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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:481092..487810- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009572 ID=XLOC_009572|Name=XLOC_009572|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6719bp|location=Sequence derived from alignment at sc0000083_pilon:481092..487810- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCTACCGCGTTAGTATCAGCATTCTACGACTTCAATGATGTTATTCA
ACAACAGGTTTGTCAAAATAAATCTTTTCCTCTTTCACAATGCGTGGGTA
CTTCCGTCCATTCAATTTTTTCCACTAAAAATGAAATGAAAATTGAATTT
TTCCATTTTTCCATTTTTGTTTTTAAATTGAAAATTGAAAAATGAAAAAT
TGAGATTCAATTTTCAATTTTTTATTTTTCTCCTATGTAGGCGAAGTTTC
TGCCCTTCTCCTCGTCGTCAGTGAAGTTTTATCATATGTGCCCCGTTCTG
TAGGATTGATGGTGATCTTTCGCGGTCAAGACAATATTTTAGTCCCAAGA
TTCTCTTCAGCCCGGCCGGTCACTCGTCCCGCCGGGGAAAAATCTCTGAA
GAATTAAAAAACACAAAAAATGAATTCGTTTTTCAATTTTCAATTTTTGT
CAGAAAAATGAAAAATGGAGATTTTTGTTCTTGCGGGTGACATTTCTGTC
ATCATGTTGTGCCATTCAGGTTGACGGGGGCTTGAAAATGACAAGAGTGC
AGTTTGGTTGCTTGCTTGCAGCCATCCTTTATATAACATTTCTATTACAT
ATTCACATATTACATATTACACAGTTAGACTCGATTTGTGTTAGTAATAG
TATGACTTTGAGGGTAATTTGGGAAAAATAGACGAAAAATAACCCTCATT
TTAATCGGGCAATTTCAAAATACGTCAAAATGTATTTTCCCGAAATTTCT
AGAGAAGGTCATACTATTCCAGATTAATTGAATGACAGATTTCAACTAAG
TGCAAAAGCTTTTGTCTTCCAAACTTACCAGCTTAAACCCGTCCTTCACT
ATTTTGCTTCTTGCTCTTAATACGGTTAATAGATGCACAGCATAAACAAA
ATAACAAAACAGATGAAAAAGCGAAAAAGTTTTTTGTTGTACAAAAAAGA
TTCTAAAGGTTTGAATCCATCCTAGGGCACTGTTTACATCTATTTACATT
TTATCGGCACATTTTACGCCGGCTCTTATTGGCTTAATTTTTTCGTCGCT
GGCGTAATAAGGGTTGGTGTAAGGGGTCGGAATTAAATTAGGGACGGTGT
AACAAAAAATAAGTACTCCCCAGAAAAAAAGTACTCCCGAATTACTTATT
TTCCAGGATATAAATACGCCCGGTATTTTTTTCCCCATGAAATTCGTACC
CCCTCTGGGAAATTTGTACTCCCCTAATATGCGTCAAAATATGTTGAGAA
TTTTGGTTATTTCTTCGTTTTTCGAAATTTGAAGTTTTGGCAAAGGAGTC
ACTTTTAATTTTTGTTAAATATAATCCAGTGTTTCAATATGGGACGCCTT
ACTGGACTATTCTTGAACCTTTTGGATCTTATAATCTAGCGTTCCATATT
TTATTGTGGCTATAAGATTTCGTGAGAATTTCCCTTTTTTCTCAAATATT
ACGATCTTAATTGTAAAAAATACCTTAACCCTATTTGGTCTAGCATGGGC
CGAGGGGGGGGGGCTGTTTCTGTTCGGAGGTCAAATTATTGGTAGTAGCT
