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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:87775..92429+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009456 ID=XLOC_009456|Name=XLOC_009456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4655bp|location=Sequence derived from alignment at sc0000372_pilon:87775..92429+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCACAAGCAATCATGCGTAAGGAAAGAATGGAGGATATTTATGA
CATCAAAGAAGAACTTGGAAGGTAAGATAATCTTGCTCAGAACAAAGAAC
TAAGATAATAACTTTTCATCTTTATGCTCTTACCATGTCTCATAGAAAGT
TTATGTATCTATCATGTATCTATCTGaaataatttggaaaaaaaaaCaac
aaaaactcgaggacggtaaaagtgcgtAGTCCTTTGTCCTCACTCAAAGA
ATAAGAATAATTTCAGGCTGGAAGAtcttaaaaataagaacagttgcGCC
TCATATAAAATTCACTGGATCTTTTAATAAATAAACGAatgtaaataaaa
atatcataatTTTCTATCATCTCCATCTTGGAAATCTAGGGGTCATTTCG
CTGTGGTTAAGAAGTGCGTTTGCAAATCTTCTAACGACGACGTTGCTGGC
AAGTTtatcaaagtgaaaaaaacacgTGCTAGTCGGCAAGGAGCTGAACG
CGCCATTATTGAAAGAGAGGCTGAAATACTTCAAATGATAAATTGTGATA
AAGTGATGAAACTTTATGATGTTTTTGATCTTGGAAGTGAAATCGTTCTG
GTCATGGAGTTGTAAGTAACTGTTAATGACAAACTCTAACCCAGTCCTAT
AGTTtgctttttatgattctgaaaATACATCGCGCTCACGAAAGGCCACG
ATTGTATCAcctccatcagtaaaatcaaaagggGTTAAGTGTCTCTGGGT
ACGAGAAATTGTGTTTAATCTGGGAATACATGTATTTCAtattagcagat
tcatataaaaaagtcacgaaaaaacatCGAGTAGAGCTCTGATTGGTTGA
GACATGCAAAGATTACTTCATACTCtggaaattctgaaaaaaatatgctt
atgGTGTGCAATATgcagccaatcagagctttactcgacgttCTTCGTGT
TTATTTATGTGAATCCCATCTCATTAATAGAACTTTTCAACTTCTAGATT
AACTGGTGGTGAACTATTCGATAAACTTTGTGAAGAAGACTATTTGACAG
AAGAACAAGCATGTGATTACACTAAACAAGTTGTTCAAGGGATGGCCTAT
CTTCACTCAAAGAATATCATGCATCTCGATATAAAGGtaatataatttta
atgatttgagtttcattgttttcaagtcagaaaattcgaCGGGGGTGaaa
aaaaaGCACAATTTCTTTGTATAGTGAGAGTTTGTTTATTTGAGACAAAA
TGGAGAATGGTTTTCCActtgggacgatattttggccagttCTTGCAGTG
GGAGGGGCACCcaccgggtctatgagaagggggtgtactaGAAAGTAATA
GTTAAAGTAATCAAATAGAATCACATCACAAAAGTTAGCTACAGGATATT
CGGCTTGAAGTTCAAACTTTCTTGTCTTGTTTTGACAAGGAATTGGCACA
CAGTTGCTATACGTCTATGCCAATTAGAGTTGTCTGCATTAAAAGGAGTT
ATAATTGACAAAGTAAACTCTACACTGTCGAAAGGATAAGGCAATTAGAG
TATTAGTGTAAACGAAGAGTTTGAATGTGTTGAAATGAATAAATATATTG
ACTGGTACGCTTAATGTTAGGCAATATGAATAGCTTTGAAATGAATATGA
TTAAGCGATAATACAGTCGATTGCAAAAAAGACTAATCTTTGCAATAAGA
GGATATGAAATACAGTAATACTTTCGAACAAAATGCTACAGGTGTTAGGT
ACGGTTAAATGTGGTAGGCATGTTTTCGTGGTTCATACCCAAGtttaaat
aaaacttttcccagagtgaatttcgcaaaaatattttttacgatTGATCC
TCaaaaatgcgaaaaataaattccgcaaaaaaatcacgaaaagaTTGCAC
CTTCATCACTCGGGGTAATCAAAAGCAAAATGTCAGGGAGATCAAAGGAA
AATGGAGAGCAAAGGAAAAGCACCAGAAAatccacaaaaaagtttttatt
gaaattgtTGCTTACGTATGGTCGTACTACCTCAACAACTCATAGACATA
ATAAGCTCCCACACCATCATTggagaaattttattttcatctttttagcc
tgaaaacaTTGTTCTAAAGTCACCAGATTCGACGGAGATCAAGTTAGTGG
