XLOC_009424 (mRNA) -

Overview
NameXLOC_009424
Unique NameXLOC_009424
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000059_pilon:489950..498540-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009424 ID=XLOC_009424|Name=XLOC_009424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8591bp|location=Sequence derived from alignment at sc0000059_pilon:489950..498540- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTTGGAAAAGGCCGTCCGAATATCATCCTCCAATCGCACGTTCGGAA ATCGTCCATCCAACGTCCGTTGTCCTCCCAAATTTATCGTTTCCGGGATT CATTCTATCCGGAATTCTCTCCTACCGTATCGTCACAGATACTCCATTTC GTTCAGATACCGCACCCAGCGTCGTATCGTTTTATCGGTATACACACCAA ATTGTATACAATCCATCATTTCGTTGTTGATTCTCCCGTTGCAAAACGCC ACTTCTGCCCCGCCTCGTTCTCATGCGTGGTTCGCCCTCAACTGTGGTCT GTTGTGGGAACAGCGAATTGAGACGAGTCAGTACGTGACGTGTTTGTAAC AGTGCGTTCAAACTAAGAACAAAAGAAAATTCTTTGGTCACAAATCTTAT CAAAATTTGTACAAAATCAAATCAAATTGTCCTCAATCTGATAAAATGAA TATTCACAAATCTCAGTGAAAATAGAAAATATTGTTTGACAAGCCAAATA TTCTAAGTCTAGAAAATAGGGCAAAAATATCAAACTTAATAAAATGAAAT GTTATCTTACCAGCGTGCGACTGCATGAATGCTGTGTATAAAACGTCTCA AGAACACTACACCACAATTTCAAGGTGACAGTGAAAAGTTATCAATATTG TTCATCAAACATAAAATCAAAGACAAAAAATGTTGACATCGTCAACTCTC AACAACCTTATCTCAAAAGTTGCAAAAAAGATTCCGTTCTAAAGTATAAA AAGAATCTAACGCCTACAAAAAATTAATAGCTTTCTCCATCGTATGGTCA TTAACTTGATCTCCAAATGAAAGTCATTAAATTTTTATCGAGGCTCTCCC ATGGAGAGCAACAAGTTCGTAATTACTTTCCCTTGAGAATTTGGGTTTCA TCGATAATTACGTTTACTCACTCGACACTCCCCACCATGAAACAATCAAA GTTCGAAAGGGTGTGTCAAAACAACAACAATTTTCTCAATACATAAGTAA CTCTGACATCGTCAGAACCCAGTTGTCGAACATCACCAAATTGAAATGAA TGTTGATCGTCACGAAATTGAACGAGTGTCGCAGATCACGAAATTGAACG AGGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAATTGAAC GAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAATTGA ACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAATT GAACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATCACGAAA TTGAACGAGTGTTGTACATCACGAAATTGAACGAGTGTTGCACATCACGA AATTGAACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGTACATCAC GAAATTGAACGAGTGTTGCACATCACGAAATTGAACGAGTGTTGCACATC ACGAAATTGAACGAGTTGATCACCAATGAATCTAAATAAACTCAGCTTCA GAGAAGTTATCATAGGTTCTCAACATAGAGACTTCATGCATAACGTTGGC TTTGCTCAGTCAACGATATTGTAACATCACCGATGTCAAATTTGAATGCC