ACTGAAATAATAGAGCTTTTGCCATGAAATTTTCTGTAAATTCCTAACTT
TTATTTAGCTTCAATATAAAAAAGATTCGACACATAAAATTTTTCACACC
TTGAGCATGATAACATCTCTGACAGTAAGGTGTCACAAAAATTGACACTT
TTCCAAAACAACTTTTTTATGTCAAATAAACTATCAATTTAGCAAGTAGA
ATCTTCAAAACCATCAATTTTACAAGCATGATCTTCAAAACAATTAATTC
TACAAGTGAGATCTTCAAAACCTTCAATTTACAAGTAGGATCTTCAAAAC
CATCAAATTTACAAATAGGATCTTTGAAACCATCAATTCTACAAGTAGGA
TCTTCAAGACAATCACTTCTACAACTTAGGATCTTCAAAACCATCAATTT
TACAATAGGATTCAAACCCATCAATTTTAAAGTAGGATCTTCAAAACCTC
CAATTTTACAATATAGGATTTTCAAATCCATCAATTGTACAAGTAGGATC
TCCAAAGGCATCAATTCTGCAAGTAGGATCTTCAAAAACATTAATTTTAC
AAATAGGATCACCAAAACTATCTATTTTTACAAACAGATTTTTCAAAACC
ATCAACTTCCCAAGTAGGATCCTAAAAACCATTATCATTATTCCAAGTAG
GATCTGCAAAACCATCAACCTTACAAATAGGATCTTTAAAACTATCAATC
ATACAACAGAACAACGGCAGCAAGAATCTTTAAGACCATAAATTCTACAA
CAAAAATCTTCAAAACCAACCCTTCTACAACAAGAATCTTCAAAACCATC
ACTTCTACAACAAGAATTTTCAAGACCGTCACTTCTACAACAAGAATTTT
CAAGACCATCACTTGTACAACTAGGATCTTCAAAACCATCCATTTTAAAA
ATAGGATCTTCAAAACCATCGTGTTTAATTAAAAGCAGGATCTTCAAATC
GTCAATTCTAGAAGTAGGATCTTCCAAACCATCAATTAAACGTAAAATCC
TCAAAACCATCTATCTTACAAATAGAATCTTCAAAACCATGTAGTTTACA
AGTAGTTACTTGATTCTATAATTAGTTTCTTCAAAACCATCAATTCTAAT
TGTAGCATAAGTTATCAGGTATTTAAAGAACAACTCTCTTGCAAAAATGA
TCCTTTAAGGTGTGTGTATAGTTTCTGTTGGGGGTGTGAAATATACATTG
CCCCCACATTGCCTTTTTACGCTAGCTTTGTTGAAGCCCAAAAAGGGCAT
TTAGATGAAAGCGTTCTTTCATGTCTATGCGGCTGGTAGGATATGAAAAT
TTCATCCCACTTTTTGGTAGGGTATGAAATTTTTTTGAGAATTTTTGATT
GGGTACGAAAACAAAAATATCACCGAAAAAATCCCTTCCACCCCGGTATA
TGCTATACAAGTTTTACAGGATTTCTTTTAGAAAAAAAAATTGAGACACA
AAATTAGAGGCTTATTTTAAAGCTAAAACTTTACCCTCGGGGCGGGGGTA
AAGGGTTTCCGATGGGGAGTACTTTTTTTTCTGGAGGGGATGACAATTTC
CTGGGAGAAATGTACTTCCGGGAGTATATTTTTGAACTCGCCAAGCTTTA
AGCTTTCCAAAGATGTAAAAATAACGTTTATACAACCTATCTATAAAAAG
TTGAATTTTTCTTCTTCATTTTTTTTCATGTTACCTTATCGGGGAAAATA
ATTTTGGAGTTTTATTTAGTCGGGTTTTTTTTCGTCGGGGAAAAGTTTCG
TCACCTAGAGGTATTTTCGTCACTTTCCCCCGACCAAAATTTTAAATTCG
TCACTTTTCCCCGACGAAATTTACAATTTAGTCACTTTCACCCATCTAAA
TTGTCCAAATTAAATGGTTTCCTTTAGTAGCTCGAAAAAAGATCTTGTAA
TTCGACGTTTAAAGCACTAATTTTGGTTAATAAAGGTGTAAACAATTTAG
ATTTGAATTTTGGTTGGGGTTTAAAAAATTGGGTAAAAGTTTTGGTCGGG
