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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000338_pilon:146306..148588- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009941 ID=XLOC_009941|Name=XLOC_009941|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2283bp|location=Sequence derived from alignment at sc0000338_pilon:146306..148588- (Clytia hemisphaerica_ch_hm2_pilon)
TTGATTGATTACATTCTAACGCAATGTCAGCTTAATATTTTTACAGGTGA
ACATTATAAAAAAATAAAAAACGAAACAAAAACAGTGCAACAAATGAGAT
TGAAGATTTTATGGGGATTGAAATGGAAGCAACCAAGTTTCTTTGGATGT
TGTCACCATTACAAAAGATCAATACATCATAAAATCGCACGTGATGATAA
ATTTGTTCCCAAAAGTCACCAACCCTCAGAAGACACTATTAGGACATTAT
CAGACTTTATAAACAGCTCTCGGAGACTTTTTGTTCTGACCGGTGCTGGA
TTATCGACGGAGTCCGGCATCAGAGATTACCGATCCGAAGGAGTCGGGCA
GTATTCAATAACTACGGATAGACCTACACAGCATATTGATTTCGTTAAGA
GTCCAAACAAGAGACAACGGTACTGGGCTCGTAATTTTGCCGGATGGCCC
GTCTTCCGTAACTTTCAACCCAATATTAATCATATGGTTATTGCGGAGAT
GGAGAAATACGGAAATGTTCATTGGTTGGTCACGCAGAATGTTGATGGTT
TGCACTATAAAGCTGGATCATCCAAAATAACGGAATTACATGGCTCCACT
GCACGGTAAGTGTCAGTATTACAATATTATTATTTTTTTAACGGAAAAAC
CCTCGAACTTTGCTCCCAATTCGGAAAATCCCGTTTTCTCCTGGTTTCTT
AGAAGAGGGGCCATGTTTTTCAGGCAAGACAGTTGTGTGTCAAAGAATCA
CTTACTTGACTCGTCAGCAAAGAATGCACCACAAAGTTCTTAACAGTTAA
AGGGTTTCATGGGAAAATAACCGAACGCTTTTAAAGGTTTTGTTTTTAAA
TAAGAGTGATATTAAAGGAAGAAATTTTGGCGGGAAGAAAATTTGGCGGA
TTTGGTCAAAATCCGCCAAATTAAGTTCCCGCCAAATTTAATTTTTTCCG
TCATCCGCCAAATTAAATTCCCGCCAAATTTAAGTTGCTCTATTTATTCC
CCCAAATGTGTGCTATTTCAGGCCTTAAAATAGGCTTTTCCTTTTATAAT
GGCGTTTTTTGGACAAAAATGTCCTTCGTCCGCCAAATTTAATTTTTCAA
GTTAACTGCCAAATTAAATTCCCTCTGCAAAAACTTTTTCGGCAATTTTC
CTTTAATGTACAAGCTTTATTAGCGATATTGAATTGACACGGATGTGGAG
CAAGTTTGGTTAGAAAGAGGAAAAGAAAAATCATTTTTTGCTTGTGTCAG
TACAATATAACAATAGGCAGGCACTGTCCTGATATGAAACACGTGTCTGA
TATGAAACGGGAACACTTATGTGAAAAGAAAACCTTTAATGAAGTTGAGA
AATTTGCAAAAATTTTCAACTCTAAAACTTGAACAAACTAAAAATTTCAT
TCAAAGAACAACTTTACAAGAAAAAGATCTACGGGTGAGAAGACACTCCC
CTTCATCCGCACACCATCAGATAGACTATTTTCTGGAAGTTTTACAGGAC
TTCACCCGGGGGGGGGGTCACTCGGACATTCCCGTCACCTCGCAAGCCTA
GTACCCCAGCTTTGCAAGGTGACAGGTATGTCCAAGCGAAAAATCGAAAA
TCGACCCTTATAAACAAGAAAAATTGGCATTTTTGAGACACTTACAGAAG
CCTTTCCCAAAATGAGATATTGTTTTTGTACCTATGAAAGACTTTCGAGG
GTGTGAAAAAGGGACTCTTATGGCTCGTACACTTTGCGTAAGTATCCCCC
GCCCCCGGACTTCGTCCAAATTTCCTGGTTTGTGAAATGTGTAAAGACAT
TTTAATGTTCCTTATTTTCTATATTCTAGTGTTGGTTGTTTATCATGTGA
CTTCGAAATATCACGTGACAATCTCCAAAAAATCTTGCTACGTCACAACA
TCTGGGACGAAGCTAACATTGGGCGACAATCCCCTGATGCCGACGTCGTA
GTGCCAAATCATGCGGTCGAGAATTTCAAAATGGTTGACTGTCCATCATG
TGGCGGAGTTTTGAAACCGAAAGTTGTTTTCTTCGGTGACAATGTAGCAG
CGAGTGTCAAAGACTTTATTTTCCAAAAATTAGATGAATCAGATAAAATG
TTAGTGGTTGGTTCGTCTCTACAAGTGTACTCAAGCTTTCGATTCATCCT
TGGAGCTAAGGAAAGGAATATTCCGATTGCCATTTTGAACATTGGAGAGA
CTAGAGGAGACAAACATTGCAATCTCAAAATCAATGCAAAAGCTGGTGAT
