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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000372_pilon:124077..129717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009439 ID=XLOC_009439|Name=XLOC_009439|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5641bp|location=Sequence derived from alignment at sc0000372_pilon:124077..129717- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTTGATATAGG
TAAGATTACTTAACTATGGTTTTATTATTTGATTTTAGATCTAAAAAAAG
TTTTTGAAAAGCACATGGTTCGGGTTCGAAGCACGTGGCAACGTGGCGCC
ATTTTTTGGATACCAATATTTTATACTTTACCTTTTTCTAGATTCCCCTT
CAATCAAAAGAAAAAGGAACAGCTCTAGCAGATCAAAAAGAGATATATTG
GAAAGAACCCCTGGGTAGGAAACTAATTTTATGATGTTTGTAGTGCTATC
TCTGTTTCTATTTATTTTTAGGCATTTTTTGACTTGTATAGAGGGGTCCC
CCAGCGGTTATGTGTGAATTCATGAATGAGCATTTTCAATTGCGTGAATG
CGTGATAATTGAATAAAAGTGCGTGAATTTGTGACTTGAAAAAACTTACA
TGAACGTGAAAAAACACTTTTTGATTGCGGGAATGCGTGAATACGTGAAT
TTTCCCTTTTTTCCACCGATTATGTGCAGTTCTCCCGGTTTTCTAATGTT
TCCCCAATTTCTTTCCGAAAATGTTCCGATTGTCTGAGAAATAGGGTGGT
TATTGCGTGAAACTCAAGGAAAATTTGTGTGAATGCTTGAATTTCGAAAA
AAATTGTGTGATTGTGTGAATTGAGGTTCCGCTGGGGGCCTCTATTATAC
AGTTGACAGTTCTAATGCTGCCTTGCTTTTTCTTGCATTTAACATCTGTC
TTTAATTATTTTTTAGGGGAGGAAATCGTCAAACTCATAACATCTTGGAA
AAGAATAGGTATGAATGATTTGCCTTGTAATAAACTCAATCTAAATTAAC
TCTGCTGAATTTACTGAATCAATCATTGAGCACTAAGGATATTTTACATC
TGAATTTGGGGTTAGTCTAAAAATCAGGGTAGCTACCGTGAGAGGTCCTA
AAGCCGACAGCCCAGCCTAATTCCGACCCCCCAAATAACTGTTATGAAAA
AAAATTCTATGTTTACAAACATTCCCTCTCCAAGTTGAACGATAAACTAT
TGCTAGAACTCTCGAAACAAAACATCTAACAAGATAGCTGTAATGTCAAG
ATGTCAATTAATGTAATTAAAATGTGCGAGTTGTAAAAATAATTACCTTT
TATTATGGATCAGTTGCTCATGTTTAAAACGATAACAGTTTTGTAATAAA
AGTGACTTGTGCGGGAAAAATACGAAACAACTTGGACTGGTTTCCATCAT
AAAACAAACAGACTAAATTGTAAAAATGGCGCGAAGTTGAAAAAAGGGCG
GATGCGGTAGCACTAATTTGAATAACAAACATCGAATTAATGAGGCAGCA
ACTATCAACGCCCTCTTTACCACCTATAAGTCCGGATGTTTATTTACGGA
AAGCTCTTCATTTAAGTGTACTCTTTGACGACATATATTATCTTTACTAG
AATAGGAGCAAGGTGTCATGTAATACATAATAATTGTAATATACGCCGTG
TATTTGTATTCTTATCATGTAATATATAATATAATGTAATATACGTCGTC
TATATGTATCCTTACACAAAGTCTTTACCCTGCAATCAAGCCAAGTGCCA
GTGTAAAGTAATAACCAGGCTTGATTACGCAACGTTTCAAAATGAGCACG
CTCGTACACAGACCTCTTTTATATTTTCGTGTGCTTTGGAAAATCAAAAC