GATAAAAAAATCGGGTAAATTGTTTGGTCGGATGATAAAATATCGGGGAA
AAATTTCATCTTGGGAAAATTTCGTCACTTTCCCCCGACATTTTTTTCCC
CGATAAGGTATTTTCAAATTTTACGGAAAAACTAACAGTAGATTAATAAG
CTCCTTCCTACTTACATAGCAAACTTTTTAAGATTAGCATTGGTTGAGAA
GTAACAAGTAAAAGCGCAAAATTTAGTGCACACTTATCGTGAATAGACTT
TAGATTCAAGCTTCCAGTTCCTTAATGGGAATTTTAGCTTTCAGCTGGTT
GGAAAAATTTCCTGATTTGAAGGTAACCAACTAATTCAATCTTACCAATT
TTGATTAAAGATCAAGTTTTCAATCGTTTAAAATGTTTAGATGGAGACAT
TTTTACTTTTATCCATATTTTGAAATGTGGACTTTTCACTGGTTGCAAAG
TTACAAATATGATTTTGTGGAAAGATGGTAAGGTAACCATTCTAACTTTC
CAATTGATGCGAAAAGTCCTATTTCCATTGGAAAGACATGGAAAATTGAA
ATTCCCACGTATTTCCACCTATTCGGAAGATGGACTTTCTACTTATTAGA
AAGTTGGAAAGGGAATCTTGTGTAATCTTTCCAATCGACGTGGAAAGACG
TGGAAATGTCACCTATTTAAAAAATGGTCAAAAAAATGGTCCAAAAAGAT
TCCAAAGCTCTATCTCAAACTTGCAGGGGATCGAAAATGAATTCCAGATA
AAGAGAGTTTGAGACAAAATAAAAACTTTCTTTTAAAGCCTGGATTCCCA
TCAAAATGAAGTTGGACTGTATAAAAAAGGTAACGAAAAGAATAATCAAG
CATTCCGGATGAGAGGAAATAGGAAATATTCAAGCCATCTTTGTGGCTCT
TGTTCTATCAATGTTATTAGTACCTTATTCTCATATACAACATTTCAAAC
CTTGTAAGATGTAATAAAGATGTTATAGGATAATTTGCATGAACTACGTC
ACCCTACTGGACTGAGCTTCACTCTTTGTCAAACCCCCGTCGAACCTGAG
TGACGCAACATGATGACAGAATGATGTCACCCACAAGTACAAAATAATGG
AAAATCGAAAATCGAATCTCCATTTTTCATTTCTCTGTTTTTGATTTTCA
AAAACAAAAAATGGAAAATTGAAAAACGAATTCATTTTTTTTTTTTTTAT
TTCTTCAGAGATTTTCCCCCAGGGCTGAAGAGAATTATGTGACTAAAATA
TTGTCTTGACCGCGAAAGATCACCATCGATCCTACAGAACGGGGCACACA
TGATAAAACTTCATTGATGACGAGGAGAAGGGCAAAAACTTCGCCTACAC
AGGAGAAAAATAAAAAATTGAAAATTGAATCTCAATTTTTCATTTTTCAA
TTTTCAATTTAAAAACAAAAATGGAAAAATGGAAAAATTCAATTTTCATT
TCATTTTTAGTGGAAAAAATTGAATGGACGGAAGTACCCACGCATTTTTC
ACTATCTTACTAATTTTTTTGTGTTTTTGTTCAGGATAGTGGCTTTTTGA
ACTTTCATTTTCACTTTTAGACTTTGTAAGTTTTTATAATTTTGAAAAAA
AAATTTGACATGAATTTTTTCTCTTGTCATTTTATTAGAGCTATGATACA
TATAACTTTTGGTTATGAGCTAGCGGTTTTCACAATTCATGTAACTTTAT
ATGAACATCGTTTAGATTAAAATTTGTGTGTTTTAAAATGCATTTTTTCT
CTCAGTTATCTATTTGTGGGAACATCTCATTTCTTTTCTCTTCAATAACT
TTACTTGTTTGTGCGGACTTAATCATTTTTTTTTTTACTAAATGGGTTAT
TCATCCTCGAAATAATTTCATGATAAGTGTTTTTTGTCTCTTGAGGCGAT
AAGCCTACTTTCTTTTTATAAAACACATGAAAAAATCGATCATTTTTTTA
