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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:489950..498540- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009424 ID=XLOC_009424|Name=XLOC_009424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8591bp|location=Sequence derived from alignment at sc0000059_pilon:489950..498540- (Clytia hemisphaerica_ch_hm2_pilon) TCATTTGGAAAAGGCCGTCCGAATATCATCCTCCAATCGCACGTTCGGAA
ATCGTCCATCCAACGTCCGTTGTCCTCCCAAATTTATCGTTTCCGGGATT
CATTCTATCCGGAATTCTCTCCTACCGTATCGTCACAGATACTCCATTTC
GTTCAGATACCGCACCCAGCGTCGTATCGTTTTATCGGTATACACACCAA
ATTGTATACAATCCATCATTTCGTTGTTGATTCTCCCGTTGCAAAACGCC
ACTTCTGCCCCGCCTCGTTCTCATGCGTGGTTCGCCCTCAACTGTGGTCT
GTTGTGGGAACAGCGAATTGAGACGAGTCAGTACGTGACGTGTTTGTAAC
AGTGCGTTCAAACTAAGAACAAAAGAAAATTCTTTGGTCACAAATCTTAT
CAAAATTTGTACAAAATCAAATCAAATTGTCCTCAATCTGATAAAATGAA
TATTCACAAATCTCAGTGAAAATAGAAAATATTGTTTGACAAGCCAAATA
TTCTAAGTCTAGAAAATAGGGCAAAAATATCAAACTTAATAAAATGAAAT
GTTATCTTACCAGCGTGCGACTGCATGAATGCTGTGTATAAAACGTCTCA
AGAACACTACACCACAATTTCAAGGTGACAGTGAAAAGTTATCAATATTG
TTCATCAAACATAAAATCAAAGACAAAAAATGTTGACATCGTCAACTCTC
AACAACCTTATCTCAAAAGTTGCAAAAAAGATTCCGTTCTAAAGTATAAA
AAGAATCTAACGCCTACAAAAAATTAATAGCTTTCTCCATCGTATGGTCA
TTAACTTGATCTCCAAATGAAAGTCATTAAATTTTTATCGAGGCTCTCCC
ATGGAGAGCAACAAGTTCGTAATTACTTTCCCTTGAGAATTTGGGTTTCA
TCGATAATTACGTTTACTCACTCGACACTCCCCACCATGAAACAATCAAA
GTTCGAAAGGGTGTGTCAAAACAACAACAATTTTCTCAATACATAAGTAA
CTCTGACATCGTCAGAACCCAGTTGTCGAACATCACCAAATTGAAATGAA
TGTTGATCGTCACGAAATTGAACGAGTGTCGCAGATCACGAAATTGAACG
AGGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAATTGAAC
GAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAATTGA
ACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAATT
GAACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAA
TTGAACGAGTGTTGTACATCACGAAATTGAACGAGTGTTGCACATCACGA
AATTGAACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGTACATCAC
GAAATTGAACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATC
ACGAAATTGAACGAGTTGATCACCAATGAATCTAAATAAACTCAGCTTCA
GAGAAGTTATCATAGGTTCTCAACATAGAGACTTCATGCATAACGTTGGC
TTTGCTCAGTCAACGATATTGTAACATCACCGATGTCAAATTTGAATGCC
