XLOC_009936.3 (mRNA) -

Overview
NameXLOC_009936.3
Unique NameXLOC_009936.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:1221156..1221678-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009936.3 ID=XLOC_009936.3|Name=XLOC_009936.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=523bp|location=Sequence derived from alignment at sc0000098_pilon:1221156..1221678- (Clytia hemisphaerica_ch_hm2_pilon)
AAGACATACCAACTACACCGCCATTCAAAAACTTGCCGTAAATATAAAAA CACTCCCTGCAGGTTTTATTTTGGTAAATTTTTTTCTGAGAAAACAATAG TTTCTGAGCCCTTGCCACAAGAACTACCACATGAGGAAAGAGAAGCCATA CTTGCTCTGCGAAAAGAAGTTTTGACAAAAGTAAGGACTTACATCAATGA GAACCTTAATCCTGATAAAAGAAACTTTTTCAACCCTGATGGAGAAAATT TTAATCCAGTTCCTACCATCAATGAAGTCCTAGCTGAATTAGACATTCCA AAGGAAGATTATGAATATGCTCTCTCTGTATCTGAAGATGAAGATTTTCA CATTTACTTAAAACGCAATACAAATGCATGCTTTGTCAATAACTACTTTA CAGAAGGTCTTAAAGCTTGGCAAGCAAATCTGGATATTCAACCAGTATTT AATTATTACAAAGCTGCAACTTACATGTGTGCATATCTTTCTAAAACTGA AGATGAAATATCTCATGCTATGA

Coding sequence (CDS) from alignment at sc0000098_pilon:1221156..1221678-

>XLOC_009936.3 ID=XLOC_009936.3|Name=XLOC_009936.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1046bp|location=Sequence derived from alignment at sc0000098_pilon:1221156..1221678- (Clytia hemisphaerica_ch_hm2_pilon)
AAGACATACCAACTACACCGCCATTCAAAAACTTGCCGTAAATATAAAAA
CACTCCCTGCAGGTTTTATTTTGGTAAATTTTTTTCTGAGAAAACAATAG
TTTCTGAGCCCTTGCCACAAGAACTACCACATGAGGAAAGAGAAGCCATA
CTTGCTCTGCGAAAAGAAGTTTTGACAAAAGTAAGGACTTACATCAATGA
GAACCTTAATCCTGATAAAAGAAACTTTTTCAACCCTGATGGAGAAAATT
TTAATCCAGTTCCTACCATCAATGAAGTCCTAGCTGAATTAGACATTCCA
AAGGAAGATTATGAATATGCTCTCTCTGTATCTGAAGATGAAGATTTTCA
CATTTACTTAAAACGCAATACAAATGCATGCTTTGTCAATAACTACTTTA
CAGAAGGTCTTAAAGCTTGGCAAGCAAATCTGGATATTCAACCAGTATTT
AATTATTACAAAGCTGCAACTTACATGTGTGCATATCTTTCTAAAACTGA
AGATGAAATATCTCATGCTATGAAAGACATACCAACTACACCGCCATTCA
AAAACTTGCCGTAAATATAAAAACACTCCCTGCAGGTTTTATTTTGGTAA
ATTTTTTTCTGAGAAAACAATAGTTTCTGAGCCCTTGCCACAAGAACTAC
CACATGAGGAAAGAGAAGCCATACTTGCTCTGCGAAAAGAAGTTTTGACA
AAAGTAAGGACTTACATCAATGAGAACCTTAATCCTGATAAAAGAAACTT
TTTCAACCCTGATGGAGAAAATTTTAATCCAGTTCCTACCATCAATGAAG
TCCTAGCTGAATTAGACATTCCAAAGGAAGATTATGAATATGCTCTCTCT
GTATCTGAAGATGAAGATTTTCACATTTACTTAAAACGCAATACAAATGC
ATGCTTTGTCAATAACTACTTTACAGAAGGTCTTAAAGCTTGGCAAGCAA
ATCTGGATATTCAACCAGTATTTAATTATTACAAAGCTGCAACTTACATG
TGTGCATATCTTTCTAAAACTGAAGATGAAATATCTCATGCTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_009936.3XLOC_009936.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:1221156..1221678 -
Properties
Property NameValue
Aaloc385-522:139
Aaloc1-384:524