ATTTCGGTTTGGCACAATTATGGTCGCCTgataaagaaattaaagaaatg
aTGGGAACAGCAGAATTTGTAGCTCCAGAAATTGTCAATTACGAAAAGAT
TGGACTTTGCACTGATATGTGGTAATTCAATCTTTTGTGCCTATTGCTTT
CCGGTTTCAGTAGCCGGGTGATAGCCCGAAATGCTGTATTTGGCataaaa
aatttgtcaaaatgtGTCTTTTTATGACACCTTACCGCCTTCATAATACG
AATTAACATCTCTGGgcctcactggaaaattaagCTTCATTgtgattttg
ataaaacaaaaagcTCCACCGAAGCTGTGAAATAGGGGACAGTGGTGCAA
AAAGGGTTAAAATAATGTATTGTATTGACGTAAAAAGATGTTGACACAAA
ATCGATATAACTAGGTACAGGCACAGAGCGTTTCTTATCTGTAGTATTGA
AATTCATATGTCAGCATTAActttaaatctttttctcaTGTTTTAGGGCT
GTTGGTGTATTGGCGTACATTCTGTAAGTATTTCGATTGAAATATATCTT
TTTCAAACACACACTCTTTAGTGTCTAAAAGTTAAGAAATATGAGCTTAA
TTCTCAGGGAGAGGTTGAATATCTAAATGCCTCCAGAATGGATACATACT
AGTCAAACAACGTCAAATCTCTTTCACGTCACCAGACCCTTGCAAAACTC
GAACCCAACCCTATCTATATGCAACTGCTTGTTAGGTTTCTCTAATAAAA
TCGAACCAACACTGAAAGAACAAAAACCACCGTGTACTTATAAGCAacat
ttggcgagaattaattttggcaaataacCAAAAAATTCACGCCAGGAAAT
AATTGTGTAGCGGATCTAGCAAATTTTCGAGGCAATTCACCAGATTCAcc
gaaatttcttcccttaaagtgATTCAATTTACCCTTTTAAAAGGTTGAGT
GGAGAATCACCCTTCCTCGGTGACGACAATCAAGAGACGTTTCAAAACAT
CGCAAAAGCTGATTATGaatttgatgaagaaatttttgaagataTCTCCG
AAGATGCTATCGATTTTGTGAAAGGTCTGCTCATCAAAAATCCTGGGTAA
GTCTTGGAGTTAATATGAATGTTTAAGAAGAACTAAATTGTCTTATTAAA
AATAACTCTTTGATAAAGCTGCCTCTCTAAGAAGcttcttcgaattatag
agagccTTTATTGACTTTCTCAAAACTGAGAAATATATCAACCATTACAC
TACAAGGGAATTGGTTTACCAGGGCTAGTATGATGACGTCAAATGACTGA
AATCGTTTTGACATACTGGCGGATACAGACAATTGCCCCTTTCgtgaatt
acgtcacgaacatcacttgcctcgtactcaaacaattaccatggtgatga
tatcccttgagacattaaatgattttttatgaataggaagtagttttaat
aaaatccgctgggagttaatcaccatgacaataatttcaaaacgaggcaa
gtgatgttcgtaacgtaatttatgaaaaggtctattggcgTCATGAAGCA
CAAGTAAAACTTAACCCGATTTACTTTGTGTGGTAAGTGTTGATAAGTGT
ACTGTTGACTGTAGTTTCTTGTGACATTTAAATTTCTAGAAAACGAACAA
CAGCTCAAGACTGCTTATCGCATGAATGGATAAAACCTAAGGTAAAATGT
GACCAGCGCTCCTAAACGAGttcttaaaaaatgattttcaaaaatgcaaC
GTCTGCtgtcaatttttcaattcttcaaccAACACTAGACCTTACCAGGC
TCGTttagatttctaaaaataatttcaactgTCATTTCACCCCAAATTAC
TTACCAAGCCTATATTTCAACCGTATATTTCCAAACTTCCCAACCTATAA
AAGACACGGTCATCGATGTTATTttattgtacttctgaaaagtATCATGT
AATAATTGAGTTTTGCTACAAGGTAAagattttgacaattttccaTTATC
TTACATAGACGAATAAATTCCAAATGGTTCGAGTCATCATCAAAACAACA
CGATTGAAAGCTTTCGTTGCAAGACGAAAGTGGCAGGtaaaagaaacttt
gataataattctagagaattcttttgaacaaaggaaattttatggaaatt
GCTTTAAAAGTTGCCCTTAGAAAGTTTTATATCCGACcaatatttctttt
ctattttcggAAATCAGCTAATCTTTTCTATTTTCGGAAATCAGCTAACC
CTTATGAAACAGCTCTCAGaactgaaaaatccttcttgaaACCCGTATAT
TTTCCGACACCCCTCCCCATACAGTAGGAGAGAAACGGCTCCAGTCTATT
ATTATAAACTTCTTGTAAGTTTTTGGTGGTTTTAAAAACCGGCCCTCAGA
CGATACTTCCGCCCAGaatcaaatctttcttttgtctttttttaggaatc
tctgaagaaaatgaaagcaataTCAGCTTTCCAAAGCGCGTTTAACAAGG