TTGTAACGTCGATGTGAAGCGTCGACGTCATCTTGTAGAAATCACGAACA CGAGTAGTATCAGTAGTATGTACAGTAATGAAAATAAGTAATACATCACC TGGAATAGCTGCAACGACGAAATCATCAGTTGCTCCAGTGGAAACGAGAG TCAGCGAGTGCAGCCATTGTACCGAGCTCTTTCATAATGTCAATCTCATC AAACGATCTGATGAGAACGAGTGAACGAATGGCGCGTTTGGTGAGTCGAA ATGCTTGTTCCTGATGGTTTTTGTACTTGACAGTTGCTTGTCTGATGACA TCATCTTTGCCCTTGTGGACACTGTCAATCATCCCATATTGATAGGTGTT GTTGATGTTGGATTCGTGCTTGAGAAATAGCACGATATCTCCTTTTGATG GTTGTCTGTCTGAAGTGAACCACTTCTCCTGTGACAAAAGCTTGGGTACA TGAGTTGACAGCCAAACTTCAAACCATGCGTCGAAACATTGTTGGTTGGC ATCCAAGATTTTGTTTGGGTGAATTGTTGTTAGCATCTCTCCTTCAGGGC TTCGCTCATTGTTTCGTCCTAAGCGAAGTGGGTGAGTAGATCCATCGGCT CGAAATCTGAAACTTCATTTCTGATCCCAATAGGTTGATTGTTGATGCAA TTGGCAATCTGAGAGGACAAAGTCTCCCATTGAAGCAATGATAAACGTTC ATTGGAGATGCTTCGTTCTAATGACTTGTTGATTTCTTGAATTCGTCTTT CCACTTTCCCATGGAAATTATGGCCACCTACTGGACATGAGTTGAATTCG ACTTCCACATCTTGATGTAGCTGATTCACAGTATCCTTGAATTTCAGTCT CATATCTTTGCAACCCTTGAGCAATTGACTTCCTTCGTCACAGTAGAGGG TTTTTGGAAAGCCTGCATCACTGGCGAAACGAATGAAGGCTTGTAAGAAA GCAGGTGTAGAATAATCGTCCATGACTTTAATTGAAGTTGACGAGGTAGT TGAGCAGCAAAATACTACAAGCCAGATTTTGATCGTGGCTCGTTTGTTGT GTGGAGAGAATGCTTTGTATGGACCCGATAGATCAACTTGACACATGTAA AACGCAGGAGCAACAGTGAGTCTTGAGCTTGGAATTGGACCCATAGCAAC TTCGATAGTTTTCTTCTCAAGGTACCTGCATCTAGGACACGATCGTTTGA TAGCTTTGATGATTGATCTAACTTCCAATATGTAAGCATGTCTGAGTACG GCTCTCAAAGTTGTTTCTATTCCCCGATGAGAAGCATTCTGGTCATTCCA GTGTACGTCATTAACAATGGCGTATGCAACAGGTGAGTGTTTATCAACCA AGGGGACGCAGAAGCTTGTGGATGAGAGATCTTTCATTGCCTTTGTAAAT CTTCCGGTAACAGTGATGTCATCACATGTTAAGACTCTTCCGGTGTAAAT GAGAACTCCATCTTTCATCCTTGAAATCTTCTCATACTTTTTCTTTGGCA GAAAGTGTTGAATCTCTGCCGTGCATTTCTTGAAGTAGTAAGATTTGGCT TTGTCAGTGTCAGATGTCGATACAACTTTGCACCATGGGTGGGACTTCAG TTTGGAAGGATTAACTTTACGTGAAAGGATCTTGCGGATGAACTTCATAA CCATTGTCATTAGCCTGATTACTTTGCTGTATGAGTGTTTGTTTGGATCA ATGATATACTGTAAAAAATCGAAGTGTTTCTTAACTTCAGAAGGTACTGA TTGGTTACTCAAGAACGTTGATTCCTGAGGATATGTTTCTTTGTTGGCTT CTGTTATCTGGGATGCATCAAGCTTCAAGCTGTTGATTGGAGTGACTGGA AATTCAGATTGATCTTTCGACATCCATTCATATCCGTTAATCCAATCAGA ATCCATTGATATATCCTCAATTGAGCATCCTCTTCTGGTTCCCAAGTCAG CAATCATGTTCTTGGATGATACATAGTACCAGTCAGATGGTTGGGAGAAA CGACGAATCTCAATCACTCTGTCCCTAACCCATTGTTTGAGTGGTTTTTT