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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:494127..497257+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_010043 ID=XLOC_010043|Name=XLOC_010043|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3131bp|location=Sequence derived from alignment at sc0000238_pilon:494127..497257+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGAAAACTTacaagaaagtgaagaaaatttaGTTACCAGTGTAAC
GAACGCAGATTTAGAAAGTTTCATAAACCATGATCCCGAAGATATTGTTT
ATAAGGAGTTCGAAAACGACCCAAATGTAGCGACAGATCCTCATTTTAAA
TGGAAATGTatgaaaacagtttttttattgAACTTTTTTGGTGCATTTGG
TGTTGGTCTGCTATCAATATTATGCGTCTATTTCGACCTGAATTTCAGTA
ACCTTTGTGACTCTACGAAATGGATAAATTTAccacataacatcaaaatt
gCACACTTGTACAGTAAAGCTGCTTCTGATCAAATCTATCTATTTTGGTA
TGTCATAAACCTTTTGCTCGTTTTTGAAGTGTCGAAAATTCAAAGACAAG
TCTTGATACTGGCAAACTTATTGGCTGGTTGTGTATGCACTATATGGAGA
CTATCAACTGTTGCCACAGATTTGTATGGGAAATCGTCACTTCTAGGAGC
GCCGCAGTTCTTGATTTTCATCGTAATGAGCATATATACAACAAGCGTTG
TCTTAAAAGGTAATGTTTGCATTCTAAAGCCTTCATACTTTAacttagtc
tagcaagctagacgactaattcagacatattagaaataaaccaaaaaagt
aaattttagtcgtctagaaacctttgtgcactaactccaaacacaaaaaa
gtgtcaatatcgcaattaaaattttttcccgctcaaaaaaaattcttgaa
attaaaatgtgtgtggatttgtgtgttaaaagtttttcatttgagttgat
tttattttgagagcttgttgttgcttgataaattgttttctcgctacgca
agtttctgcgtagctagccccggtatctataaggctggaacaccggattc
ttccagtcgtttatacaaactaaatcccgtatcattttttgtgtttatta
ttagtattacatgcattataaacgactccagtctaactttaactggatta
aatttcgcgagattaaatttcgcgagctaaaaaaatcgcgaaattttctg
gatttaatttcgcgagtcagagttttgaaatatttctgactgaaaatagc
cattttttgccataaatggagacttggaactagtttctccgccaaaaata
caattttaaaagttttgtggtggatttaatttcgcgaatcaggaatctca
cgcgtgttcgcgagttttaattttgcgaaaatggaaaaaattcgcgaaat
cgcgaaatttaatctcgcgaaaattaatccgattaaagtatctACCCATA
TTCGCCACTTTCACTAAAAGACTAAAAAGTACCGATTTGTCAAAAACACA
GTAACAGCATTGGTGGAAATCGGTCAGTTCTTGTCAGTTTACCTTGATGT
AGAAGttttacctttttttactatttttttcagAAGTACAGGGATATCGC
CCGGGAGGGTACTTGGGCAAAGATGCTGGGTATGTATGAGTCATAAGGGT
CGaaggaaacaaaaaacatttaaaagcaaattgagtctctgtaagggttc
caaaattgcaaaaataaaaagaatcggctccttcaaagggtcataaattc
ttgaaatttcgcactaaaatgaaaatttttgactgaaatttggggGAAAT
AAGTCTCTCTAAAATggaggaaattttcaaaattcagtctcCTCTAGGGG
TCGGTTTTAAAACTTTTGCTCGAATTTACCCGTCATCTTGCAAACTTGAc
ccccccGGATGTCGGTTAGCACCTATATCTCAAACGAAACCGAGAACATT
TAGAGTTAAGAAATCACGCTAACAGTCTGGGGGGTGCAGGCACTTAGGAA
AAACAGGTGACGGGTATGTGTTATCCATAAGGGCACCCTTTTTCAtacct
caaaagtctctcaaagaaGTGCAAAATCATAGGTTAGTCTCTCAAAGGGC
