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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000338_pilon:37313..45044+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009933 ID=XLOC_009933|Name=XLOC_009933|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7732bp|location=Sequence derived from alignment at sc0000338_pilon:37313..45044+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGCAGTCAATTTGATGAAGAGCTGGAAGCTTTAGAGGCAATTTACAT
GGATGACTTGATTATCAACATTGATGAGTAtggaaatgttttttcatgAA
TACGGTTTCTGTATTAAATGTGTAGAAAAATATACGCTAGTTTGACATGT
CCCAggttatgattttttgcttCTTATATATTACTCAGAAAAAGGTTAAT
CATGAACTAAgatgggtcaaaaattttgtttcatatgtcataacttttga
tttcagACTTTAGACCAATTTTACGGATTATAATATACGATAGAGTTAAA
GTGTACTTCTTCATGTTGATTTACAAACAGATTGGCAACTCTACAAATGA
CACTCCATCCAGCGACAGCAGATGATGATGACAAGAAATTCGTTTGCTTG
ACTTTGATATGCACTGTAACAAAACAAGTATGactttttttctcttcatt
tttttgcatttgACTGAAAACTGTGTACTTTTTCCATTTCAATTCTTGTT
TGGTAAAATGTGTGCGCGATATACTAAATTGGTCCTTATATAGCTAAACA
TAAAAATTCAGTGTTTTTTACTCTTCAACTCTTCATAACATATTAAAAGT
TAATAACGAAGGTCATAGAAATATCTTTAACCTGCTTTAACTTGTATTTC
CCTACATGAAATGGCTGTCAATATTTcccttaaaaaatttctttttcggt
CCTTTTCAGTCTACAGAATGTCAGTTAGTCTGTATAATTTCTAGTTTCct
tgttttttcctttttcagtaTCCAGAAAATAAGCcatcttttgatttgaa
aaatccaaGAGGGCTTTCTGATGCTCATCTTGCTAGGTATGAAGGAAGCA
ATCTCTTTTCAACCtacaaattctttaaaatttcaatacGATCTGTCTCT
GGCTATAAATAACAAACAATTTATAGTATAGTTGAAGAATATAGAAGGCT
GTTCGTTTTTTCTGGTATAGTTTTAAGACAGGAACCAAAGGATTCTATGG
GAAAAGCAAATAGAAGGGGAAGATTTTATCTCTAGGATTTCTTACTTTCA
TCTGATgactttgaaattgtttttgaaaattcttgagtCCTCATTGGAAA
AGGCTATAATGATAAACCCACCTTccatttcttttgctttttagtATCAA
AGAAAATCTAGAAGCTTTGGCTGGTCAGAAGATTGGAGAAATGATGTTGT
ATGATTTGTTAGAGGTTCCATCTCTTTTCGATTCCCTCCAAAACTTGGAG
TCAATTTAAATACCAATACAATCAGCTAAATGGATTACTTTCAAACTGCA
ACAAAAAATCAGCTCGCAAAATGTGTCTGTGTTTCCTTTTAATTTCCTTT
TCTATCAAAGTTCATCTGTCGGGTTTTCACTTCCCGCATTGTTACCAtct
ccaaattcaacaaaatttgaaaaatgtgaagAATTCTGCctaatttattg
tttaaataaTTTTGTCTAAGACCTAAAAGTTTGCTTTGACCACTTTTCTA
CACCATCGAATACACATTTCAATGCTTACTCCTTTTTTACCATAGTATGC
GAGAGGAAGTTTGACTGACAACAATCACCCAAGTTGTGTTTGTCCCATTT
