGGCA
CACTTATCACTTTAGTCTTGCTTGTTTAGAAGTAAATTATGAGTAATAAA
ATATCATTACTTAGTATCTTtagctttgaagtttttttaaaattacTAAC
TGGTTTTTATTCTAATATGACTTTCTTATGAGTCTCTAGGTGAGCttttt
ttAGTCCAACATTACTCTAGTTCATTTAATTTTACTATCATTTTAAACCT
AATTTTACTAAAATGGTTATCCTTTGGTTATCATTAAAGGCTGCACCATC
CTAGGGTAGGTCACCTTGAGTGCTTTCCAGCGGGCTATAAAAGGAATAGA
TTTAGTTctgaaattaaatttcaaattattaaaGACAGCATGGGCGCAGC
ACAcatttaagggggggggggtcaagcagttactCCAGAACACTAtttgt
actaactgattttttgaaaaatctgtacCCCACCACCACCCTCTGTCACT
TAGTACActgtgtactaactgattttgaGGGCAAATTTCAATACACCACC
CCCAAAATAACCCAAAATCGCATTTTTGGCCCATgcacttttcaaaattt
gcctttGTTGAAAATATGTTAGAAATTATACATGTTTtagaaaaagatgt
tttttttattttcaaattttcaaattatttttttaagattgaaaaatttc
ttttgtattttcctccccaaaagcccaattttttcagaaaaaaatcgatT
CTTGGCAGTTAGTACACAAATTTGCTGTTAATCGCCAAGCATACCACCTG
CTTTTGCACTTAGTACACTGGGTCTACTAACTGCATTTTGCTAATTTTGA
AAATGGACCACCACCATACTAAATGTCATGGGTATcatgtactaactgct
tgaccccctgCACATTTTAGTATTTCTTATCAGATCAAACTGGTCCTTAT
TGAAATTGCAGgaacaaatttatattttagaaCTGTAAACCCCTATTCTA
TTCTAGGTGGTGCTTCATACCCCAAGCTACCTACAGGTAAACAGTTACGG
AAACAGATGTCAGATCGAGTTGAGAAAGGACAATATTTGCTTGGGGACCT
AG Coding sequence (CDS) from alignment at sc0000142_pilon:698180..701831+ >XLOC_010442 ID=XLOC_010442|Name=XLOC_010442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1266bp|location=Sequence derived from alignment at sc0000142_pilon:698180..701831+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTgcagaagaaaatgaaaaacttttaaatcaaaGTCTTCTTGTGAATAA
AGAGAATAATAATATACAGCTTATCATTCCTCAGCCAGAGAAGAAATTTA
AAGGAGTTGAGAAAGTTGCAGCTCAATCAATTTTAAATGAGGTTAACGGT
CAATTTCAAACCATCTTTAATCAAAGTTTTACCGATGTATTGTGTAAGTT
AAAGGGTACCGATGTTGAGAAGAAAAAGTCACCAGCTGaaaaaaaGAAGT
ACATTCGAAAGATCCAGGGCAAGACTgcagaagaaaatgaaaaactttta
aatcaaaGTCTTCTTGTGAATAAAGAGAATAATAATATACAGCTTATCAT
TCCTCAGCCAGAGAAGAAATTTAAAGGAGTTGAGAAAGTTGCAGCTCAAT
CAATTTTAAATGAGGTTAACGGTCAATTTCAAACCATCTTTAATCAAAGT
TTTACCGATGTATTGTGTAAGTTAAAGGGTACCGATGTTGAGAAGAAAAA
GTCACCAGCTGaaaaaaaGAAGTACATTCGAAAGATCCAGGGCAAGGCTA
AAGCTTCTCTAGAAAAGAATTACCAAGAAAAGCAAGCTGACATGATATAT
GGGACCAGAACATCTTTAAGCAAATACGATAGCCAACGACttgcattgaa
ttttgaatcgCCAGCTTCGGCAGTTTTGTGTAACAACAAAAGCTAAAGCT
TCTCTAGAAAAGAATTACCAAGAAAAGCAAGCTGACATGATATATGGGAC
CAGAACATCTTTAAGCAAATACGATAGCCAACGACttgcattgaattttg
aatcgCCAGCTTCGGCAGTTTTGTGTAACAACAAAAggAAACAAACTGAG
ATAGAGACTGGTAAAAAGCGACGTAAGCACAAAAAACCAGCTGATTTTGA
CTTTGACGGTGATGCTATGGTAAATGAAGTTGAGAGTATGCCTGACAATG
CAAAGggAAACAAACTGAGATAGAGACTGGTAAAAAGCGACGTAAGCACA
AAAAACCAGCTGATTTTGACTTTGACGGTGATGCTATGGTAAATGAAGTT
GAGAGTATGCCTGACAATGCAAAGGTGGTGCTTCATACCCCAAGCTACCT
ACAGGTAAACAGTTACGGAAACAGATGTCAGATCGAGTTGAGAAAGGACA
ATATTTGCTTGGGGACCTAGGTGGTGCTTCATACCCCAAGCTACCTACAG
GTAAACAGTTACGGAAACAGATGTCAGATCGAGTTGAGAAAGGACAATAT
TTGCTTGGGGACCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000142_pilon | genome | sc0000142_pilon:698180..701831 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-633:3557 |
| Aaloc | 421-537:1706 |
| Aaloc | 274-417:842 |
| Aaloc | 1-273:1 |
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