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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000239_pilon:390900..394156+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010379 ID=XLOC_010379|Name=XLOC_010379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3257bp|location=Sequence derived from alignment at sc0000239_pilon:390900..394156+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACATCGAGCAAAATGTTTTCGTCACTTACTCCGCCACAGCTTCT
ATTTTGCGAGGAAGATGATCGTTATTTGGATTATGATGTTGATGTTTTGA
AGAATTTCCGTCTGTTTTCGTCCACATTTTCTGTCGATGAGTTGATGAAG
GAGATCCCATGGAGCACAGAACATCCCAGCACTTCTGCACAACCTGTTTA
CAAGAAGTCAGTACGCCAAGATTGCATGTGGTCAAGAAAAGTGGATACCA
AAGAATCTTTGGAAATCAATATCAACAATAACTGTTTACCTTCATCACAA
ACTTACAATTTGGTTCCTCCCGACCTTATCTTATCCGTACGCAAAAAAGG
ACTTTTCCAACCATGCACGTACGATTTACCGAGCTCGTCGGAAAGTTTTC
ACTCGTCAGATGAAGAGATACGAATGCAAGGAGATGTAAACATATCACCA
AACTCAACAAATCTCCAAAATGGTAAGgatattttctttgttaatatttt
tccgagggtttgaattataaaaatattaatccCTTTTCTGTTCGATGGgg
aaactacatgttttttttttataagcaagtgtctgcccctacatcaggct
cgcattatgcttagcattctattgttctcaaacaatagagccattgttta
ggtaccaaaaactgagcctgcatatgcttataaacgttatgcttataaaa
gaaaaaacatgtaatggtaatagcttttttaaaagaacatctataatttt
tgaagccttcggatgttttaacttttttgatttcaagcctaaaaatgttc
ttaacatgtttttattttcacctttttgtgagcatttttgcctattttcc
tATGAAACCGGTTGTTTTAGAGTATGCAAAGCCTTAAagtattcttaact
tgttcttgatatttttttggtcAACGAAGCCTTATGATCTTATAAAGTTT
GCTcgtataaaaacaaaaacgcgCAACGTCTAAAATCCCTCAATTACACC
Ctaaagcagccaacgagcccatttccccgaaatatctgtttcccttttcc
aggagagggctttttttgaaaaatggggaaacagatccgattttctagga
gagaccttttccttaaaactatctgtttccccgctccagctgatgacgtc
atcagagagaaacagatcaataatttctaggagatgacataataaattgg
gaaacagatatctgtttccaaaaaagatgatattgcattggaaacagatt
gaactttatgggggaaacagatatcaataacaaaaagaaagggaaacaga
tgaaaatttccaggagaggggaacagatatattttttgggaaaacagatc
aaaattttaattctgaaaattgtggaaacagatcaaattttctaggaaag
atactttgagattaaaaatttaggttttgcggagaaacagatcttcattt
ctaggaataagatttttgaaatattcggccaacagatcaaattttccagg
aaggctatgtctgggaaacagatatttaaaaaaaggtcctcgttggatgc
tttcgTATGAATAAGAACAGTTTGAGGCTTAAagtcaaagtgccaaaaaa
ataagagcaGCCGAGTCTcagaaaaaattttactggttcttatgaaaaaa
gtgtaaaGCTTTGGACTTTCTTTTGGCCAcatttttatttagcttcaaga