GTTTGGAATACTTCAAGGTTTGACCATTATAGACTATAGATCTTTGGTGT
TCGTTTTTCCCAACTACAGTTCTGCCAAAATGAGACCTGTTTGGTAAAAT
TGTGGTACGGCTAATGGAAACTTCATTTTCTgactgttcctgactgtttT
TTATTCTGGCAAGAACAGCACAAAATTGTCTCTTGAATTAGATAAACACA
AAAATAAtatccaaaacaaaaatatgatgCGCGAATATACCGTTACCATT
ATTGTATCTTCCTTCTCAGCCATTGGATCTTCAGattttatacattttat
tttgaacTGGATACCGTGATTgaagacattaaaaaaaacctttttgtaCA
CAAATGACCTAACAATGACACTTTAatcgttttcttttctttaaatacTA
GGAAGAAGAAAGTTTCTTTCGAACAGAATGTTACCATTACTTTCATTTCC
CATGCATACAAGGATATGTCAAAAGTGTAACTGAAAAGGTATAACTATAA
TTCATAGTTTTTCTTGTCTTAGAAATGAATCAGATCTTATTCATTATTTT
AGTTTCATTTAATCTAGTTATggtattttatttcatttcggCCTACAAAG
TCAAAAATGAGCctaattttcatggaaaataatgtttaagattttgacca
gTTTTTATATTTCGTCAATGAGTCATTTAGAGACCACAATTAGTATATgc
aattttgtaaataaaattgataaagtagttaaaaaaagttattgacaCGA
GTTAATGCAGTAGTTGTCATCCCGCGACTCACGTTAAACaaaaaaaGGTT
GGGAAAAATTTAATTCTACTGCActaaaggccggcgcaaatgaatccaac
atttgatccaacattattgttggatcaaatgttgggttCGTTTGcgcaag
tcataaaattgcaactttttaagaaaattgtttgaaatcatgttggatga
agtttgatcgccgtcaaacttttcatccaacattttttaatgagattgac
gtcacttttatgttggtttcaatgttggatgcatttgcgtaatcatgttg
gatgaaaatgtttgacgaTTCtgcgcaaatgacttttcatgcaacttttc
gaatttttccacgtgACTTTTCGTCCAACATTTTGTCCAACAATAAATTG
GAAATGTTGGCTtgaatgttggattcatttgcgccggccttaagTGTCTG
ttttcgtttattaaaaatttttatttgttttactttttttcagcaCATAT
GTCCAGTTTGTCGTTTGGAAATCAATGACAAGGATGTGGAAACTATTCTG
AACAATAATTCAAAACTTTCCATTGATTTTGAATCCGACAAAGTATGTTA
TATATtatttctatgacttttttaaataattgtaGATAAAAgtgcttttt
ctttcttaggCAAGTGTttgctaccttaagggaacttattttggcgaatt
taggcaaaattcgctaaaattagttcccgccaaaattaaatattttgctc
actcgccaaaattagttcccgccaaaataagttcccttacaGGTGGTTGC
ACCCCAAAACCCACGCAAAAAACCAGGGCGTTATATTATGAGCTGTGTTG
GTTATtggattatttttattataccattcaaaactttggacTAATAATGG
TTCTTCCTGGGGTATCTGATCATTCATATGcatctcttgatttttttaca
gGGCATTGAAGTTGGTACTAtttttttttGCGCACCCCAAAACCTGCAAA
CTATATTTTGGCTGTAATTTCATAAATAATAATGCTAGAAGTGTGttttt
ttGCATGCGATCTTCATATTCAATTGTCTTACTAGTGAAAATAAGTTTGC
AAGCTTAGTCTAAGCCATATACCCCAAAGTACTACAAAACCCACAATACA
GGCACCCCAAAACCCACATTggcattttcagaattttaaaaatttggacc
aagattccaaaaaaatactttctGAGGTTTTACTTTGATAGTTACTCCAC