GTGTTGCCAAGGCTGTTGTTACCATGGAAATAA Coding sequence (CDS) from alignment at sc0000338_pilon:146306..148588- >XLOC_009941 ID=XLOC_009941|Name=XLOC_009941|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2118bp|location=Sequence derived from alignment at sc0000338_pilon:146306..148588- (Clytia hemisphaerica_ch_hm2_pilon)
TTGATTGATTACATTCTAACGCAATGTCAGCTTAATATTTTTACAGGTGA
ACATTATAAAAAAATAAAAAACGAAACAAAAACAGTGCAACAAATGAGAT
TGAAGATTTTATGGGGATTGAAATGGAAGCAACCAAGTTTCTTTGGATGT
TGTCACCATTACAAAAGATCAATACATCATAAAATCGCACGTGATGATAA
ATTTGTTCCCAAAAGTCACCAACCCTCAGAAGACACTATTAGGACATTAT
CAGACTTTATAAACAGCTCTCGGAGACTTTTTGTTCTGACCGGTGCTGGA
TTATCGACGGAGTCCGGCATCAGAGATTACCGATCCGAAGGAGTCGGGCA
GTATTCAATAACTACGGATAGACCTACACAGCATATTGATTTCGTTAAGA
GTCCAAACAAGAGACAACGGTACTGGGCTCGTAATTTTGCCGGATGGCCC
GTCTTCCGTAACTTTCAACCCAATATTAATCATATGGTTATTGCGGAGAT
GGAGAAATACGGAAATGTTCATTGGTTGGTCACGCAGAATGTTGATGGTT
TGCACTATAAAGCTGGATCATCCAAAATAACGGAATTACATGGCTCCACT
GCACGTTGATTGATTACATTCTAACGCAATGTCAGCTTAATATTTTTACA
GGTGAACATTATAAAAAAATAAAAAACGAAACAAAAACAGTGCAACAAAT
GAGATTGAAGATTTTATGGGGATTGAAATGGAAGCAACCAAGTTTCTTTG
GATGTTGTCACCATTACAAAAGATCAATACATCATAAAATCGCACGTGAT
GATAAATTTGTTCCCAAAAGTCACCAACCCTCAGAAGACACTATTAGGAC
ATTATCAGACTTTATAAACAGCTCTCGGAGACTTTTTGTTCTGACCGGTG
CTGGATTATCGACGGAGTCCGGCATCAGAGATTACCGATCCGAAGGAGTC
GGGCAGTATTCAATAACTACGGATAGACCTACACAGCATATTGATTTCGT
TAAGAGTCCAAACAAGAGACAACGGTACTGGGCTCGTAATTTTGCCGGAT
GGCCCGTCTTCCGTAACTTTCAACCCAATATTAATCATATGGTTATTGCG
GAGATGGAGAAATACGGAAATGTTCATTGGTTGGTCACGCAGAATGTTGA
TGGTTTGCACTATAAAGCTGGATCATCCAAAATAACGGAATTACATGGCT
CCACTGCACGTGTTGGTTGTTTATCATGTGACTTCGAAATATCACGTGAC
AATCTCCAAAAAATCTTGCTACGTCACAACATCTGGGACGAAGCTAACAT
TGGGCGACAATCCCCTGATGCCGACGTCGTAGTGCCAAATCATGCGGTCG
AGAATTTCAAAATGGTTGACTGTCCATCATGTGGCGGAGTTTTGAAACCG
AAAGTTGTTTTCTTCGGTGACAATGTAGCAGCGAGTGTCAAAGACTTTAT
TTTCCAAAAATTAGATGAATCAGATAAAATGTTAGTGGTTGGTTCGTCTC
TACAAGTGTACTCAAGCTTTCGATTCATCCTTGGAGCTAAGGAAAGGAAT
ATTCCGATTGCCATTTTGAACATTGGAGAGACTAGAGGAGACAAACATTG
CAATCTCAAAATCAATGCAAAAGCTGGTGATGTGTTGCCAAGGCTGTTGT
TACCATGGAAATAATGTTGGTTGTTTATCATGTGACTTCGAAATATCACG
TGACAATCTCCAAAAAATCTTGCTACGTCACAACATCTGGGACGAAGCTA
ACATTGGGCGACAATCCCCTGATGCCGACGTCGTAGTGCCAAATCATGCG
GTCGAGAATTTCAAAATGGTTGACTGTCCATCATGTGGCGGAGTTTTGAA
ACCGAAAGTTGTTTTCTTCGGTGACAATGTAGCAGCGAGTGTCAAAGACT
TTATTTTCCAAAAATTAGATGAATCAGATAAAATGTTAGTGGTTGGTTCG
TCTCTACAAGTGTACTCAAGCTTTCGATTCATCCTTGGAGCTAAGGAAAG
GAATATTCCGATTGCCATTTTGAACATTGGAGAGACTAGAGGAGACAAAC
ATTGCAATCTCAAAATCAATGCAAAAGCTGGTGATGTGTTGCCAAGGCTG
TTGTTACCATGGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338_pilon | genome | sc0000338_pilon:146306..148588 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 607-1059:454 |
| Aaloc | 1-603:2284 |
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