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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:220107..221915+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009448 ID=XLOC_009448|Name=XLOC_009448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1809bp|location=Sequence derived from alignment at sc0000372_pilon:220107..221915+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATATTCGGTGACATTTCTAACACTCTGGCTGTACATCAAAGAAAT
GATCAACACAGATCAACCAAAGCTATTCTACAGTCTAGTAGCTTCCTCGT
ACCTGATTGCAGCTGTTATCTTATCAGTCTTCATTGGACGGTGGGTCGAC
CGCACGCGTAAAGTACGTCAAATCTTCCTAATCTGCAACACCTTAGTTAT
CATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTGGTTT
TCGGCCGATTGGTGTCTGGTGCTGATGGGCCACTCAGGTCGGTGATTTCT
GGAGAAATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAAATTCTC
TTCGATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGAGTTA
ATTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGTGACT
TATGTGAACATTCCTGGTGTTTATATGGCACTGTTTTTCTTTATCACTCA
GGTAATTGTcatattataaaaaagaattcatCTACCTTACCAATACCTTG
GTATTGCAAATCTTTCTATCAACTAtaaaaaagcgaaaaatgaagaaata
accattttttcccaaaaatactTTGTTCGAAATTGGACTCGTATTAGGAT
TTTAGTCTTAAAGTCTACTTTAATGTACTATAGATCCTGAATTAAAGTAG
TTTTTATTTAATGATCACTGACTGTCTTTTTACAGATATGTGTTTTCTTC
ATGGTTCATGATCTCTCACGTGAGTACGACCTCAAAGCTGACGCCATCCT
TAAACCAATTTTACCAGGAGATATCAAACCACTACCAGTTACAACAAGCt
ttttttATGCTAAATCCAACGCTAATACCCAATCACAATCAGATCGGTTC
ACAAAATCAGTTCAGATTCCAGTCAAACCAAAAGAAACAACCATCAACTT
TTACGATGACACTTTGATTGAAACATCACATGACAATCAACAAGAACGAC
GTAACAAATTCAAAATGCAACGACTCGAAATGTCTGGTATGTTTATAAGA
CCCTTTGCATTCCCAAAGTTAGCATCCAATCAAGTTGTTCCAGTAATCAC
TGAAGATTCATCCCTAACATCCAGCTCCTCATCAAACTACAGCTCTACCT
CCTCCTCATCATCGACATCCAGTGCTGAACAATCCAAAGCTGACCATATC
CTCTGTACCATCCTAACCAATGCAGATTCCCTCTTAATCCTCGCGCTCAC
CTTCATTCTCTGGTACTGGATGGTTGCATTTGATATGTGGTTGCCAATTA
TGGTGGTCGATGTTATGGAGATGAGCATTACAGAACTCAATGGCATTGTC
TTCGGTTTCGGTTGCATCTCAGCTGTTATTCTTGGTATAATGTCTTTAAA
ATCATTCTCTGATCGAATGTTGTACAATCTCTCAATCATATGTATGATCT
CTTTAGCTATAATGGAGCTCATCTTCATCTACATGCGATTCCAACATTCC
CAAATGTATGTCAATATTGTCTTATGGATCATTTGGGGCACCTTATTTGC
CATTGTGGTTATTATGGATGAAGTATTCCTGGTTGGTGTTATGGCAAAGA
TGACCAGCTCTAAAGTACAAACATTCTCTGAGAGCCTTCGACTCTCAATG
TCACGCTTCGGAGCTTTATTAgctttgctgacatcagcagcTTTGTTTGA
ATGGATTGAATATGTATGTGGGGTTGGAGTTATTGTATCGTTACTGACTT
TAGTAATTTTGATTAAACGGAGAAAATCATTGAGAGCTCCCGTGATTTGT
ATTAAGTAA Coding sequence (CDS) from alignment at sc0000372_pilon:220107..221915+ >XLOC_009448 ID=XLOC_009448|Name=XLOC_009448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3150bp|location=Sequence derived from alignment at sc0000372_pilon:220107..221915+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATATTCGGTGACATTTCTAACACTCTGGCTGTACATCAAAGAAAT
GATCAACACAGATCAACCAAAGCTATTCTACAGTCTAGTAGCTTCCTCGT
ACCTGATTGCAGCTGTTATCTTATCAGTCTTCATTGGACGGTGGGTCGAC
CGCACGCGTAAAGTACGTCAAATCTTCCTAATCTGCAACACCTTAGTTAT
CATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTGGTTT
TCGGCCGATTGGTGTCTGGTGCTGATGGGCCACTCAGGTCGGTGATTTCT
GGAGAAATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAAATTCTC
TTCGATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGAGTTA
ATTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGTGACT
TATGTGAACATTCCTGGTGTTTATATGGCACTGTTTTTCTTTATCACTCA
GATGGAATATTCGGTGACATTTCTAACACTCTGGCTGTACATCAAAGAAA
TGATCAACACAGATCAACCAAAGCTATTCTACAGTCTAGTAGCTTCCTCG
TACCTGATTGCAGCTGTTATCTTATCAGTCTTCATTGGACGGTGGGTCGA
CCGCACGCGTAAAGTACGTCAAATCTTCCTAATCTGCAACACCTTAGTTA
TCATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTGGTT
TTCGGCCGATTGGTGTCTGGTGCTGATGGGCCACTCAGGTCGGTGATTTC
TGGAGAAATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAAATTCT
CTTCGATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGAGTT
AATTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGTGAC
TTATGTGAACATTCCTGGTGTTTATATGGCACTGTTTTTCTTTATCACTC
AGATATGTGTTTTCTTCATGGTTCATGATCTCTCACGTGAGTACGACCTC
AAAGCTGACGCCATCCTTAAACCAATTTTACCAGGAGATATCAAACCACT
ACCAGTTACAACAAGCtttttttATGCTAAATCCAACGCTAATACCCAAT
CACAATCAGATCGGTTCACAAAATCAGTTCAGATTCCAGTCAAACCAAAA
GAAACAACCATCAACTTTTACGATGACACTTTGATTGAAACATCACATGA
CAATCAACAAGAACGACGTAACAAATTCAAAATGCAACGACTCGAAATGT
CTGGTATGTTTATAAGACCCTTTGCATTCCCAAAGTTAGCATCCAATCAA
GTTGTTCCAGTAATCACTGAAGATTCATCCCTAACATCCAGCTCCTCATC
AAACTACAGCTCTACCTCCTCCTCATCATCGACATCCAGTGCTGAACAAT
CCAAAGCTGACCATATCCTCTGTACCATCCTAACCAATGCAGATTCCCTC
TTAATCCTCGCGCTCACCTTCATTCTCTGGTACTGGATGGTTGCATTTGA
TATGTGGTTGCCAATTATGGTGGTCGATGTTATGGAGATGAGCATTACAG
AACTCAATGGCATTGTCTTCGGTTTCGGTTGCATCTCAGCTGTTATTCTT
GGTATAATGTCTTTAAAATCATTCTCTGATCGAATGTTGTACAATCTCTC
AATCATATGTATGATCTCTTTAGCTATAATGGAGCTCATCTTCATCTACA
TGCGATTCCAACATTCCCAAATGTATGTCAATATTGTCTTATGGATCATT
TGGGGCACCTTATTTGCCATTGTGGTTATTATGGATGAAGTATTCCTGGT
TGGTGTTATGGCAAAGATGACCAGCTCTAAAGTACAAACATTCTCTGAGA
GCCTTCGACTCTCAATGTCACGCTTCGGAGCTTTATTAgctttgctgaca
tcagcagcTTTGTTTGAATGGATTGAATATGTATGTGGGGTTGGAGTTAT
TGTATCGTTACTGACTTTAGTAATTTTGATTAAACGGAGAAAATCATTGA
GAGCTCCCGTGATTTGTATTAAGTAAATATGTGTTTTCTTCATGGTTCAT
GATCTCTCACGTGAGTACGACCTCAAAGCTGACGCCATCCTTAAACCAAT
TTTACCAGGAGATATCAAACCACTACCAGTTACAACAAGCtttttttATG
CTAAATCCAACGCTAATACCCAATCACAATCAGATCGGTTCACAAAATCA
GTTCAGATTCCAGTCAAACCAAAAGAAACAACCATCAACTTTTACGATGA
CACTTTGATTGAAACATCACATGACAATCAACAAGAACGACGTAACAAAT
TCAAAATGCAACGACTCGAAATGTCTGGTATGTTTATAAGACCCTTTGCA
TTCCCAAAGTTAGCATCCAATCAAGTTGTTCCAGTAATCACTGAAGATTC
ATCCCTAACATCCAGCTCCTCATCAAACTACAGCTCTACCTCCTCCTCAT
CATCGACATCCAGTGCTGAACAATCCAAAGCTGACCATATCCTCTGTACC
ATCCTAACCAATGCAGATTCCCTCTTAATCCTCGCGCTCACCTTCATTCT
CTGGTACTGGATGGTTGCATTTGATATGTGGTTGCCAATTATGGTGGTCG
ATGTTATGGAGATGAGCATTACAGAACTCAATGGCATTGTCTTCGGTTTC
GGTTGCATCTCAGCTGTTATTCTTGGTATAATGTCTTTAAAATCATTCTC
TGATCGAATGTTGTACAATCTCTCAATCATATGTATGATCTCTTTAGCTA
TAATGGAGCTCATCTTCATCTACATGCGATTCCAACATTCCCAAATGTAT
GTCAATATTGTCTTATGGATCATTTGGGGCACCTTATTTGCCATTGTGGT
TATTATGGATGAAGTATTCCTGGTTGGTGTTATGGCAAAGATGACCAGCT
CTAAAGTACAAACATTCTCTGAGAGCCTTCGACTCTCAATGTCACGCTTC
GGAGCTTTATTAgctttgctgacatcagcagcTTTGTTTGAATGGATTGA
ATATGTATGTGGGGTTGGAGTTATTGTATCGTTACTGACTTTAGTAATTT
TGATTAAACGGAGAAAATCATTGAGAGCTCCCGTGATTTGTATTAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:220107..221915 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-1575:736 |
| Aaloc | 1-501:1 |
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