CTATTAAGTCAATCATTTGATTGATAAGAAGCTTTATAGTTGATTTAAAC
ATACTTTATTGTCAacctatttttttaatttagtaaatataaaaaatgaa
gcCCAAGTTCTCTATGCGTATacaccagaaaaaaaatttcaaatcatcaa
ACCCATCGACGAAAGCTGGGGCATTGGTTGTAAGAAAGCAAacaagtgaa
aaagaaaaaaaattgaaggcaGCTGAGGCCTGGTGCAGAGCAAATGACAA
ACGTGGCTATGCAGCACTTAAAACAGGTCAATTGTGACACAGTCTCTATG
ACTCTTACAACTAAGAACAAGAGAGATGATATATAATCATCTTCATTTCA
GGTGATGTGTGCATGTGCCAAGTGATTTTCAAATCCATAGGAATAACAAG
TGCAATGGTCCCTCCTGTAGCTGCAGAAAAGATACCTAACCTTCTAATCA
GCACTGCCGAAAATGGAATTTCTACTCACGAAACCTTTCTTGCCGCTGCT
TGTGAATTTGATGACTACTTGGAGCTGAAAGGAGTTGAAAGGCCAGTAGT
TTTACTATCAGATGGGCATAGTTCTCGGCTGAACCACAAGGTTCTTGAAT
TCCTCCTCTCAAAACAAATACAGCTGTTTGTGACACCACCAGACACAACA
GGAGTAACTCAACTTTTGGACCAGTTAAACAAGAACATTCACCAagagta
tgaaaaagaaaaagcatcAATGTTTACTGACTTTAACACTTTAAGTCGAG
AAGCCTTTATGGTTATTCTAGCAAACATCTGGGAAAGGTTGGTATCACAT
CAACAAAACTAAGCGTAGAGATGATGCAGCAAGATAAATTTGAAAGGGCT
GCTGCAGTCGTCGATACAAATGATGACGATGCAAACTCGTCTGCAATTTC
AACATCATCAACTTTGTCCATGGTCTCTCCTGATAAAAGATGTGGCTCAT
CACAGTATTGGCAAGATAAATTCAACCAGGCCATGGGTATCATAGATGAA
TTGCATGAAAAGAGCATCGTGCTGAAAGAAATCCCTGGTTTCTTGCCTCT
GCAAAAGGTTAAACCAAAGCTGCCCATGGATCAATGAAGGCCAAACATGT
GCTCACTGTACTGAAAGACATCGAGAGTAAGAAACAAGAGCAAGTCAAAA
GTAAGTAAGCCACTGCCaaaaaaaGGAAGATACAAAACATGCATTTCTCA
AGTGCAAAGAGAAATGTATTTGTGAAAAACCAAAATGCGAAGCATTCGGG
CTGAAGCAATGTCCAGTGTGTCAGGGCATTTTGAAGTCAGCTTGTAGTAA
AGCCAAGTGCAAAGTTGATGGGATAACGCCAGTCATGATTGTTCCAGCAG
CAGCTACAGCAAGTTCTTCCAAAAGAGGAGAGCACCTGCTTCAGAAACCG
AGGAAAGTGAATCAGATTTTGTTGAATCCGATTTTGATGATACCGAGAAT
GAGAgtgattttgaaagtgaaacCAGCAACACGGATGATGTAAGGGTTGC
AGATATCTTAAGAGCAACTTGGAAAACACTCAGCCCTCCAGTGACTGAGG
ATTCTCTCTTGGGGAAGTGGTATGGTGTAGTGTATTGTACAAAAGCGCAT
TAGCAAGCTGTATGTTGGTAAAATCTGGAAACGTTTCTTGGCTGATGAAA
ACGGGCTTGCTGAGAAATTGGAAGTTAGGTGCTTGAAGCCCAAAGTAGGC
TTAGGTACCATTCTTGAAGATACACCAGCTCATTTGCCAGATGTGTCACT
GTTTAACTTAGCTGATGTGATTTATGGTCCTCTGAAAGTGGTTCctttaa
aatctgataaattcaATGTTCCAGATTATGAAAAAGCTGTCGAACATTTT
AACAATGTAAAGAGTATGGACAGAAACAGCattttttaggctattttcac
ttatttttttcatttttagttgaaaaatattgttgctattgaaAGAAATT
GTGTTTCATTCAGAGAAGGACTTCTTGAAATTGACCAgttgtttgttgat