TCTAAAATACTAAATCGAAAAATTCCCTTTCAAAGTGTTACAATCTCAAG
CATTCTGAccaaaagttattgaaaattaatcaaaatttgtgtaaaatctc
tcaaagggtctaaaagatatcaaacattTCTCTCTTGCAAAGGttcaatt
ttagatttttggctCGTACACACCTGACGCTTTGTAAACCAAGTATAGCC
TTTCCCTGGGTAACAGTGCAATTCTGGTTACCAAATAAATAATTGCTTTT
ATTCGTAAAAATTGTTGTTATAGAAAGAATAACAACTGGTTTTTGGAGAC
GTCTCATCGTGACGCTGAACGTCAACAACCAAATTATCATAGCTTTCGTT
TTTTATCTGGTCCATTTCTACGTCATCTTGCCGACATTCATCAAAGCGTC
AATCTACATTCGCCTGGCGATGGCATTCTTTATACCGATTGTCGGATACG
GTGCACGAATTTTATGTCGTGTTTGTCTTCAACACATAAAGCATATACTA
CACCCAGGACGGTTGTATATTCTTTCAGCAGGGCTGCATGCATTAACAGT
GACTTTATATCGGATCTTACAAGCCAGTGTCCAATCAACGTGGGCTTTTA
TTGCTCTCGGATTGGCTCATTCTGTGGTTGGTTTCATCGATAAAATATCA
GTTCTTTACCAACGATCAGCTTTATCATTTGTATGCAGAAAGTTTTGTTT
TCGAGTATATAGAGTAAAACGAAACCCAAGAGAAATGCGTGAGTCAgcag
atattttgattttgaatttggTATATGAGTTATGGGGAGTTATGATCACA
TGTTTCACATATACGTTATATGCTGTTCAACATTCGATACCTTTGAatcc
aaaaatcgaaaaggaATACACTCAGGGACCAGTTATTCGAGATTTGATGT
ATCGAATCATTTTTACAATTTGTGTGGAAACAATTTCGTCTACCCTGGCT
GTATTTTGGGTCATCAAGAAATCGAATTTCGCCATTATTAAGTTGTGGAC
TGTTAAATGGAAATTATATTGTTTCGTTCTTGCAATGAACGCAATTTTCC
CGTTGATATTAGCTTCCAAAACATTAGTAAACATAACAGAGGAAAGCTTC
ACTTTATTTTTAATAGACTCTGGAAGACAAGATTTAGCCTCGAAGTTGAA
AATGTGTAACTATACTTCAAGACCATATTAA Coding sequence (CDS) from alignment at sc0000238_pilon:494127..497257+ >XLOC_010043 ID=XLOC_010043|Name=XLOC_010043|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2934bp|location=Sequence derived from alignment at sc0000238_pilon:494127..497257+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGAAAACTTacaagaaagtgaagaaaatttaGTTACCAGTGTAAC
GAACGCAGATTTAGAAAGTTTCATAAACCATGATCCCGAAGATATTGTTT
ATAAGGAGTTCGAAAACGACCCAAATGTAGCGACAGATCCTCATTTTAAA
TGGAAATGTatgaaaacagtttttttattgAACTTTTTTGGTGCATTTGG
TGTTGGTCTGCTATCAATATTATGCGTCTATTTCGACCTGAATTTCAGTA
ACCTTTGTGACTCTACGAAATGGATAAATTTAccacataacatcaaaatt
gCACACTTGTACAGTAAAGCTGCTTCTGATCAAATCTATCTATTTTGGTA
TGTCATAAACCTTTTGCTCGTTTTTGAAGTGTCGAAAATTCAAAGACAAG
TCTTGATACTGGCAAACTTATTGGCTGGTTGTGTATGCACTATATGGAGA
CTATCAACTGTTGCCACAGATTTGTATGGGAAATCGTCACTTCTAGGAGC
GCCGCAGTTCTTGATTTTCATCGTAATGAGCATATATACAACAAGCGTTG
TCTTAAAAGATGGCGGAAAACTTacaagaaagtgaagaaaatttaGTTAC
CAGTGTAACGAACGCAGATTTAGAAAGTTTCATAAACCATGATCCCGAAG
ATATTGTTTATAAGGAGTTCGAAAACGACCCAAATGTAGCGACAGATCCT
CATTTTAAATGGAAATGTatgaaaacagtttttttattgAACTTTTTTGG
TGCATTTGGTGTTGGTCTGCTATCAATATTATGCGTCTATTTCGACCTGA