TTGTAACGTCGATGTGAAGCGTCGACGTCATCTTGTAGAAATCACGAACA
CGAGTAGTATCAGTAGTATGTACAGTAATGAAAATAAGTAATACATCACC
TGGAATAGCTGCAACGACGAAATCATCAGTTGCTCCAGTGGAAACGAGAG
TCAGCGAGTGCAGCCATTGTACCGAGCTCTTTCATAATGTCAATCTCATC
AAACGATCTGATGAGAACGAGTGAACGAATGGCGCGTTTGGTGAGTCGAA
ATGCTTGTTCCTGATGGTTTTTGTACTTGACAGTTGCTTGTCTGATGACA
TCATCTTTGCCCTTGTGGACACTGTCAATCATCCCATATTGATAGGTGTT
GTTGATGTTGGATTCGTGCTTGAGAAATAGCACGATATCTCCTTTTGATG
GTTGTCTGTCTGAAGTGAACCACTTCTCCTGTGACAAAAGCTTGGGTACA
TGAGTTGACAGCCAAACTTCAAACCATGCGTCGAAACATTGTTGGTTGGC
ATCCAAGATTTTGTTTGGGTGAATTGTTGTTAGCATCTCTCCTTCAGGGC
TTCGCTCATTGTTTCGTCCTAAGCGAAGTGGGTGAGTAGATCCATCGGCT
CGAAATCTGAAACTTCATTTCTGATCCCAATAGGTTGATTGTTGATGCAA
TTGGCAATCTGAGAGGACAAAGTCTCCCATTGAAGCAATGATAAACGTTC
ATTGGAGATGCTTCGTTCTAATGACTTGTTGATTTCTTGAATTCGTCTTT
CCACTTTCCCATGGAAATTATGGCCACCTACTGGACATGAGTTGAATTCG
ACTTCCACATCTTGATGTAGCTGATTCACAGTATCCTTGAATTTCAGTCT
CATATCTTTGCAACCCTTGAGCAATTGACTTCCTTCGTCACAGTAGAGGG
TTTTTGGAAAGCCTGCATCACTGGCGAAACGAATGAAGGCTTGTAAGAAA
GCAGGTGTAGAATAATCGTCCATGACTTTAATTGAAGTTGACGAGGTAGT
TGAGCAGCAAAATACTACAAGCCAGATTTTGATCGTGGCTCGTTTGTTGT
GTGGAGAGAATGCTTTGTATGGACCCGATAGATCAACTTGACACATGTAA
AACGCAGGAGCAACAGTGAGTCTTGAGCTTGGAATTGGACCCATAGCAAC
TTCGATAGTTTTCTTCTCAAGGTACCTGCATCTAGGACACGATCGTTTGA
TAGCTTTGATGATTGATCTAACTTCCAATATGTAAGCATGTCTGAGTACG
GCTCTCAAAGTTGTTTCTATTCCCCGATGAGAAGCATTCTGGTCATTCCA
GTGTACGTCATTAACAATGGCGTATGCAACAGGTGAGTGTTTATCAACCA
AGGGGACGCAGAAGCTTGTGGATGAGAGATCTTTCATTGCCTTTGTAAAT
CTTCCGGTAACAGTGATGTCATCACATGTTAAGACTCTTCCGGTGTAAAT
GAGAACTCCATCTTTCATCCTTGAAATCTTCTCATACTTTTTCTTTGGCA
GAAAGTGTTGAATCTCTGCCGTGCATTTCTTGAAGTAGTAAGATTTGGCT
TTGTCAGTGTCAGATGTCGATACAACTTTGCACCATGGGTGGGACTTCAG
TTTGGAAGGATTAACTTTACGTGAAAGGATCTTGCGGATGAACTTCATAA
CCATTGTCATTAGCCTGATTACTTTGCTGTATGAGTGTTTGTTTGGATCA
ATGATATACTGTAAAAAATCGAAGTGTTTCTTAACTTCAGAAGGTACTGA
TTGGTTACTCAAGAACGTTGATTCCTGAGGATATGTTTCTTTGTTGGCTT
CTGTTATCTGGGATGCATCAAGCTTCAAGCTGTTGATTGGAGTGACTGGA
AATTCAGATTGATCTTTCGACATCCATTCATATCCGTTAATCCAATCAGA
ATCCATTGATATATCCTCAATTGAGCATCCTCTTCTGGTTCCCAAGTCAG
CAATCATGTTCTTGGATGATACATAGTACCAGTCAGATGGTTGGGAGAAA
CGACGAATCTCAATCACTCTGTCCCTAACCCATTGTTTGAGTGGTTTTTT
ATCATTGCCAATCCAGTGCAGTACAACTTGGCTGTCACAAAGTTTCATAG