ATTGA Coding sequence (CDS) from alignment at sc0000372_pilon:87775..92429+ >XLOC_009456 ID=XLOC_009456|Name=XLOC_009456|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000372_pilon:87775..92429+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCACAAGCAATCATGCGTAAGGAAAGAATGGAGGATATTTATGA
CATCAAAGAAGAACTTGGAAGATGGCACCACAAGCAATCATGCGTAAGGA
AAGAATGGAGGATATTTATGACATCAAAGAAGAACTTGGAAGGGGTCATT
TCGCTGTGGTTAAGAAGTGCGTTTGCAAATCTTCTAACGACGACGTTGCT
GGCAAGTTtatcaaagtgaaaaaaacacgTGCTAGTCGGCAAGGAGCTGA
ACGCGCCATTATTGAAAGAGAGGCTGAAATACTTCAAATGATAAATTGTG
ATAAAGTGATGAAACTTTATGATGTTTTTGATCTTGGAAGTGAAATCGTT
CTGGTCATGGAGTTGGGTCATTTCGCTGTGGTTAAGAAGTGCGTTTGCAA
ATCTTCTAACGACGACGTTGCTGGCAAGTTtatcaaagtgaaaaaaacac
gTGCTAGTCGGCAAGGAGCTGAACGCGCCATTATTGAAAGAGAGGCTGAA
ATACTTCAAATGATAAATTGTGATAAAGTGATGAAACTTTATGATGTTTT
TGATCTTGGAAGTGAAATCGTTCTGGTCATGGAGTTATTAACTGGTGGTG
AACTATTCGATAAACTTTGTGAAGAAGACTATTTGACAGAAGAACAAGCA
TGTGATTACACTAAACAAGTTGTTCAAGGGATGGCCTATCTTCACTCAAA
GAATATCATGCATCTCGATATAAAGATTAACTGGTGGTGAACTATTCGAT
AAACTTTGTGAAGAAGACTATTTGACAGAAGAACAAGCATGTGATTACAC
TAAACAAGTTGTTCAAGGGATGGCCTATCTTCACTCAAAGAATATCATGC
ATCTCGATATAAAGcctgaaaacaTTGTTCTAAAGTCACCAGATTCGACG
GAGATCAAGTTAGTGGATTTCGGTTTGGCACAATTATGGTCGCCTgataa
agaaattaaagaaatgaTGGGAACAGCAGAATTTGTAGCTCCAGAAATTG
TCAATTACGAAAAGATTGGACTTTGCACTGATATGTGcctgaaaacaTTG
TTCTAAAGTCACCAGATTCGACGGAGATCAAGTTAGTGGATTTCGGTTTG
GCACAATTATGGTCGCCTgataaagaaattaaagaaatgaTGGGAACAGC
AGAATTTGTAGCTCCAGAAATTGTCAATTACGAAAAGATTGGACTTTGCA
CTGATATGTGGGCTGTTGGTGTATTGGCGTACATTCTGGCTGTTGGTGTA
TTGGCGTACATTCTGTTGAGTGGAGAATCACCCTTCCTCGGTGACGACAA
TCAAGAGACGTTTCAAAACATCGCAAAAGCTGATTATGaatttgatgaag
aaatttttgaagataTCTCCGAAGATGCTATCGATTTTGTGAAAGGTCTG
CTCATCAAAAATCCTGGGTTGAGTGGAGAATCACCCTTCCTCGGTGACGA
CAATCAAGAGACGTTTCAAAACATCGCAAAAGCTGATTATGaatttgatg
aagaaatttttgaagataTCTCCGAAGATGCTATCGATTTTGTGAAAGGT
CTGCTCATCAAAAATCCTGGAAAACGAACAACAGCTCAAGACTGCTTATC
GCATGAATGGATAAAACCTAAGAAAACGAACAACAGCTCAAGACTGCTTA
TCGCATGAATGGATAAAACCTAAGACGAATAAATTCCAAATGGTTCGAGT
CATCATCAAAACAACACGATTGAAAGCTTTCGTTGCAAGACGAAAGTGGC
AGACGAATAAATTCCAAATGGTTCGAGTCATCATCAAAACAACACGATTG
AAAGCTTTCGTTGCAAGACGAAAGTGGCAGgaatctctgaagaaaatgaa
agcaataTCAGCTTTCCAAAGCGCGTTTAACAAGGATTGAgaatctctga
agaaaatgaaagcaataTCAGCTTTCCAAAGCGCGTTTAACAAGGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:87775..92429 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 916-975:4596 |
| Aaloc | 838-915:4159 |
| Aaloc | 787-837:3791 |
| Aaloc | 634-783:3095 |
| Aaloc | 607-630:2648 |
| Aaloc | 433-603:2099 |
| Aaloc | 295-432:999 |
| Aaloc | 73-291:391 |
| Aaloc | 1-69:1 |
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