ATTTCAGTAACCTTTGTGACTCTACGAAATGGATAAATTTAccacataac
atcaaaattgCACACTTGTACAGTAAAGCTGCTTCTGATCAAATCTATCT
ATTTTGGTATGTCATAAACCTTTTGCTCGTTTTTGAAGTGTCGAAAATTC
AAAGACAAGTCTTGATACTGGCAAACTTATTGGCTGGTTGTGTATGCACT
ATATGGAGACTATCAACTGTTGCCACAGATTTGTATGGGAAATCGTCACT
TCTAGGAGCGCCGCAGTTCTTGATTTTCATCGTAATGAGCATATATACAA
CAAGCGTTGTCTTAAAAGAAAGAATAACAACTGGTTTTTGGAGACGTCTC
ATCGTGACGCTGAACGTCAACAACCAAATTATCATAGCTTTCGTTTTTTA
TCTGGTCCATTTCTACGTCATCTTGCCGACATTCATCAAAGCGTCAATCT
ACATTCGCCTGGCGATGGCATTCTTTATACCGATTGTCGGATACGGTGCA
CGAATTTTATGTCGTGTTTGTCTTCAACACATAAAGCATATACTACACCC
AGGACGGTTGTATATTCTTTCAGCAGGGCTGCATGCATTAACAGTGACTT
TATATCGGATCTTACAAGCCAGTGTCCAATCAACGTGGGCTTTTATTGCT
CTCGGATTGGCTCATTCTGTGGTTGGTTTCATCGATAAAATATCAGTTCT
TTACCAACGATCAGCTTTATCATTTGTATGCAGAAAGTTTTGTTTTCGAG
TATATAGAGTAAAACGAAACCCAAGAGAAATGCGTGAGTCAgcagatatt
ttgattttgaatttggTATATGAGTTATGGGGAGTTATGATCACATGTTT
CACATATACGTTATATGCTGTTCAACATTCGATACCTTTGAatccaaaaa
tcgaaaaggaATACACTCAGGGACCAGTTATTCGAGATTTGATGTATCGA
ATCATTTTTACAATTTGTGTGGAAACAATTTCGTCTACCCTGGCTGTATT
TTGGGTCATCAAGAAATCGAATTTCGCCATTATTAAGTTGTGGACTGTTA
AATGGAAATTATATTGTTTCGTTCTTGCAATGAACGCAATTTTCCCGTTG
ATATTAGCTTCCAAAACATTAGTAAACATAACAGAGGAAAGCTTCACTTT
ATTTTTAATAGACTCTGGAAGACAAGATTTAGCCTCGAAGTTGAAAATGT
GTAACTATACTTCAAGACCATATTAAAAAGAATAACAACTGGTTTTTGGA
GACGTCTCATCGTGACGCTGAACGTCAACAACCAAATTATCATAGCTTTC
GTTTTTTATCTGGTCCATTTCTACGTCATCTTGCCGACATTCATCAAAGC
GTCAATCTACATTCGCCTGGCGATGGCATTCTTTATACCGATTGTCGGAT
ACGGTGCACGAATTTTATGTCGTGTTTGTCTTCAACACATAAAGCATATA
CTACACCCAGGACGGTTGTATATTCTTTCAGCAGGGCTGCATGCATTAAC
AGTGACTTTATATCGGATCTTACAAGCCAGTGTCCAATCAACGTGGGCTT
TTATTGCTCTCGGATTGGCTCATTCTGTGGTTGGTTTCATCGATAAAATA
TCAGTTCTTTACCAACGATCAGCTTTATCATTTGTATGCAGAAAGTTTTG
TTTTCGAGTATATAGAGTAAAACGAAACCCAAGAGAAATGCGTGAGTCAg
cagatattttgattttgaatttggTATATGAGTTATGGGGAGTTATGATC
ACATGTTTCACATATACGTTATATGCTGTTCAACATTCGATACCTTTGAa
tccaaaaatcgaaaaggaATACACTCAGGGACCAGTTATTCGAGATTTGA
TGTATCGAATCATTTTTACAATTTGTGTGGAAACAATTTCGTCTACCCTG
GCTGTATTTTGGGTCATCAAGAAATCGAATTTCGCCATTATTAAGTTGTG
GACTGTTAAATGGAAATTATATTGTTTCGTTCTTGCAATGAACGCAATTT
TCCCGTTGATATTAGCTTCCAAAACATTAGTAAACATAACAGAGGAAAGC
TTCACTTTATTTTTAATAGACTCTGGAAGACAAGATTTAGCCTCGAAGTT
GAAAATGTGTAACTATACTTCAAGACCATATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:494127..497257 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 562-1467:2226 |
| Aaloc | 1-558:1 |
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