ACGACTTATGAAGATCTCCAAGTGATCTCTTTACGACCTCACTGGTGTGA
ATGTTGAGTAGAGCTGCAATCATCTCAGCTCTTGGTTGGGAGGTATGATC
AGGAAGGATTTTTGACCTGGCAAACAGAAGTTGACAGCAGTAATCACCAC
TACGCCTTTTGATCCTTGAATAGATGGCTGAGCAGGCAATACTTGAACTG
GCATCACCTGTGTCAATCGTTTCAATCGATAATGATTCGGCATCCTCAGG
TACAACACATCTCTTGAAGTAAACTGTTTTCATCTCTTGCATCATTTGGA
AGTTGTTTATCCAAGTTGGTCTCAGCTCCTTTGGAATAGCATCATCCCAG
TCAAGCTTGTGGATGACTAAGTCATGAAGGTCTAATTTGAATCCTGCTGA
AATTGGCGTCATCTTTCCAAGAAGGTCGTATATCTCTCCTACCTTGGAGG
CACAATGGCGTTTGGTTAATCGTTCTGGAATTGAATTATCACTGACAGGT
GGTTTCCTCCCACGTTTGCGTTTGGCAAAATTCAATTCTCCAATGTTCAA
CAATATCACATCGTCTTTTGGAAACCATTTGAGTCCAGCAACAACCAGTG
ACTTGCCATCATCAGACAAGTTCTCATTTGGATTCTCACCGGATAAAGTA
ATGCCTTTCAGTTTGTAACCACCACGATTGACGATTAACTCCATTTCATC
AGCTCTTTGACTAGCCATTTCGAGTGAGGCTGCACCACTAATGCAATCAT
CAACGTATATGTCCTTCTTGATGATTCTACTGGTTTCAGGAAATTCATTT
TTCGACATGTCAGCAATCTTTCTAAGCCCATATTCAGCTTGATTCCCACT
TGGCTTCACTCCATAAATAAGTGTTTTGATCACCTTTTCGTCAGGGATTT
TTGTGGGGTCGAGATTCTCATGCCAGATATATCTTTGCAAGCACCAATCT
CTTTGGTCGAGCCGAATGGTATTGTACATTTTGCTGATATCTGAGTGAAT
ACCAACTTGGTGTGTTGACCAACGAATGGCGATCTCCTGCAATTTGTTCA
AACCATTCTTTCCTTTAGCGAGAATATCATTAAGACTGTAGCCTGATGAT
GTAACCATAGATGCATCAAAGACTATACGGCAAGGGGTTGAGATAGATGT
GGGTTTCCACACTGCCCTCCACGGGATAAAATTTTGGACAGGATTGTTTC
TCAGATCAACTTGGACATCAGCAGGGAGATTTTTCACATAATCAACGAAT
CCAAGTTTCTGCAACTTTGCTTCTGATTCTAACACATCCGACTTATCTTG
GGCATTCGTGGGATTGTTAAGCTTTTTTATCTGCTGGCTGTATACTTTCA
AAGCGACCGATTTATTGGGTGCGAGGCGCTTTACTGGATCGAACATTAAC
GGTAGCCTGGCAGTGGTCGTGCACGTATTTGTATCAATCGATACGGATGA
ATTAATTATGGCTTGCTCAGCTTCCTCTTTTATGCTAATAGCCTCAATCG
ATTCATGGGATTTGCAATCTTTGCAATTTCGGCACGTTGTACAACGATAC
GTTATCTGTGAACCTGCGTTCTCGGCAGATTCAAAAGATTTCAGAATGTT
TGATCGATAAGCTGTATGATCAATCAAAGGAGTGGAATTTTGGATAGTTG
GGGATTCCACAATCGAGAGTTCGCGGATACGGGCGAGTTCCGTATAGAAA
GTTGCTGACAGATGAGCATCGAAAGTACGGGAAAATGATTCATGTGGACC
GCCAAGGACACCGGTGGTTCCATCAGAACCTCTGAAAACTGATTTGAATA
TGGATAAACCCGTTGGTGATTGGAATATAAGTTTTGGGAATAGCGAAAGT
AGGAAATGCCGATCATCATATCGACTTTGCCACCGGCAGATTTTGGTAAT
TTTGGGAATATTTTCGCTATTGCGCCCGCTGCATCGAAAAGACTCTTCTC
CGCATCACATAGTGAATATCGCGGAAATTCATCGGTCAGTTTCGGTAAGC
AGAGTCCGGATAACTGCGCATGTTTCCCGGTAGATAACGGTAATTTAATC
