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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000338_pilon:5962..7626+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009957 ID=XLOC_009957|Name=XLOC_009957|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1665bp|location=Sequence derived from alignment at sc0000338_pilon:5962..7626+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGATATCTATTACAACAAAACTTATGATGTCTTAAAGAAGACAAGCAA
GTTTTGTTTGAGAAGAAAGACAATGACATTGGAATGGGATAGTTTCCTCA
CATAtgaaaatactcaaaaagtaTTCACAGAGCATATTAAACCTTTTCTG
AATAACAGTGCGGTTCGAAAATCCGTTATTTTATTCTTTGGCGCACCGTC
AAAAACTCGAGAAGTTGCAAAACTAATGAGATACAATgactccattttgg
ctgatcgAATATTCCTGTTCCAAGATATAGGCCATTTATCAGGTGACAAT
TCAAACATAATTAAATTGTATTATGCAAAGAGGAGTGCATTACAGTACAT
AAGAAGTATTAATGACTATACCATTTCCAATTTGGAAGATAGCATTTATA
AAATACTGACCGAAGTAAAACGAGCTGTTTCATTACAACCAACACACAGT
GGTTTACTTCATGAGGTCTACCGATATAATATAAAGAGAGCCTATCAGCT
AAACTATATCATCCCTGCAGTAAAGCAGATTTGGCCTGAAGAAAACATTC
CATTAGAATCAGAAAAGTATCTAAAAAGTGTCAAATTTGATCTAGCTCAC
TGCCAGCCGGATCTGACATGCGCGCCAGGTCACCACAAACAATATGGAAT
TGTTAATTTTACTCCACATGCAGACGAAGAATATTCATTCAGATGTGACT
TTTGTCCTTTGAATACTATCAAAATTGGGTTTGGCGATGGCCCATGCCTG
CCTTGTATTGGTAAGTTCAACATAGATAATGGAAAAAGAACAGCATGCGT
AGATCCGTTTACTGATGTTAAACTACTTTTCAACGACTTTCAACAATACA
CGACTGTCGCTTTTGCTAGTGCCGGTGCTTTAATCAATACCGGCataata
atactttttGTCATCAAACGAGAAACTCCAATTGTTCGTTCATCTGACAA
AACATTGTCCTTCTTACATCTCACCTCCTTGTTAGGCGTATTCTTTGGAA
TAAATTTTCTATACAATCTGCCTTATCTTGAAGTAGAAACATGTATTGGA
AGAAACTTAATCTACAGTGTCACCTACACATTCCATGTGGCTTGCCTCTa
cacaaaatcacaaaaattggTCACTGCATTTTCATCGAATATCCGACTTA
GTGCCGGCGTTGTTCGTAACACATTTCTGACTCAGATTTCAACAATCATC
ATTGTGGGCATTTCTTTAAATGGCATCTTATTTATTTCATATGTACAAAC
AGAACCGAGGCTTATCTTCCTGGAAGATAGCACAACGATGACTAGAAACC
ATTTCTGCAACacacattttcatcaaaatatacaAATCTTACTTCTAACG
TCCGCCCAACTAACGTGTTCAGCTCAAGCTTATCGCTGCCGTAAATTACC
AGATTTTATGAACGAGGCAATGTCCTTTGTTTACACTATTTTGATTACAT
CAGTGTCATTTGGCGTCAGTTTCCCCGTGTCGTATTTCCGACAAGATCCG
TTGGATAAAGAGTTTGTCGGTGCTTCAGTTTTATTGATCAATTGTTATGT
GACTTTGTTGTTAATGTACGGCAAGAAATCCTTTATCATGCTctttcaac
cgaaaaaaaacacCAGAGAATATTTCCACAGGAAGAGGATGGAACACACT
GGATGCCATTCTTGA Coding sequence (CDS) from alignment at sc0000338_pilon:5962..7626+ >XLOC_009957 ID=XLOC_009957|Name=XLOC_009957|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3330bp|location=Sequence derived from alignment at sc0000338_pilon:5962..7626+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGATATCTATTACAACAAAACTTATGATGTCTTAAAGAAGACAAGCAA
GTTTTGTTTGAGAAGAAAGACAATGACATTGGAATGGGATAGTTTCCTCA
CATAtgaaaatactcaaaaagtaTTCACAGAGCATATTAAACCTTTTCTG
AATAACAGTGCGGTTCGAAAATCCGTTATTTTATTCTTTGGCGCACCGTC
AAAAACTCGAGAAGTTGCAAAACTAATGAGATACAATgactccattttgg
ctgatcgAATATTCCTGTTCCAAGATATAGGCCATTTATCAGGTGACAAT
TCAAACATAATTAAATTGTATTATGCAAAGAGGAGTGCATTACAGTACAT
AAGAAGTATTAATGACTATACCATTTCCAATTTGGAAGATAGCATTTATA
AAATACTGACCGAAGTAAAACGAGCTGTTTCATTACAACCAACACACAGT
GGTTTACTTCATGAGGTCTACCGATATAATATAAAGAGAGCCTATCAGCT
AAACTATATCATCCCTGCAGTAAAGCAGATTTGGCCTGAAGAAAACATTC
CATTAGAATCAGAAAAGTATCTAAAAAGTGTCAAATTTGATCTAGCTCAC