ATCATTGCCAATCCAGTGCAGTACAACTTGGCTGTCACAAAGTTTCATAG ACGACTTATGAAGATCTCCAAGTGATCTCTTTACGACCTCACTGGTGTGA ATGTTGAGTAGAGCTGCAATCATCTCAGCTCTTGGTTGGGAGGTATGATC AGGAAGGATTTTTGACCTGGCAAACAGAAGTTGACAGCAGTAATCACCAC TACGCCTTTTGATCCTTGAATAGATGGCTGAGCAGGCAATACTTGAACTG GCATCACCTGTGTCAATCGTTTCAATCGATAATGATTCGGCATCCTCAGG TACAACACATCTCTTGAAGTAAACTGTTTTCATCTCTTGCATCATTTGGA AGTTGTTTATCCAAGTTGGTCTCAGCTCCTTTGGAATAGCATCATCCCAG TCAAGCTTGTGGATGACTAAGTCATGAAGGTCTAATTTGAATCCTGCTGA AATTGGCGTCATCTTTCCAAGAAGGTCGTATATCTCTCCTACCTTGGAGG CACAATGGCGTTTGGTTAATCGTTCTGGAATTGAATTATCACTGACAGGT GGTTTCCTCCCACGTTTGCGTTTGGCAAAATTCAATTCTCCAATGTTCAA CAATATCACATCGTCTTTTGGAAACCATTTGAGTCCAGCAACAACCAGTG ACTTGCCATCATCAGACAAGTTCTCATTTGGATTCTCACCGGATAAAGTA ATGCCTTTCAGTTTGTAACCACCACGATTGACGATTAACTCCATTTCATC AGCTCTTTGACTAGCCATTTCGAGTGAGGCTGCACCACTAATGCAATCAT CAACGTATATGTCCTTCTTGATGATTCTACTGGTTTCAGGAAATTCATTT TTCGACATGTCAGCAATCTTTCTAAGCCCATATTCAGCTTGATTCCCACT TGGCTTCACTCCATAAATAAGTGTTTTGATCACCTTTTCGTCAGGGATTT TTGTGGGGTCGAGATTCTCATGCCAGATATATCTTTGCAAGCACCAATCT CTTTGGTCGAGCCGAATGGTATTGTACATTTTGCTGATATCTGAGTGAAT ACCAACTTGGTGTGTTGACCAACGAATGGCGATCTCCTGCAATTTGTTCA AACCATTCTTTCCTTTAGCGAGAATATCATTAAGACTGTAGCCTGATGAT GTAACCATAGATGCATCAAAGACTATACGGCAAGGGGTTGAGATAGATGT GGGTTTCCACACTGCCCTCCACGGGATAAAATTTTGGACAGGATTGTTTC TCAGATCAACTTGGACATCAGCAGGGAGATTTTTCACATAATCAACGAAT CCAAGTTTCTGCAACTTTGCTTCTGATTCTAACACATCCGACTTATCTTG GGCATTCGTGGGATTGTTAAGCTTTTTTATCTGCTGGCTGTATACTTTCA AAGCGACCGATTTATTGGGTGCGAGGCGCTTTACTGGATCGAACATTAAC GGTAGCCTGGCAGTGGTCGTGCACGTATTTGTATCAATCGATACGGATGA ATTAATTATGGCTTGCTCAGCTTCCTCTTTTATGCTAATAGCCTCAATCG ATTCATGGGATTTGCAATCTTTGCAATTTCGGCACGTTGTACAACGATAC GTTATCTGTGAACCTGCGTTCTCGGCAGATTCAAAAGATTTCAGAATGTT TGATCGATAAGCTGTATGATCAATCAAAGGAGTGGAATTTTGGATAGTTG GGGATTCCACAATCGAGAGTTCGCGGATACGGGCGAGTTCCGTATAGAAA GTTGCTGACAGATGAGCATCGAAAGTACGGGAAAATGATTCATGTGGACC GCCAAGGACACCGGTGGTTCCATCAGAACCTCTGAAAACTGATTTGAATA TGGATAAACCCGTTGGTGATTGGAATATAAGTTTTGGGAATAGCGAAAGT AGGAAATGCCGATCATCATATCGACTTTGCCACCGGCAGATTTTGGTAAT TTTGGGAATATTTTCGCTATTGCGCCCGCTGCATCGAAAAGACTCTTCTC CGCATCACATAGTGAATATCGCGGAAATTCATCGGTCAGTTTCGGTAAGC AGAGTCCGGATAACTGCGCATGTTTCCCGGTAGATAACGGTAATTTAATC