CGGTACAAGCCATGATCTGATATTGTTTTTGATCCAGCAAGTCCTCCAAC
GGAAACAGGAACTTTTGACAGCATTGTAGCACTGGAACCAAGACGATTAA
CTGCATCCTCGGTAATCAGGAAATCACTGCAGCCTGAATCGAAGAATATG
TTGAACAGTTCGCTATGAAGCTTGATCTGTTGGAGCATATAGATTCCACG
ATCTTTGATATCTTCCTCTGAATCAGCAACGTTTGATTCTACAAAGTTCT
GCACAGGAACATTCGGTTGCAGGACATTTTTCTCAGCAACTGGCTGATGG
ATTTCAGAGGTAAGGATTGCGCTGCTCGCGTGAAATGATAATTTAATTTC
TCTGGAAAAGGACGGTAAGCTAGGATTTCTCATGCATTTTGCCTTATATC
GTTCCAGTAATTCCTCGTTATCCTTGGAATTTTTATGCTCGTCACAGAGT
AAGACGTGCTTCTTTTTGGGATAAGAATTGTGTGAAGGGTGTGGACATAT
AAATTCAGCTTGACATTCCCCTTTGGCATGTTTCCCTTTGTTCCAGTCAG
CCCCAGGGTAGAGACATTGGAAGCAAAATCCCTTCCTTCGTAACATCGAG
AATCGTTGGGAGGGTGTTTTTTCAGCAAAAGCACGACAGGAAAAGTATTG
GATTACTTTGGATCCAATTGATCCAGTGGAAACATGATCATGTTCCCCAT
CCTTTGCCCCACACAATGAACATTTCTTGCATTCTTGCTTTTCCCCAAAA
ATGCACACGAGCCTCTGTTGCTCAACTTTAAGCTCCTTCTCGAGAAAAAG
TAGAAGTTGGTTCCATAGGGCTTTCTCATTTGCCTCTAACTCACAGGATT
CCTTCAGCCACTGGGTCATACGAGCATTCCCCATTAAACGATAGATTTTT
TCCAAACCTTCCCCGTAAAATAGGTTTTTTTCAATGTTGTGCTTGGAAGC
CAAATTTAAGAGATCCCTCATCAGGCTAATGATCTGACTGATTCCGGCAA
TCAACTTCTCAGGGTCCTTGGTTTTCCCCAGCTGAGAGATATTGTCTAAT
TTGGCAACCTTCCTGGCCAAAAGAAATCTGGTGTCCCCATAAGTTGCTTT
CAATCGTTCCCAGATCTCAGAGATTTTATCAACATGCTTAACCAGAGACA
ATGCTGGCTCTGATAGATGGTTATTAATCAAAAGGTCCGGTAGCATTCTC
TTAGTTGTAGTACGAACATAAAGCTTCTCGAACTCAGTTTGGAAGGTATA
GATGTCCAAAGGTGAATCGTACCCAGAAAATTTGCCAAATTGATATTCAG
CTTCCCCTCCTTGATTAGATCCCTCTTGTTGAGCTCCCTTTGATCCACTT
CTTTCTCCAGGTCCTTCAGAAAGTCAGTCTTCTTAGAAATAATAAAATCA
TATTTCTTACCAAGTTCTTCTACTGCTTTCTTCATTGCACCAGATGCAGC
AGGGTATTTCAGGATTTCTTGGTAGTTCTGGGTCACAGTTTCCAATTTCT
TTGCCGACACCTTCTGGTTATCCTGTAGCTTCAAGAGTTGGTCATCAGTC
AGTTGTGGAATGGTGGACTCACACCATTCGGACTCGAGCTCTGTTGCAAT
CCTGAGGGTTGTGTTGACTTGGAAAAGCTTCGACTTCTCCTGGTGGTTGA
GAATGGTCTTCTGGGTTGCTGCTTCCTTTGATTGAGCTTCCTTGGACATT
TCGATACCAGTTTTGATCTTCTGGATGACGTCATCGAATTCTCGTTTGTA
ATCAGTATTGTACCTGGGAGTGCCAATTAATAATTTTATCTTGGTGTGCT
TGGTCCTAAACTCGGACCTCAATTCCTTATGTGGCGATTATCTCACGTGC
TGGAGTTACATCAAATGACATCTCGTCCACAAAATCTCCAATATCATCTT
TCAGGACTTCCACTTCAACGAATAAGTCCACCGGGTCGATGGGTTGTTTG
CCATCTTCTTGTTTTTCGTCTGCCATAGTTGACGGTTCGGTTAAGGGCAC
ACGTTTGCCTGTGTTATGCAGGGCGCTATAATCGATTCGTTTAGCGGCTG