TTTTATCTGGGAACCTCCCCTAAAAGCCTTTTATTATTAGGGTTGAAATA
AAACATGGAcgctgggcgaaataagagatttccaatcgtggaaatatctt
gaaaatatgatatttccatatacttttgtaaatatgggaaatatgacttt
tctacaTTTGTGGAAATaccatatttcatgatatttccaaatctgaaata
tatccagaaatatcatattttcaaaatgtttccaacttttggaaatatga
tatttccaaaaatatgaaatatcttgaaaatatgatgtgtcaatgaattt
cagatttggaaatatcattaaatatgaaatatcatattttaaaTAATCTC
CAGGaatggaaatctcttatttcgcccagttgGATTGAAAGCGGGATGTT
ACAAGAGATTTTACGCGAACCCTCTTACTGAAACGAATTTGTATAATTTC
TTACTTTGTAGCAGCTGCATATCCTTCCAAGTACAGAAATTACTCACagt
gaaacccaaaaagttaaaagcaTTCAATAAGTCTTACTCTAAAAGGTGCC
TAATTATCTGGTACTAGATGCGGAAATTTGTTACACGACACGCTTTTCAC
TGAAGGTCGGGCAAATTTTAAccttagagctttagcgtgagTGACCGTCA
ACAATATGCCATCGTATATCAGATAAGTTGTCAAATGAACGCCCGTCCCG
TCCCCGCATGctaattttccgatttttttccaacctctAACCTTTGTAAA
GGTCCCACAAACCTAGCTTTAATCAATAAATTATGATAATTACCTTATTT
GTCCACCCTCTGCATCCTCCTGTCTATTAGGCATATGAGAGtaataatgt
tttgaaattcttacgttataaaaaaatgtgtgtttgtattttttcaagaa
tcttttatctttttagaTGAAGAAGTAAACGTGGTGGACCTCTCACCTCA
CTCTTGTGTCGGTCTGCGTGCAGGCCAAAGTTTTTACTCTCATGACAAAT
CTCCGTTGCACACACCTTACCGTACGGAAAACGAAGTCAACGAGCACTCT
CTACCTTGCACCACTCCTCGTATGAAAGAATATCTTTTTGACGAACCTAC
ACGTGTCAATCAGAAATCTTGTAACCAATCATCTTGTAACCTTTCACCTG
ATCGAATGCCTTACCAAATCAAGGAGATAGCTATGAAAAACTGTACGGAT
AAAGTGAGCAAAATTAGATATAcagcaaaaaagaagaaaaaagaagaaac
accGATTGATGTAAAACAGAGCCCGCAAAAGCGGAAGTCCAATCCCTCAA
TGCAACATAATATGATGGAGAGAGTTCGACGGATAAATCTACGTGAAAAG
TATCAAAATCTGCGCAAAGAGCTCCCCTCTATTTCAGGAAACGTAAAAGT
ACCGAAAGTAAAAATTCTTAAGGAAGCTATAATGGAACTAAAACACCTTA
CATATGAAGAAAGTAACCTGAATCATATTAAGCGTTCTTTGATTGACCGT
TACGAAGATTTGCAGCAGAAGTACTCTGATCTACATCAGCATTCTGCAGC
ATCTTAA Coding sequence (CDS) from alignment at sc0000239_pilon:390900..394156+ >XLOC_010379 ID=XLOC_010379|Name=XLOC_010379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000239_pilon:390900..394156+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACATCGAGCAAAATGTTTTCGTCACTTACTCCGCCACAGCTTCT
ATTTTGCGAGGAAGATGATCGTTATTTGGATTATGATGTTGATGTTTTGA
AGAATTTCCGTCTGTTTTCGTCCACATTTTCTGTCGATGAGTTGATGAAG
GAGATCCCATGGAGCACAGAACATCCCAGCACTTCTGCACAACCTGTTTA
CAAGAAGTCAGTACGCCAAGATTGCATGTGGTCAAGAAAAGTGGATACCA
AAGAATCTTTGGAAATCAATATCAACAATAACTGTTTACCTTCATCACAA
ACTTACAATTTGGTTCCTCCCGACCTTATCTTATCCGTACGCAAAAAAGG