tttttttatatattgactaatgtcatttttagaaaaatgcaccCCAAAAC
CCACAGtcgaaattttgagttttgggTCTGAATATCTCAAGATAGGCTAA
AGACTCAATTCCATTAGCTCTATTTTCGAAGATGGGTTATATGGGCTACC
AGAATTCACCATAATTGCAAACTTAGTCTCaagtttcattattttattgg
ctttttctcaaaaaacgtgtttttttcatgttttcttttttgacgttaca
GGTCTGTAATTTTCTGTAAGGAGCttgcaatatgaaaaattattgttttc
tgTTTATCCCTTTTACTAATGTATCTGGAAATGCATATTAACACTTAGTT
TCCCATAAGGAGTATAACTGACACTGCATTTTATGAAATTGTGGGTTTTG
GGGTACCGCGTGATTTTGGGGTGCAACCACCTGTAAGGTATTTTCTCAAT
CTCAGAAAACTTAAAAGTGTAGAAGCAGCAATTGATAACACAAATTCATA
ACAAaatgctgatgaagtcacgtAAGCGTTGGCAAAAATCTCAACCTAAG
CAGTCccttcaaatttttgttttctcaatCTCAGAATATGCGTATTATTC
ATAAACATCCCTATATATCACAGCGCCGGTGAATCTTTTTcccacagcgg
ggataaaatttctattgaattcccaatggggataaaattctattgttcca
aggttaaaaaaactCAGTTGCGACGGTTTagagtgtaatttttaatcatt
gaattttgattggggatggaatcaaagtcaatttcccagtgggactAGGG
CCTCAGTCGGtctttgacacaggggtgttcatAATGTCAGTTCATTTTCA
CTGCAATTCATTTTCATTGCAATTCATTTTCATTGCAGGAGACTTCTTAC
ACCAACACACACGAGTATAAGAAATGGTTAGCTCAATGTAAAGTGATGTA
TGACAAACAAAAGCAAAATGGAGGGATCATTGATTTGGATTATGAAAGGA
ACAAATATTTAATACCCTCTGTAAGATGTTTCTGTCATTGAACCAGGCGA
ATCTTTCATTACAAGAATAAGCTGTGCTTTTTATTTGAGAAATCTTTGAA
GCCGGCTTTTGTAGAGGCTACTCATTGACAATAGCTTATTTTTgtgtctt
tcatttttttaatcctTTCAATTCTAAAGAATATTAATGAAATAACTTTC
CGTCCAATTTTAAGGCTCCAACTCCAGTACCAAGTAACgaattagaaaat
gaagatcAGTCCACAGAACTCGAGTCACAAGCAAATACTCTGTTCGAACA
TGCCAACAACGTTTCTACAGAACCGAAgaaaccaaaaaataagaataagc
AGGGTAAATATGACCAAGGAAAAACAAGACAGAAAGAAAGTCGTTCGGTT
AAAGAATCTTCACATTCAAAACCGAACAAATCTTATCAGAAACAACATAA
AACTGGTGGTGATAGAAACGTTCAGCCTGTCAACAATCCTAAAGCATCGT
CCAATGGTCCTGATGAAAGACCTTCCAGCTccaaagccaagtccaaactc
ccaaaagagaaaaacgaaaaacagcaaacacaaaaagcgacaaacaacga
agagtcaaaacctagaaaaaaTACTGAGGGTAAAGATGATAGTCCaaaac
caaagccaagtaaaagcgtctctgaaaaggaaaaagataaaggcgttaaa
agTATACCTCAAAGACCTAAGGATTCCACCAGGCCTCCTTCCAAAAACCA
CGGGACTGGTATTCCAAGGGATGTTGATCAGGCTTCATCAAGTGGACTTG
Acaaagaaaatactgcaacaagctctaaaagtaaaaagaaacgtcacaaa
aagaaaactgaaacTCAACATCCGCATAAAGCGGAAGGGACGAATATTTC
TTCAGCAGGAGATCATCAAAAGACTGGGTCCAAGAAACCTTCTAAAGTAG
GTTGGGCGAATGTCCCTGCAAATACGTCATCGAACGATGATAAAGATTTC