TGCCAGCCGGATCTGACATGCGCGCCAGGTCACCACAAACAATATGGAAT
TGTTAATTTTACTCCACATGCAGACGAAGAATATTCATTCAGATGTGACT
TTTGTCCTTTGAATACTATCAAAATTGGGTTTGGCGATGGCCCATGCCTG
CCTTGTATTGGTAAGTTCAACATAGATAATGGAAAAAGAACAGCATGCGT
AGATCCGTTTACTGATGTTAAACTACTTTTCAACGACTTTCAACAATACA
CGACTGTCGCTTTTGCTAGTGCCGGTGCTTTAATCAATACCGGCataata
atactttttGTCATCAAACGAGAAACTCCAATTGTTCGTTCATCTGACAA
AACATTGTCCTTCTTACATCTCACCTCCTTGTTAGGCGTATTCTTTGGAA
TAAATTTTCTATACAATCTGCCTTATCTTGAAGTAGAAACATGTATTGGA
AGAAACTTAATCTACAGTGTCACCTACACATTCCATGTGGCTTGCCTCTa
cacaaaatcacaaaaattggTCACTGCATTTTCATCGAATATCCGACTTA
GTGCCGGCGTTGTTCGTAACACATTTCTGACTCAGATTTCAACAATCATC
ATTGTGGGCATTTCTTTAAATGGCATCTTATTTATTTCATATGTACAAAC
AGAACCGAGGCTTATCTTCCTGGAAGATAGCACAACGATGACTAGAAACC
ATTTCTGCAACacacattttcatcaaaatatacaAATCTTACTTCTAACG
TCCGCCCAACTAACGTGTTCAGCTCAAGCTTATCGCTGCCGTAAATTACC
AGATTTTATGAACGAGGCAATGTCCTTTGTTTACACTATTTTGATTACAT
CAGTGTCATTTGGCGTCAGTTTCCCCGTGTCGTATTTCCGACAAGATCCG
TTGGATAAAGAGTTTGTCGGTGCTTCAGTTTTATTGATCAATTGTTATGT
GACTTTGTTGTTAATGTACGGCAAGAAATCCTTTATCATGCTctttcaac
cgaaaaaaaacacCAGAGAATATTTCCACAGGAAGAGGATGGAACACACT
GGATGCCATTCTTGATATGATATCTATTACAACAAAACTTATGATGTCTT
AAAGAAGACAAGCAAGTTTTGTTTGAGAAGAAAGACAATGACATTGGAAT
GGGATAGTTTCCTCACATAtgaaaatactcaaaaagtaTTCACAGAGCAT
ATTAAACCTTTTCTGAATAACAGTGCGGTTCGAAAATCCGTTATTTTATT
CTTTGGCGCACCGTCAAAAACTCGAGAAGTTGCAAAACTAATGAGATACA
ATgactccattttggctgatcgAATATTCCTGTTCCAAGATATAGGCCAT
TTATCAGGTGACAATTCAAACATAATTAAATTGTATTATGCAAAGAGGAG
TGCATTACAGTACATAAGAAGTATTAATGACTATACCATTTCCAATTTGG
AAGATAGCATTTATAAAATACTGACCGAAGTAAAACGAGCTGTTTCATTA
CAACCAACACACAGTGGTTTACTTCATGAGGTCTACCGATATAATATAAA
GAGAGCCTATCAGCTAAACTATATCATCCCTGCAGTAAAGCAGATTTGGC
CTGAAGAAAACATTCCATTAGAATCAGAAAAGTATCTAAAAAGTGTCAAA
TTTGATCTAGCTCACTGCCAGCCGGATCTGACATGCGCGCCAGGTCACCA
CAAACAATATGGAATTGTTAATTTTACTCCACATGCAGACGAAGAATATT
CATTCAGATGTGACTTTTGTCCTTTGAATACTATCAAAATTGGGTTTGGC
GATGGCCCATGCCTGCCTTGTATTGGTAAGTTCAACATAGATAATGGAAA
AAGAACAGCATGCGTAGATCCGTTTACTGATGTTAAACTACTTTTCAACG
ACTTTCAACAATACACGACTGTCGCTTTTGCTAGTGCCGGTGCTTTAATC
AATACCGGCataataatactttttGTCATCAAACGAGAAACTCCAATTGT
TCGTTCATCTGACAAAACATTGTCCTTCTTACATCTCACCTCCTTGTTAG
GCGTATTCTTTGGAATAAATTTTCTATACAATCTGCCTTATCTTGAAGTA
GAAACATGTATTGGAAGAAACTTAATCTACAGTGTCACCTACACATTCCA
TGTGGCTTGCCTCTacacaaaatcacaaaaattggTCACTGCATTTTCAT
CGAATATCCGACTTAGTGCCGGCGTTGTTCGTAACACATTTCTGACTCAG
ATTTCAACAATCATCATTGTGGGCATTTCTTTAAATGGCATCTTATTTAT
TTCATATGTACAAACAGAACCGAGGCTTATCTTCCTGGAAGATAGCACAA
CGATGACTAGAAACCATTTCTGCAACacacattttcatcaaaatatacaA
ATCTTACTTCTAACGTCCGCCCAACTAACGTGTTCAGCTCAAGCTTATCG
CTGCCGTAAATTACCAGATTTTATGAACGAGGCAATGTCCTTTGTTTACA
CTATTTTGATTACATCAGTGTCATTTGGCGTCAGTTTCCCCGTGTCGTAT
TTCCGACAAGATCCGTTGGATAAAGAGTTTGTCGGTGCTTCAGTTTTATT
GATCAATTGTTATGTGACTTTGTTGTTAATGTACGGCAAGAAATCCTTTA
TCATGCTctttcaaccgaaaaaaaacacCAGAGAATATTTCCACAGGAAG
AGGATGGAACACACTGGATGCCATTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338_pilon | genome | sc0000338_pilon:5962..7626 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1665:1 |
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