CGGTACAAGCCATGATCTGATATTGTTTTTGATCCAGCAAGTCCTCCAAC GGAAACAGGAACTTTTGACAGCATTGTAGCACTGGAACCAAGACGATTAA CTGCATCCTCGGTAATCAGGAAATCACTGCAGCCTGAATCGAAGAATATG TTGAACAGTTCGCTATGAAGCTTGATCTGTTGGAGCATATAGATTCCACG ATCTTTGATATCTTCCTCTGAATCAGCAACGTTTGATTCTACAAAGTTCT GCACAGGAACATTCGGTTGCAGGACATTTTTCTCAGCAACTGGCTGATGG ATTTCAGAGGTAAGGATTGCGCTGCTCGCGTGAAATGATAATTTAATTTC TCTGGAAAAGGACGGTAAGCTAGGATTTCTCATGCATTTTGCCTTATATC GTTCCAGTAATTCCTCGTTATCCTTGGAATTTTTATGCTCGTCACAGAGT AAGACGTGCTTCTTTTTGGGATAAGAATTGTGTGAAGGGTGTGGACATAT AAATTCAGCTTGACATTCCCCTTTGGCATGTTTCCCTTTGTTCCAGTCAG CCCCAGGGTAGAGACATTGGAAGCAAAATCCCTTCCTTCGTAACATCGAG AATCGTTGGGAGGGTGTTTTTTCAGCAAAAGCACGACAGGAAAAGTATTG GATTACTTTGGATCCAATTGATCCAGTGGAAACATGATCATGTTCCCCAT CCTTTGCCCCACACAATGAACATTTCTTGCATTCTTGCTTTTCCCCAAAA ATGCACACGAGCCTCTGTTGCTCAACTTTAAGCTCCTTCTCGAGAAAAAG TAGAAGTTGGTTCCATAGGGCTTTCTCATTTGCCTCTAACTCACAGGATT CCTTCAGCCACTGGGTCATACGAGCATTCCCCATTAAACGATAGATTTTT TCCAAACCTTCCCCGTAAAATAGGTTTTTTTCAATGTTGTGCTTGGAAGC CAAATTTAAGAGATCCCTCATCAGGCTAATGATCTGACTGATTCCGGCAA TCAACTTCTCAGGGTCCTTGGTTTTCCCCAGCTGAGAGATATTGTCTAAT TTGGCAACCTTCCTGGCCAAAAGAAATCTGGTGTCCCCATAAGTTGCTTT CAATCGTTCCCAGATCTCAGAGATTTTATCAACATGCTTAACCAGAGACA ATGCTGGCTCTGATAGATGGTTATTAATCAAAAGGTCCGGTAGCATTCTC TTAGTTGTAGTACGAACATAAAGCTTCTCGAACTCAGTTTGGAAGGTATA GATGTCCAAAGGTGAATCGTACCCAGAAAATTTGCCAAATTGATATTCAG CTTCCCCTCCTTGATTAGATCCCTCTTGTTGAGCTCCCTTTGATCCACTT CTTTCTCCAGGTCCTTCAGAAAGTCAGTCTTCTTAGAAATAATAAAATCA TATTTCTTACCAAGTTCTTCTACTGCTTTCTTCATTGCACCAGATGCAGC AGGGTATTTCAGGATTTCTTGGTAGTTCTGGGTCACAGTTTCCAATTTCT TTGCCGACACCTTCTGGTTATCCTGTAGCTTCAAGAGTTGGTCATCAGTC AGTTGTGGAATGGTGGACTCACACCATTCGGACTCGAGCTCTGTTGCAAT CCTGAGGGTTGTGTTGACTTGGAAAAGCTTCGACTTCTCCTGGTGGTTGA GAATGGTCTTCTGGGTTGCTGCTTCCTTTGATTGAGCTTCCTTGGACATT TCGATACCAGTTTTGATCTTCTGGATGACGTCATCGAATTCTCGTTTGTA ATCAGTATTGTACCTGGGAGTGCCAATTAATAATTTTATCTTGGTGTGCT TGGTCCTAAACTCGGACCTCAATTCCTTATGTGGCGATTATCTCACGTGC TGGAGTTACATCAAATGACATCTCGTCCACAAAATCTCCAATATCATCTT TCAGGACTTCCACTTCAACGAATAAGTCCACCGGGTCGATGGGTTGTTTG CCATCTTCTTGTTTTTCGTCTGCCATAGTTGACGGTTCGGTTAAGGGCAC ACGTTTGCCTGTGTTATGCAGGGCGCTATAATCGATTCGTTTAGCGGCTG