CCTTCATTAGGAGGCACAAAAGACACACCTACAGATAGGGGTAAAGCAAC
TGTGACTGGCAGATGTGAACCAAAGCCGCCTCCAGGGTTTGAACGGAAAG
TCAGACCACCACCAGGGTTTAAACCTATTTAA Coding sequence (CDS) from alignment at sc0000338_pilon:37313..45044+ >XLOC_009933 ID=XLOC_009933|Name=XLOC_009933|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3240bp|location=Sequence derived from alignment at sc0000338_pilon:37313..45044+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGCAGTCAATTTGATGAAGAGCTGGAAGCTTTAGAGGCAATTTACAT
GGATGACTTGATTATCAACATTGATGATTTTGCAGTCAATTTGATGAAGA
GCTGGAAGCTTTAGAGGCAATTTACATGGATGACTTGATTATCAACATTG
ATGAATTGGCAACTCTACAAATGACACTCCATCCAGCGACAGCAGATGAT
GATGACAAGAAATTCGTTTGCTTGACTTTGATATGCACTGTAACAAAACA
AATTGGCAACTCTACAAATGACACTCCATCCAGCGACAGCAGATGATGAT
GACAAGAAATTCGTTTGCTTGACTTTGATATGCACTGTAACAAAACAAta
TCCAGAAAATAAGCcatcttttgatttgaaaaatccaaGAGGGCTTTCTG
ATGCTCATCTTGCTAGtaTCCAGAAAATAAGCcatcttttgatttgaaaa
atccaaGAGGGCTTTCTGATGCTCATCTTGCTAGtATCAAAGAAAATCTA
GAAGCTTTGGCTGGTCAGAAGATTGGAGAAATGATGTTGTATGATTTGTT
AGAGtATCAAAGAAAATCTAGAAGCTTTGGCTGGTCAGAAGATTGGAGAA
ATGATGTTGTATGATTTGTTAGAGTATGCGAGAGGAAGTTTGACTGACAA
CAATCACCCAAGTTGTGTTTGTCCCATTTGTTTGGAATACTTCAAGTATG
CGAGAGGAAGTTTGACTGACAACAATCACCCAAGTTGTGTTTGTCCCATT
TGTTTGGAATACTTCAAGGAAGAAGAAAGTTTCTTTCGAACAGAATGTTA
CCATTACTTTCATTTCCCATGCATACAAGGATATGTCAAAAGTGTAACTG
AAAAGGAAGAAGAAAGTTTCTTTCGAACAGAATGTTACCATTACTTTCAT
TTCCCATGCATACAAGGATATGTCAAAAGTGTAACTGAAAAGcaCATATG
TCCAGTTTGTCGTTTGGAAATCAATGACAAGGATGTGGAAACTATTCTGA
ACAATAATTCAAAACTTTCCATTGATTTTGAATCCGACAAAcaCATATGT
CCAGTTTGTCGTTTGGAAATCAATGACAAGGATGTGGAAACTATTCTGAA
CAATAATTCAAAACTTTCCATTGATTTTGAATCCGACAAAGAGACTTCTT
ACACCAACACACACGAGTATAAGAAATGGTTAGCTCAATGTAAAGTGATG
TATGACAAACAAAAGCAAAATGGAGGGATCATTGATTTGGATTATGAAAG
GAACAAATATTTAATACCCTCTGAGACTTCTTACACCAACACACACGAGT
ATAAGAAATGGTTAGCTCAATGTAAAGTGATGTATGACAAACAAAAGCAA
AATGGAGGGATCATTGATTTGGATTATGAAAGGAACAAATATTTAATACC
CTCTGCTCCAACTCCAGTACCAAGTAACgaattagaaaatgaagatcAGT
CCACAGAACTCGAGTCACAAGCAAATACTCTGTTCGAACATGCCAACAAC
GTTTCTACAGAACCGAAgaaaccaaaaaataagaataagcAGGGTAAATA
TGACCAAGGAAAAACAAGACAGAAAGAAAGTCGTTCGGTTAAAGAATCTT