TATGTGTGTTGTTCCATGTTTATCTCACAGAAAAATAAGAAATCAGAGAT
ATGATGAGAAAAAGTTTGTCTAAAGTTTTAAATGTAGAGCAAACGTATTT
GATTTAAAAATATAGTAAATGTATTTTGAACTTCTTATTTCTTTTGATTC
AAACTGATGATTTATTTGTTTATATTTTTAGAGCAAGCAACGACCAGCCA
TGTTAGATCTGCGTCAGCGACCACTAGAACAACGAAAACCAAGTAACTTA
TTGATATCTCGACGACACTCAACGAATTCTACAAATTTGAATAGTTTGGC
TTCACCATCATTCACCAAAACAAATCCGCTCTCACCATCTTCGAGCAGTT
TCTTTCCAATGCCATCGTCACCTAAAGACCCCTTTTTGAACGGTTGTGGT
TCAACCTTAGCATCTGCTCTCAACATGCGGGAACGTGCTCAAAGTGCAAG
CTTCCAAGAAGAACTCGACGCACAACACCGTAAACGTAGCGGTACAAACT
CAAGCCGTTACAAGACAGAACTTTGTCGTCCATTCGAAGAAAATGGTACT
TGTAAATATGGAGACAAGTGCCAATTTGCACATGGCTATCACGAACTTCG
TGGCTTAAACCGTCACCCTAAATACAAGACCGAATTCTGTCGTACTTATC
ACACTATCGGATTCTGTCCATACGGTCCGCGTTGTCACTTCATTCATAAT
GATGAGGAGAAACGTTTGGCCCAAGCAAGCACTGGTCGATCTGTTTCTAT
GTCCAGCATGGATTCAGCTCCCTCCTCCCCAGTCATTGACTTCGCTCCTT
CACCATTCAGCAACACACCACCTACTTCCCCTGGAGTTGGAGACGTCTTT
GTTTTTGACGAACCAACTGCTCAACAAAACCTTCCATCCATGAAATCATC
CCTGGCAAGTATGTCAACCATTCCGGAGATATCATCTCACCAGTTTGTAC
CGAACCACATCACTCGTAGCATCTCAGTTTCATCAGCTCTTCCTTCCAAA
ACACCTTCACCACCTAACCTCACTATTTCAAGCTTAATCACTGAAGGCAC
ACGGATCGAATCCAGACCAAACACTTTCCAACCCATTCAAATGAAATTGG
ACGAACGCAACATTTTGACTCCATCTGATTCTGGATCATCCAACCCACCT
TCTCCTACCGACTCTTTGGATGGCTCCAACCGACGTCGCTTGCCTGTTTT
TGGACTCATGAAACAATAA Coding sequence (CDS) from alignment at sc0000083_pilon:481092..487810- >XLOC_009572 ID=XLOC_009572|Name=XLOC_009572|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2190bp|location=Sequence derived from alignment at sc0000083_pilon:481092..487810- (Clytia hemisphaerica_ch_hm2_pilon) ATGTCTACCGCGTTAGTATCAGCATTCTACGACTTCAATGATGTTATTCA ACAACAGATGTCTACCGCGTTAGTATCAGCATTCTACGACTTCAATGATG TTATTCAACAACAGAGCAAGCAACGACCAGCCATGTTAGATCTGCGTCAG CGACCACTAGAACAACGAAAACCAAGTAACTTATTGATATCTCGACGACA CTCAACGAATTCTACAAATTTGAATAGTTTGGCTTCACCATCATTCACCA AAACAAATCCGCTCTCACCATCTTCGAGCAGTTTCTTTCCAATGCCATCG TCACCTAAAGACCCCTTTTTGAACGGTTGTGGTTCAACCTTAGCATCTGC TCTCAACATGCGGGAACGTGCTCAAAGTGCAAGCTTCCAAGAAGAACTCG ACGCACAACACCGTAAACGTAGCGGTACAAACTCAAGCCGTTACAAGACA