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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000380_pilon:210229..212883- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009396 ID=XLOC_009396|Name=XLOC_009396|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2655bp|location=Sequence derived from alignment at sc0000380_pilon:210229..212883- (Clytia hemisphaerica_ch_hm2_pilon)
AGAGGTCAAGGTCAAGTAGGAACAGAAAGGTAATTTATTCACTCAAGTTT
CATCTAGGTGTTTTCAAAAGGATAGAGACTTTTAATAAAGTATCTTATAT
TATGGCTTTTACAACATTTTATTGTTAATTCCCAGTATTTTTCAAGAAGA
TGTAACCGACTCATTTAGAAAATCTAACAAATGAAATTATTCTCTTTCTC
CGAAAGTGGCAGAGTCCTATAATCTATTCTCAAAGATATCAAAAATACCA
ACAGTCAGTGAAAAAATTTGACCTAGAAGTACCATGCCATGATAGTAAAT
TTGAAATGGATCTCCAATTACATTTTATTACACTCCATGCATCAGTCTAC
AGCTTTATTGAATTGAGAAGTGCATTTTTGGCATACAGACTAATATTATG
TGCCAAAGGAAGAGGCTTCTTATTGGACCTACCCGGTGGAGGTCCTATAA
ATAAACCCATTTTCTTATGTGCGTTCGTTACCAGCTTTTCTCAAGATTGG
CTCATTCTATCTAATTTTTCTGATTTTTGGCACAAAGGTGTACGACTAAT
CCTCAAATGTGACAGAGCTTGATTTTCGAGAAAAAAATTTTTTGGGCAAA
TTTGGGCCAAAAAAACAGATAAAAGACAGGTTTATTGGACTTATCTATGG
TTTTTTCTGAATTTTTGCACGAAAGTAGTGTATCCTCGTAGGTAACAGAT
GGGTCAAGCAGATTTTTGCAAAAAAAATGCATGTTTATCTATAAGAACCA
CTATTAATCACTATAAACCACTATTAATAAGCATAACCAGGTAGGTCCAT
AAAAGTATCGCTTGTTTTTTATTTTTTCATCACTTTTTATTTTCTTGTGT
TTTTCAGATACCTTCAATTCCATCCCGAAGGTTCCAGAATTTACAAGCTC
TTCCAAACAAAGGATTACCAAGACAAGAACAGAGATTATATTGATTTTTA
TCAATCAGAGGTGGAGATCTATAGCTCACAAGGACATGTGATGCTATCAG
ATACAGCAACCAGGGCTGTCGTTTTTCCAGTTGACAGTAAGGACAAAATG
CTATTTTTTGACTTTGAAGAGATCAGTTAGACTTTGAAATTCACAGATTT
GTTTTCAAAGTCTGATTTTCAAGATGCTGGAAATCTTTGTTTTTCAAGAT
TTTCATTGAACTTTTTCCTAACATTTCTTTGTTTTTTTTTTCACACAAAA
ACATTATTGATAACAATGCCCATCATCAAGCATGATTCAATTGTCAATAA
AACTGATTTTTGAGGCCGATACCTTCTACAAATTGCTGAAAAAGCGGAGA
ATCGCCGGAAAAACGGTTTCTCTTGAATTTCTCGAGTATTTCTCATTACA
TTTTTTCATGAAATTTTGCACAGTGATGCAAAATAGCAATACCTAAAATG
TGATGGAGCCTGATATTTTGGAGAAAAAAAGATTGCGGTTAAAAATGCCA
GAAATATGCTGGAAAAACTGTTTTTTTGGCATTATGAAATTTAATGCGTT
ATGCATTTTTGCTAAACACTATATTTTCTGACTGATTATTTTAATTTTTC
TCCTTATTGCTATCTAAATTTCATCATCAGGTAGTTCCATTCAGCATCTA
GCTTTTTTTCTAGCTTGAAATCTCTTAGTGATTTCTACTTACTGTTTTAA
ATGCATGCCTGACCCCATTAAATTGTTTCTGGAAGCTAGACTCAAGTTTT