CACATTCAAAACCGAACAAATCTTATCAGAAACAACATAAAACTGGTGGT
GATAGAAACGTTCAGCCTGTCAACAATCCTAAAGCATCGTCCAATGGTCC
TGATGAAAGACCTTCCAGCTccaaagccaagtccaaactcccaaaagaga
aaaacgaaaaacagcaaacacaaaaagcgacaaacaacgaagagtcaaaa
cctagaaaaaaTACTGAGGGTAAAGATGATAGTCCaaaaccaaagccaag
taaaagcgtctctgaaaaggaaaaagataaaggcgttaaaagTATACCTC
AAAGACCTAAGGATTCCACCAGGCCTCCTTCCAAAAACCACGGGACTGGT
ATTCCAAGGGATGTTGATCAGGCTTCATCAAGTGGACTTGAcaaagaaaa
tactgcaacaagctctaaaagtaaaaagaaacgtcacaaaaagaaaactg
aaacTCAACATCCGCATAAAGCGGAAGGGACGAATATTTCTTCAGCAGGA
GATCATCAAAAGACTGGGTCCAAGAAACCTTCTAAAGTAGGTTGGGCGAA
TGTCCCTGCAAATACGTCATCGAACGATGATAAAGATTTCCCTTCATTAG
GAGGCACAAAAGACACACCTACAGATAGGGGTAAAGCAACTGTGACTGGC
AGATGTGAACCAAAGCCGCCTCCAGGGTTTGAACGGAAAGTCAGACCACC
ACCAGGGTTTAAACCTATTTAAGCTCCAACTCCAGTACCAAGTAACgaat
tagaaaatgaagatcAGTCCACAGAACTCGAGTCACAAGCAAATACTCTG
TTCGAACATGCCAACAACGTTTCTACAGAACCGAAgaaaccaaaaaataa
gaataagcAGGGTAAATATGACCAAGGAAAAACAAGACAGAAAGAAAGTC
GTTCGGTTAAAGAATCTTCACATTCAAAACCGAACAAATCTTATCAGAAA
CAACATAAAACTGGTGGTGATAGAAACGTTCAGCCTGTCAACAATCCTAA
AGCATCGTCCAATGGTCCTGATGAAAGACCTTCCAGCTccaaagccaagt
ccaaactcccaaaagagaaaaacgaaaaacagcaaacacaaaaagcgaca
aacaacgaagagtcaaaacctagaaaaaaTACTGAGGGTAAAGATGATAG
TCCaaaaccaaagccaagtaaaagcgtctctgaaaaggaaaaagataaag
gcgttaaaagTATACCTCAAAGACCTAAGGATTCCACCAGGCCTCCTTCC
AAAAACCACGGGACTGGTATTCCAAGGGATGTTGATCAGGCTTCATCAAG
TGGACTTGAcaaagaaaatactgcaacaagctctaaaagtaaaaagaaac
gtcacaaaaagaaaactgaaacTCAACATCCGCATAAAGCGGAAGGGACG
AATATTTCTTCAGCAGGAGATCATCAAAAGACTGGGTCCAAGAAACCTTC
TAAAGTAGGTTGGGCGAATGTCCCTGCAAATACGTCATCGAACGATGATA
AAGATTTCCCTTCATTAGGAGGCACAAAAGACACACCTACAGATAGGGGT
AAAGCAACTGTGACTGGCAGATGTGAACCAAAGCCGCCTCCAGGGTTTGA
ACGGAAAGTCAGACCACCACCAGGGTTTAAACCTATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338_pilon | genome | sc0000338_pilon:37313..45044 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 709-1626:6815 |
| Aaloc | 577-708:6489 |
| Aaloc | 478-576:2844 |
| Aaloc | 391-477:2002 |
| Aaloc | 319-390:1546 |
| Aaloc | 250-318:1146 |
| Aaloc | 181-246:769 |
| Aaloc | 85-180:332 |
| Aaloc | 7-81:1 |
|