GAACTTTGTCGTCCATTCGAAGAAAATGGTACTTGTAAATATGGAGACAA GTGCCAATTTGCACATGGCTATCACGAACTTCGTGGCTTAAACCGTCACC CTAAATACAAGACCGAATTCTGTCGTACTTATCACACTATCGGATTCTGT CCATACGGTCCGCGTTGTCACTTCATTCATAATGATGAGGAGAAACGTTT GGCCCAAGCAAGCACTGGTCGATCTGTTTCTATGTCCAGCATGGATTCAG CTCCCTCCTCCCCAGTCATTGACTTCGCTCCTTCACCATTCAGCAACACA CCACCTACTTCCCCTGGAGTTGGAGACGTCTTTGTTTTTGACGAACCAAC TGCTCAACAAAACCTTCCATCCATGAAATCATCCCTGGCAAGTATGTCAA CCATTCCGGAGATATCATCTCACCAGTTTGTACCGAACCACATCACTCGT AGCATCTCAGTTTCATCAGCTCTTCCTTCCAAAACACCTTCACCACCTAA CCTCACTATTTCAAGCTTAATCACTGAAGGCACACGGATCGAATCCAGAC CAAACACTTTCCAACCCATTCAAATGAAATTGGACGAACGCAACATTTTG ACTCCATCTGATTCTGGATCATCCAACCCACCTTCTCCTACCGACTCTTT GGATGGCTCCAACCGACGTCGCTTGCCTGTTTTTGGACTCATGAAACAAT AAAGCAAGCAACGACCAGCCATGTTAGATCTGCGTCAGCGACCACTAGAA CAACGAAAACCAAGTAACTTATTGATATCTCGACGACACTCAACGAATTC TACAAATTTGAATAGTTTGGCTTCACCATCATTCACCAAAACAAATCCGC TCTCACCATCTTCGAGCAGTTTCTTTCCAATGCCATCGTCACCTAAAGAC CCCTTTTTGAACGGTTGTGGTTCAACCTTAGCATCTGCTCTCAACATGCG GGAACGTGCTCAAAGTGCAAGCTTCCAAGAAGAACTCGACGCACAACACC GTAAACGTAGCGGTACAAACTCAAGCCGTTACAAGACAGAACTTTGTCGT CCATTCGAAGAAAATGGTACTTGTAAATATGGAGACAAGTGCCAATTTGC ACATGGCTATCACGAACTTCGTGGCTTAAACCGTCACCCTAAATACAAGA CCGAATTCTGTCGTACTTATCACACTATCGGATTCTGTCCATACGGTCCG CGTTGTCACTTCATTCATAATGATGAGGAGAAACGTTTGGCCCAAGCAAG CACTGGTCGATCTGTTTCTATGTCCAGCATGGATTCAGCTCCCTCCTCCC CAGTCATTGACTTCGCTCCTTCACCATTCAGCAACACACCACCTACTTCC CCTGGAGTTGGAGACGTCTTTGTTTTTGACGAACCAACTGCTCAACAAAA CCTTCCATCCATGAAATCATCCCTGGCAAGTATGTCAACCATTCCGGAGA TATCATCTCACCAGTTTGTACCGAACCACATCACTCGTAGCATCTCAGTT TCATCAGCTCTTCCTTCCAAAACACCTTCACCACCTAACCTCACTATTTC AAGCTTAATCACTGAAGGCACACGGATCGAATCCAGACCAAACACTTTCC AACCCATTCAAATGAAATTGGACGAACGCAACATTTTGACTCCATCTGAT TCTGGATCATCCAACCCACCTTCTCCTACCGACTCTTTGGATGGCTCCAA CCGACGTCGCTTGCCTGTTTTTGGACTCATGAAACAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000083_pilon | genome | sc0000083_pilon:481092..487810 - |
Properties
| Property Name | Value |
| Aaloc | 58-1095:1039 |
| Aaloc | 1-57:6720 |
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