CTCTTTTGTTCATTTATATCATACGGTCTGCTGTTTGAATGTTGTGGGAA CAGCGAATTGAGACGAGTCAGTACGTGACGTGTTTGTAACAGTGCGTTCA AACTAAGAACAAAAGAAAATTCTTTGGTCACAAATCTTATCAAAATTTGT ACAAAATCAAATCAAATTGTCCTCAATCTGATAAAATGAATATTCACAAA TCTCAGTGAAAATAGAAAATATTGTTTGACAAGCCAAATATTCTAAGTCT AGAAAATAGGGCAAAAATATCAAACTTAATAAAATGAAATATTATCTTAC CAGCGTGCGACTGCATGAATGCTGTGTATAAAACGTCTCAAGAACACTAC ACCACAATTTCAAGGTGACAGTGAAAAGTTATCAATATTGTTCATCAAAC ATAAAATCAAAGACAAAAAATGTTGACATCGTCAACTCTCAACAACCTTA TCTCAAAAGTTGCAAAAAAGATTCCGTTCTAAAGTATAAAAAGAATCTAA CGCCTACAAAAAATTAATAGCTTTCTCCATCGTATGGTCATTAACTTGAT CTCCAAATGAAAGTCATTAAATTTTTATCGAGGCTCTCCCATGGAGAGCA ACAAGTTCGTAATTACTTTCCCTTGAGAATTTGGGTTTCATCGATAATTA CGTTTACTCACTCGACATGGTCCACCCCGTCACCAATCGTGCCCCGCCCC CAATCGTGGTCCACCCTCATCCTCAATAGTGGTATACTTTATCAATCGCA GGTCACCTTCGTTTGAATTGTCTTCCGCCCTCGATTATTAA

Coding sequence (CDS) from alignment at sc0000059_pilon:489950..498540-

>XLOC_009424 ID=XLOC_009424|Name=XLOC_009424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=758bp|location=Sequence derived from alignment at sc0000059_pilon:489950..498540- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTTGGAAAAGGCCGTCCGAATATCATCCTCCAATCGCACGTTCGGAA
ATCGTCCATCCAACGTCCGTTGTCCTCCCAAATTTATCGTTTCCGGGATT
CATTCTATCCGGAATTCTCTCCTACCGTATCGTCACAGATACTCCATTTC
GTTCAGATACCGCACCCAGCGTCGTATCGTTTTATCGGTATACACACCAA
ATTGTATACAATCCATCATTTCGTTGTTGATTCTCCCGTTGCAAAACGCC
ACTTCTGCCCCGCCTCGTTCTCATGCGTGGTTCGCCCTCAATCATTTGGA
AAAGGCCGTCCGAATATCATCCTCCAATCGCACGTTCGGAAATCGTCCAT
CCAACGTCCGTTGTCCTCCCAAATTTATCGTTTCCGGGATTCATTCTATC
CGGAATTCTCTCCTACCGTATCGTCACAGATACTCCATTTCGTTCAGATA
CCGCACCCAGCGTCGTATCGTTTTATCGGTATACACACCAAATTGTATAC
AATCCATCATTTCGTTGTTGATTCTCCCGTTGCAAAACGCCACTTCTGCC
CCGCCTCGTTCTCATGCGTGGTTCGCCCTCAATCGTGGTCCACCCTCATC
CTCAATAGTGGTATACTTTATCAATCGCAGGTCACCTTCGTTTGAATTGT
CTTCCGCCCTCGATTATTAATCGTGGTCCACCCTCATCCTCAATAGTGGT
ATACTTTATCAATCGCAGGTCACCTTCGTTTGAATTGTCTTCCGCCCTCG
ATTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_009424XLOC_009424-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059_pilongenomesc0000059_pilon:489950..498540 -
Properties
Property NameValue
Aaloc295-381:88
Aaloc247-291:8348
Aaloc4-246:8592