ACTTTTCCAACCATGCACGTACGATTTACCGAGCTCGTCGGAAAGTTTTC
ACTCGTCAGATGAAGAGATACGAATGCAAGGAGATGTAAACATATCACCA
AACTCAACAAATCTCCAAAATGATGGAAACATCGAGCAAAATGTTTTCGT
CACTTACTCCGCCACAGCTTCTATTTTGCGAGGAAGATGATCGTTATTTG
GATTATGATGTTGATGTTTTGAAGAATTTCCGTCTGTTTTCGTCCACATT
TTCTGTCGATGAGTTGATGAAGGAGATCCCATGGAGCACAGAACATCCCA
GCACTTCTGCACAACCTGTTTACAAGAAGTCAGTACGCCAAGATTGCATG
TGGTCAAGAAAAGTGGATACCAAAGAATCTTTGGAAATCAATATCAACAA
TAACTGTTTACCTTCATCACAAACTTACAATTTGGTTCCTCCCGACCTTA
TCTTATCCGTACGCAAAAAAGGACTTTTCCAACCATGCACGTACGATTTA
CCGAGCTCGTCGGAAAGTTTTCACTCGTCAGATGAAGAGATACGAATGCA
AGGAGATGTAAACATATCACCAAACTCAACAAATCTCCAAAATGaTGAAG
AAGTAAACGTGGTGGACCTCTCACCTCACTCTTGTGTCGGTCTGCGTGCA
GGCCAAAGTTTTTACTCTCATGACAAATCTCCGTTGCACACACCTTACCG
TACGGAAAACGAAGTCAACGAGCACTCTCTACCTTGCACCACTCCTCGTA
TGAAAGAATATCTTTTTGACGAACCTACACGTGTCAATCAGAAATCTTGT
AACCAATCATCTTGTAACCTTTCACCTGATCGAATGCCTTACCAAATCAA
GGAGATAGCTATGAAAAACTGTACGGATAAAGTGAGCAAAATTAGATATA
cagcaaaaaagaagaaaaaagaagaaacaccGATTGATGTAAAACAGAGC
CCGCAAAAGCGGAAGTCCAATCCCTCAATGCAACATAATATGATGGAGAG
AGTTCGACGGATAAATCTACGTGAAAAGTATCAAAATCTGCGCAAAGAGC
TCCCCTCTATTTCAGGAAACGTAAAAGTACCGAAAGTAAAAATTCTTAAG
GAAGCTATAATGGAACTAAAACACCTTACATATGAAGAAAGTAACCTGAA
TCATATTAAGCGTTCTTTGATTGACCGTTACGAAGATTTGCAGCAGAAGT
ACTCTGATCTACATCAGCATTCTGCAGCATCTTAAaTGAAGAAGTAAACG
TGGTGGACCTCTCACCTCACTCTTGTGTCGGTCTGCGTGCAGGCCAAAGT
TTTTACTCTCATGACAAATCTCCGTTGCACACACCTTACCGTACGGAAAA
CGAAGTCAACGAGCACTCTCTACCTTGCACCACTCCTCGTATGAAAGAAT
ATCTTTTTGACGAACCTACACGTGTCAATCAGAAATCTTGTAACCAATCA
TCTTGTAACCTTTCACCTGATCGAATGCCTTACCAAATCAAGGAGATAGC
TATGAAAAACTGTACGGATAAAGTGAGCAAAATTAGATATAcagcaaaaa
agaagaaaaaagaagaaacaccGATTGATGTAAAACAGAGCCCGCAAAAG
CGGAAGTCCAATCCCTCAATGCAACATAATATGATGGAGAGAGTTCGACG
GATAAATCTACGTGAAAAGTATCAAAATCTGCGCAAAGAGCTCCCCTCTA
TTTCAGGAAACGTAAAAGTACCGAAAGTAAAAATTCTTAAGGAAGCTATA
ATGGAACTAAAACACCTTACATATGAAGAAAGTAACCTGAATCATATTAA
GCGTTCTTTGATTGACCGTTACGAAGATTTGCAGCAGAAGTACTCTGATC
TACATCAGCATTCTGCAGCATCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000239_pilon | genome | sc0000239_pilon:390900..394156 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 475-1113:2619 |
| Aaloc | 1-471:1 |
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