ATCTCATTACTTTTTATGATGCTGTTACTACTGTTGTCATTTATGACGTT
GTGCATATTGCAATAAAAAAATATGTTTTGTTATAAGAAGCAATTATTGT
TATTTGGTTCAATGTATCAAATATCTCAGTTTAGTTGACACTTTGGTATC
TTCGTTGCGTCACAGCGAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTG
AAAGACCCCATCGGCTTTAGGCTGGGCTGTCGGCTTTAGGACCTCTCACG
GTAATAATTTAGCTAGCCAATTGGGCTAGGCAGTTGGGTGTTTAAGATAA
AAACGGCAATTATTGCTCTTTTCGGTAATTTTTTCAATGATGAAATGCTG
AATCAGCAGAAAAGTAAAAAAGTAAATGAAGATTGTCTTTTTTCGGCAAT
TATTGCTGTTTTTGGAAAGAAAAGTTGATTTTATAATTGAACACATAGTA
GGGCCAAAAAAAAAAGTAGTTTTGTTTCCGGAAATGCGGGTGACGAAAAA
AAATCTCACCCGGGCGGCCGGAAAATATTTTTTTTTTTCAATTTTCCTAG
AAAAACTCTAATTGACGTGTACGAAAAAATAATCCAGGTTCGATGTCTCT
TTACTTGAAAAAACAAAATTTTAAGAAGAAGCTGTACTCTAAGGTAATTC
TATTCACAACAACATAAAACAGGAAAGTAGAAAACATTTGTGACAGAAGA
TTTTCTTTTTCAAAACACAAGTGACATACGTAAATCTTTGAATACAATCG
TTAAATGGATCGTAAAATAGTAAAATGAAGAATAAACTCTTTATAAATCT
TTGAATAAAATCATTAAATGGATCGTAAAATGGTAAAATGGAAAATAAAC
TCTTTATGTATCTTTTTTATTGCGACGAGCTTCTATTTGCGGCCGGGTGA
GATATATTTTTTCCAAAAAAAAGTTCACCCGGCCGATTTCCGGAAACAAG
ACTACTTTTTTTTTGGCCTAGTAGATAGCTTAAAAAGGTTAAAAAGACTT
TCTTAAATTTTTGATGATGGATTGTAGATTAACCCTTTTCATTTAGAATT
GACTAGACGGTTCCCGTCGTCACAAACGCCGGTTTAGCTTGCGCATCAAA
AGCCCTTAGGATGACAAAGATGGTATTGTTGCGATGCTGTCTCTAACTTT
ATCTTGAAGGGGAATTTGAATTACTTTTTCATTGACCACGGGAGTATAAT
GAGAAGTGTTCCTTAAGATGTCTTGTAAATACCTTTTCATGCTTCAATTA
AGTGGAATAAGAGAATGGGATTTGAAATCTTCACCATAAATATATGAGCT
TAGTAAATAATAAACCTTCAATTATGAGAATTCAGGAAGTTTGAAAGCGA
TTTCAATTAAATCGAAAACGGGAACTTATTGAGTTATCGTCAAATTAAGA
GGGTCAATATATTATCAGTGAATAAGATTGGAAAAGATATATAAAAACGT
TGCTATATTTACAAATTTCAGGTTGACATGATGCGCCTTATAACACGAAA
TAATAAATACTTTGATTTCAAAACAATCTTTTATCCACTTCTCGATTGGA
AGACCTCCGTTTTTTACCTGTGCATTGACTACATTATCGGCCCTTTCTTC
CTATTAGGGCCAGTTTATTGGCATTTTTGGGCTCACTTGGTGTAATAAGA
GCCGGTGTAAAAAAGCTAAGATTTTGAAATTTTAAACTAAAAGCGACATT
AATTTTTTAGCATTATTTCTCAATTTAAAGGATTTTAGGTATGATTGGAC
AACGAAAGTTATCCATCGTTTTACTCAATATTTAAAACTTCAGTGAAATA
TTTAATATATTTAAAAATCAGTGATTTTCGATAGAATTTTCAACAGTTTT
CTACTGACTAATTTGAAGCATAAGTAGCCTTTTTTACAAATCTTGGCATT
ATTAACAGCCCTAATTGGCGTAAGCCCAAAATTACGAAAGCCGTCTTTCA
TACTCGAATCAACCCCCTGGCAAAATTTGAGATTAACAGCTCAGCTACCA
TCTTGCGTTACACTCATTTCTCATAAACTCATTTATTATGACATATTGTT
