XLOC_009397 (mRNA) -

Overview
NameXLOC_009397
Unique NameXLOC_009397
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000380_pilon:201928..203359-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009397 ID=XLOC_009397|Name=XLOC_009397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1432bp|location=Sequence derived from alignment at sc0000380_pilon:201928..203359- (Clytia hemisphaerica_ch_hm2_pilon)
TACGAGCACACTATTATTCCACAACTGTTACAGTAAGTTACGTTTTTAGT GATAAATGATTAGTGGACTTATAAATCAGTTAAAAAGCAAGAATATTCTA GCCAAAAGCAGATTGGTTTACAACATTCTGGTCTTTAATTTTACTTATCA TCCTCAGGACCTTGATTTATATAGTTATGTAACTTTTCTTATTTTGTAGT GCGGATTTCTGTGTGGGACGTTACCCTCAATATCTCCGCAATATGCATGA AGTGTACAACAGAAGAAATTCAGATGTTGTGTTTGGGCCTAAGCCATCTG AGTTCACTGAGAATCAAAGTTATGTTGTCATGATGTTCACTCCTGAGTCT TTTGGTGATTCTATAAAGCCTTTGGTTGACGAATTTCCGCGATCCATAGG CCAGGCACGCTCCATCTTGTGGCAGATTGCCCACGGCCTAGCAGACCTCG AAGCTGATCCATTCAATGGTGAGATTCGTGATCTGCACCCGATGAACTTG GTTGTTGAGCAGGTAGGCTTTTTTTCTTTATTTTCCAATTTTTGCCTCAA GGGAACATATAATGAAAGAATCACAAGGGCCTCTTAATTTGAATACCTTT ACAATGAGGTCTGTTTGAATCTTTAATTTAAAATATTAAACTAAATTTCA GAAAAGCCTGAATTCAATCTCATTTATCGTTTTGGCTTAACCCTTTTAGG TTCCACGACAAACCATGTGGCGTGGTGATAACCATTACTGTAACTATGGA GTACAAGTGGGTATAGTGAACACCAGCAGTATGCGACTGGACCTCTCCGG TGGTACAGATGGTATTGAGACGAACTTCTTTGACATCGGGCGTCATCAAC ATCTATTTGAAGGAAATACCATACTCGAGAAGACATACAGAGAAATGAGA TGGGTGCTTGAGTAAGAATCATTCACACTTGTTTACAAACAACTTTGATA AAAAATTGGCTCATGCTCTGCTGTTAGTATTCTTCCCAGGCTTTAAATGT CTCTATGAAGTTCGCTTTCTTAGTATAAGTTTTTCTGAGGAGCAGGCTAT TCCTAACTTTGTCTTCACGTTCAGCCTTGTTTTCCCATAAAATTGTTTTT ATAAAAGAGTATTTTAAACCTTTGAAGATGGGTGTCTATCTTGTCAATTT GTTGTTTTAGATTTTCAGGGAGTATAAGTGATTTGGTCGTATTATCCGTT TTGGAAATGTCATGATGACCTTTAGGACCATTCGAAATAAGACTCTGTTG TTCTATTTTTCAGCAATGATTGGGAGAGGTTTGAACCAAAGACAAATATG CTCTGGTTGAGTTACCTGGCAGCCTTATTTTCCCAGGTCGTGGAACCTAA GGGGCCAGTTGCTCAATTGGCTGGTTTGGCTCAGACCTTCAAGAAGTACA GAAGTGCTACTGAAATTTGCCAATACTTGTAG

Coding sequence (CDS) from alignment at sc0000380_pilon:201928..203359-

>XLOC_009397 ID=XLOC_009397|Name=XLOC_009397|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1452bp|location=Sequence derived from alignment at sc0000380_pilon:201928..203359- (Clytia hemisphaerica_ch_hm2_pilon)
TACGAGCACACTATTATTCCACAACTGTTACATACGAGCACACTATTATT
CCACAACTGTTACATGCGGATTTCTGTGTGGGACGTTACCCTCAATATCT
CCGCAATATGCATGAAGTGTACAACAGAAGAAATTCAGATGTTGTGTTTG
GGCCTAAGCCATCTGAGTTCACTGAGAATCAAAGTTATGTTGTCATGATG
TTCACTCCTGAGTCTTTTGGTGATTCTATAAAGCCTTTGGTTGACGAATT
TCCGCGATCCATAGGCCAGGCACGCTCCATCTTGTGGCAGATTGCCCACG
GCCTAGCAGACCTCGAAGCTGATCCATTCAATGGTGAGATTCGTGATCTG
CACCCGATGAACTTGGTTGTTGAGCAGTGCGGATTTCTGTGTGGGACGTT
ACCCTCAATATCTCCGCAATATGCATGAAGTGTACAACAGAAGAAATTCA
GATGTTGTGTTTGGGCCTAAGCCATCTGAGTTCACTGAGAATCAAAGTTA
TGTTGTCATGATGTTCACTCCTGAGTCTTTTGGTGATTCTATAAAGCCTT
TGGTTGACGAATTTCCGCGATCCATAGGCCAGGCACGCTCCATCTTGTGG
CAGATTGCCCACGGCCTAGCAGACCTCGAAGCTGATCCATTCAATGGTGA
GATTCGTGATCTGCACCCGATGAACTTGGTTGTTGAGCAGGTTCCACGAC
AAACCATGTGGCGTGGTGATAACCATTACTGTAACTATGGAGTACAAGTG
GGTATAGTGAACACCAGCAGTATGCGACTGGACCTCTCCGGTGGTACAGA
TGGTATTGAGACGAACTTCTTTGACATCGGGCGTCATCAACATCTATTTG
AAGGAAATACCATACTCGAGAAGACATACAGAGAAATGAGATGGGTGCTT
GAGTTCCACGACAAACCATGTGGCGTGGTGATAACCATTACTGTAACTAT
GGAGTACAAGTGGGTATAGTGAACACCAGCAGTATGCGACTGGACCTCTC
CGGTGGTACAGATGGTATTGAGACGAACTTCTTTGACATCGGGCGTCATC
AACATCTATTTGAAGGAAATACCATACTCGAGAAGACATACAGAGAAATG
AGATGGGTGCTTGACAATGATTGGGAGAGGTTTGAACCAAAGACAAATAT
GCTCTGGTTGAGTTACCTGGCAGCCTTATTTTCCCAGGTCGTGGAACCTA
AGGGGCCAGTTGCTCAATTGGCTGGTTTGGCTCAGACCTTCAAGAAGTAC
AGAAGTGCTACTGAAATTTGCCAATACTTGTAGCAATGATTGGGAGAGGT
TTGAACCAAAGACAAATATGCTCTGGTTGAGTTACCTGGCAGCCTTATTT
TCCCAGGTCGTGGAACCTAAGGGGCCAGTTGCTCAATTGGCTGGTTTGGC
TCAGACCTTCAAGAAGTACAGAAGTGCTACTGAAATTTGCCAATACTTGT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_009397XLOC_009397-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000380_pilongenomesc0000380_pilon:201928..203359 -
Properties
Property NameValue
Aaloc562-729:169
Aaloc349-558:734
Aaloc37-348:1233
Aaloc4-33:1433