CTCTTTTGTTCATTTATATCATACGGTCTGCTGTTTGAATGTTGTGGGAA
CAGCGAATTGAGACGAGTCAGTACGTGACGTGTTTGTAACAGTGCGTTCA
AACTAAGAACAAAAGAAAATTCTTTGGTCACAAATCTTATCAAAATTTGT
ACAAAATCAAATCAAATTGTCCTCAATCTGATAAAATGAATATTCACAAA
TCTCAGTGAAAATAGAAAATATTGTTTGACAAGCCAAATATTCTAAGTCT
AGAAAATAGGGCAAAAATATCAAACTTAATAAAATGAAATATTATCTTAC
CAGCGTGCGACTGCATGAATGCTGTGTATAAAACGTCTCAAGAACACTAC
ACCACAATTTCAAGGTGACAGTGAAAAGTTATCAATATTGTTCATCAAAC
ATAAAATCAAAGACAAAAAATGTTGACATCGTCAACTCTCAACAACCTTA
TCTCAAAAGTTGCAAAAAAGATTCCGTTCTAAAGTATAAAAAGAATCTAA
CGCCTACAAAAAATTAATAGCTTTCTCCATCGTATGGTCATTAACTTGAT
CTCCAAATGAAAGTCATTAAATTTTTATCGAGGCTCTCCCATGGAGAGCA
ACAAGTTCGTAATTACTTTCCCTTGAGAATTTGGGTTTCATCGATAATTA
CGTTTACTCACTCGACATGGTCCACCCCGTCACCAATCGTGCCCCGCCCC
CAATCGTGGTCCACCCTCATCCTCAATAGTGGTATACTTTATCAATCGCA
GGTCACCTTCGTTTGAATTGTCTTCCGCCCTCGATTATTAA Coding sequence (CDS) from alignment at sc0000059_pilon:489950..498540- >XLOC_009424 ID=XLOC_009424|Name=XLOC_009424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=758bp|location=Sequence derived from alignment at sc0000059_pilon:489950..498540- (Clytia hemisphaerica_ch_hm2_pilon) TCATTTGGAAAAGGCCGTCCGAATATCATCCTCCAATCGCACGTTCGGAA ATCGTCCATCCAACGTCCGTTGTCCTCCCAAATTTATCGTTTCCGGGATT CATTCTATCCGGAATTCTCTCCTACCGTATCGTCACAGATACTCCATTTC GTTCAGATACCGCACCCAGCGTCGTATCGTTTTATCGGTATACACACCAA ATTGTATACAATCCATCATTTCGTTGTTGATTCTCCCGTTGCAAAACGCC ACTTCTGCCCCGCCTCGTTCTCATGCGTGGTTCGCCCTCAATCATTTGGA AAAGGCCGTCCGAATATCATCCTCCAATCGCACGTTCGGAAATCGTCCAT CCAACGTCCGTTGTCCTCCCAAATTTATCGTTTCCGGGATTCATTCTATC CGGAATTCTCTCCTACCGTATCGTCACAGATACTCCATTTCGTTCAGATA CCGCACCCAGCGTCGTATCGTTTTATCGGTATACACACCAAATTGTATAC AATCCATCATTTCGTTGTTGATTCTCCCGTTGCAAAACGCCACTTCTGCC CCGCCTCGTTCTCATGCGTGGTTCGCCCTCAATCGTGGTCCACCCTCATC CTCAATAGTGGTATACTTTATCAATCGCAGGTCACCTTCGTTTGAATTGT CTTCCGCCCTCGATTATTAATCGTGGTCCACCCTCATCCTCAATAGTGGT ATACTTTATCAATCGCAGGTCACCTTCGTTTGAATTGTCTTCCGCCCTCG ATTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000059_pilon | genome | sc0000059_pilon:489950..498540 - |
Properties
| Property Name | Value |
| Aaloc | 295-381:88 |
| Aaloc | 247-291:8348 |
| Aaloc | 4-246:8592 |
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