TTAAGAAGTTCCTCCTCTGAGAGTGGGAACTCGCTCAGCCTACACCAAGG
TATTCTCTAGCATCCGTAGGTAGCAAGAATAAAGCCTGGGATGCACGGGG
ACAATGTTGAGTACTTGTTAAAGTCAACAAGGATATCTCACTTCCCGCTT
AAGTGACCACTATAAATCACTAGGAGAGTCTTAACATACATTAAAATAAG
TGCATTAGAATGAGAATAGCTGGCAACTAGCCATTTCCCAAAAGAAATTT
TGCTATAAAGTGCTGAATTGAATATTTTACTGATTTTATTTTGTTTTTTT
TGGAAAATTCTTTCTTAGGAGAGCCGAATTGAAGACCTTCTTCCAAAAAT
TAAAAGAAACTGTACCCATCCTACAAAACCGTCCAAAAGCTTCAAATGTC
AGTGTGCTAACTGAATCAATGAAATATATACAGGTATTACTTTAGGCGTA
CAAACTTTTGCAAGCAGAAACTTTAGCGAATTTTTAATTGATTAATTCAA
GATGAAAGACCCCTAAAAATCTTTGTGAATTGTGGCTAATTTTGTAATTT
CAAAAAATTTTAAATCGGGATTTTTTCAAAAACCCCTGGGGAAGTGAGAG
AAATAATTTGCAAAAGAGGCTGATTTGCAAAATTTTGTCCATACAAAGAT
CTTAGTTCTTCAATTCACAAAAAAAAATCCACATGAAAATTAACTCACTG
AAGGTTTTTGAACCCTACTTTCAGTAATTGAGCCATTACCAGGATTTCTC
AGACAACCTTCATAATATTTCTAAAGCTAGTTGTATAAGTAACTTGAGAG
TTCCGACTAAGATTTAATTTTAACTGATTTTCAGATGCCAAATCGATAAT
CATGGAAAGGTTTTCAAGGCTTCGAGATGTGGCCTCACATTATATTGATT
TTAAACCAAAAAATTAGCAAAGTTGATTTCAAGCAAACACTCAATAGATT
ATTTTAATCAAATTATCAAAAAACTATTTATTATACATGAATTACTTAAA
AAGTTTCGAAAGAGTATCAATGAAGGTTCCTTTATGTGAAATATGTTTAT
GTTCAATAAATATGTTTCATTGTGGGTATTGGCATACTAATGCTGGGCTA
GCACTCTTGTGTGAGCGTTTCCCAAATATTGTTGACTCGACATGTTCGGG
TCTTTCAGTCGAAACAAAACCTTTAAATTCCCAAATTTTCTATTTTAGAC
CAAAATCTTTGAAAATATTCTAAAATTTGACAACATCCTTAAAAAGCTAT
CCACAAAATTTTAGTATTCAGGCCAACACTAAACTAGAAAATAATAGGGT
TCCAATCTTGTTGTGATAGGAACTTTGCTAACCTGGCTTTGCTATGATTA
TCCTATTTTGTTTTAGGAATTAAATGAAATTGACAAACAGCATTCACTCG
AAATCACTCGTTTAAGAAGATGTCGAATGTGTCTTGAAGAGCGAATTAAA
ATGTTAAAAGAAGAAATTGATAAACTACCACCTGAAAGTAGGCCTAAAAT
TATATTCAAAGAAACTCCTATCGAACCTGAAAGGGAAAGTACAGATCATG
CTAACCCTTCTCCTACTACTTCGACTGGAGCGCCTCCTAAAAAGCCGAAA
AAAGAAATGGTGTCTATAGAAATTCAAGCAAATGAGGAAGATATTCGTGA
TGCATTACCTGAATCGTATGCCGATGAAAAAACTTTTGACCAGCCGTTAC
CGGATGTTTTACCGGCTCACGAAACTTTAAAGTGTCAGCTTCACACTGAA
CCCTCTTCTGAAGAAAGGTTGACAAATTTGAAAGATAAATTGATGCGAAA
GCGAGTTTTGGAGTCAATGTTGGATGGCGATGAAGATTCTGAAAATGACG
AAGATGTATTAAAAATTGTCTGCGAAGAATTGAAAATTTGA Coding sequence (CDS) from alignment at sc0000372_pilon:124077..129717- >XLOC_009439 ID=XLOC_009439|Name=XLOC_009439|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1608bp|location=Sequence derived from alignment at sc0000372_pilon:124077..129717- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTTGATATAGA
TGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTTGATATAGAT
TCCCCTTCAATCAAAAGAAAAAGGAACAGCTCTAGCAGATCAAAAAGAGA
TATATTGGAAAGAACCCCTGGATTCCCCTTCAATCAAAAGAAAAAGGAAC
AGCTCTAGCAGATCAAAAAGAGATATATTGGAAAGAACCCCTGGGGGAGG
AAATCGTCAAACTCATAACATCTTGGAAAAGAATAGGGGAGGAAATCGTC
AAACTCATAACATCTTGGAAAAGAATAGGAGAGCCGAATTGAAGACCTTC
TTCCAAAAATTAAAAGAAACTGTACCCATCCTACAAAACCGTCCAAAAGC
TTCAAATGTCAGTGTGCTAACTGAATCAATGAAATATATACAGGAGAGCC
GAATTGAAGACCTTCTTCCAAAAATTAAAAGAAACTGTACCCATCCTACA
AAACCGTCCAAAAGCTTCAAATGTCAGTGTGCTAACTGAATCAATGAAAT
ATATACAGGAATTAAATGAAATTGACAAACAGCATTCACTCGAAATCACT
CGTTTAAGAAGATGTCGAATGTGTCTTGAAGAGCGAATTAAAATGTTAAA
AGAAGAAATTGATAAACTACCACCTGAAAGTAGGCCTAAAATTATATTCA
AAGAAACTCCTATCGAACCTGAAAGGGAAAGTACAGATCATGCTAACCCT
TCTCCTACTACTTCGACTGGAGCGCCTCCTAAAAAGCCGAAAAAAGAAAT
GGTGTCTATAGAAATTCAAGCAAATGAGGAAGATATTCGTGATGCATTAC
CTGAATCGTATGCCGATGAAAAAACTTTTGACCAGCCGTTACCGGATGTT
TTACCGGCTCACGAAACTTTAAAGTGTCAGCTTCACACTGAACCCTCTTC
TGAAGAAAGGTTGACAAATTTGAAAGATAAATTGATGCGAAAGCGAGTTT
TGGAGTCAATGTTGGATGGCGATGAAGATTCTGAAAATGACGAAGATGTA
TTAAAAATTGTCTGCGAAGAATTGAAAATTTGAGAATTAAATGAAATTGA
CAAACAGCATTCACTCGAAATCACTCGTTTAAGAAGATGTCGAATGTGTC
TTGAAGAGCGAATTAAAATGTTAAAAGAAGAAATTGATAAACTACCACCT
GAAAGTAGGCCTAAAATTATATTCAAAGAAACTCCTATCGAACCTGAAAG
GGAAAGTACAGATCATGCTAACCCTTCTCCTACTACTTCGACTGGAGCGC
CTCCTAAAAAGCCGAAAAAAGAAATGGTGTCTATAGAAATTCAAGCAAAT
GAGGAAGATATTCGTGATGCATTACCTGAATCGTATGCCGATGAAAAAAC
TTTTGACCAGCCGTTACCGGATGTTTTACCGGCTCACGAAACTTTAAAGT
GTCAGCTTCACACTGAACCCTCTTCTGAAGAAAGGTTGACAAATTTGAAA
GATAAATTGATGCGAAAGCGAGTTTTGGAGTCAATGTTGGATGGCGATGA
AGATTCTGAAAATGACGAAGATGTATTAAAAATTGTCTGCGAAGAATTGA
AAATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000372_pilon | genome | sc0000372_pilon:124077..129717 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 280-804:526 |
| Aaloc | 166-279:1573 |
| Aaloc | 124-162:4875 |
| Aaloc | 52-120:5449 |
| Aaloc | 1-48:5642 |
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