CAAGGTTATTGTACTGTATCTGTTGTAAACTACAAGTTAGATTTAAAAGA
ATATCTCTTGACAGATTATAAAGTATGAAGTTTGTCAACCAATTAAAGAA
ACTTTTTTGAAAAAAGATTTTGAAAACAATTTATTATGACAACCGATTCA
TATTACCACCTTGGGAACTTAAAATTTTTGCAATCTGATGGTAAATTCTT
ACTTGTGAATCTAATTGGCTTTCAGAATATCTTGAGTCTTTGAAGGAGTC
TTGATCTTTTCTACATTAAAAGAGCTATAACAATTCAAAGTTTAAGTCAC
TGTTCAAAATATATTAAAAGCCTTTTATGAAATTCCAATTAAGTGATGAT
TTTTACCTTTAGATTTTCTATTTAATCTTGTCTTATCTGTTTTGTATTGT
GTATTTTGTTGTTGTTGTTTCATTCTTTTGCATTGATAGGCTTGTACAGC
AAGCTCTTTCTAATAAGACAAAAAATTGTCCAATAGACCCTGTATTTTGC
ACATGGGAAATTCTTCGTAATCTTTACTTAAAATGGTCTAGGAAATTAAT
GAAATTTACATAGTACACATAATCTCATATTTACTGTTTGTCCTTGCTAT
TCTGTGTTATATTTAGTTATACCTAGCGTGAGAGAATAAAAATATCATAC
ATAAAAATACAAAATATTTCATTATTTCTTTCTGTCTAGGTTTGGCACCT
GCAACTCGGAGTAGAAAGCGACAGAGAGGTTAGAAAATTAACTTTGCACA
TCTTTGCTCTAGAGATACTCTTTATCCTCTTATTGTACTATTTCAACCCC
CTTTGCAATTGGTCCTCTTATCCATTTATGAAATTTGGAAATTTTTCCAA
CCCTCTGTTCACCCCATTTATTTGATACCATTGCATGTTTTTTATTTCAC
TCTAGATGTATTACAGGAAGCCAGCAATGAAGCTAGTGGTGAACAACAAG
GTGAA Coding sequence (CDS) from alignment at sc0000380_pilon:210229..212883- >XLOC_009396 ID=XLOC_009396|Name=XLOC_009396|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=594bp|location=Sequence derived from alignment at sc0000380_pilon:210229..212883- (Clytia hemisphaerica_ch_hm2_pilon)
AGAGGTCAAGGTCAAGTAGGAACAGAAAGAGAGGTCAAGGTCAAGTAGGA
ACAGAAAGATACCTTCAATTCCATCCCGAAGGTTCCAGAATTTACAAGCT
CTTCCAAACAAAGGATTACCAAGACAAGAACAGAGATTATATTGATTTTT
ATCAATCAGAGGTGGAGATCTATAGCTCACAAGGACATGTGATGCTATCA
GATACAGCAACCAGGGCTGTCGTTTTTCCAGTTGACAATACCTTCAATTC
CATCCCGAAGGTTCCAGAATTTACAAGCTCTTCCAAACAAAGGATTACCA
AGACAAGAACAGAGATTATATTGATTTTTATCAATCAGAGGTGGAGATCT
ATAGCTCACAAGGACATGTGATGCTATCAGATACAGCAACCAGGGCTGTC
GTTTTTCCAGTTGACAGTTTGGCACCTGCAACTCGGAGTAGAAAGCGACA
GAGAGGTTTGGCACCTGCAACTCGGAGTAGAAAGCGACAGAGAGATGTAT
TACAGGAAGCCAGCAATGAAGCTAGTGGTGAACAACAAGGTGAAATGTAT
TACAGGAAGCCAGCAATGAAGCTAGTGGTGAACAACAAGGTGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000380_pilon | genome | sc0000380_pilon:210229..212883 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 250-297:49 |
| Aaloc | 211-246:265 |
| Aaloc | 31-207:1798 |
| Aaloc | 1-27:2656 |
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