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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:581221..587196+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009327 ID=XLOC_009327|Name=XLOC_009327|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5976bp|location=Sequence derived from alignment at sc0000098_pilon:581221..587196+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGCAGATCTTTGTTGGTCGATTGTTCGCAAGAACTCTTGCTTCCT
TGTCAAAAGTCTTGGAAAGACATTGACTAAAGTAGGTAAAACATTTAAAT
TGTGTAATTTTGGTTTGGAAATGTTCAATGATGTCTGTTTCAAGACGGGA
CTGACAATGATGATACCTTATTTTACTGagaacataatttttttctccat
tttcAcGAGTTTTTGTAGTTTGATAACTAGatatgacagcaaaactttaa
TATTGTTTTAGGAACCTAACAATTTGTCTGGAGTCAATAACTTTGCCTCA
AATGGATACATCAACAAAAAGGTataaattcaactttttgtgtTTATGGA
GTGACTTGCTCATTTCACTGCGCTGTTATGCTAGTTCTTACTAGGCATCC
AGGATGGGATTCCTGTTCTTTTATAACTGAAGATTCTCTGTTGGATGCAA
AGATTAAGTTTGACACTAGTTTGATGCTGTTTCACATCTATTGACTCAGC
AATAGGGTTTCAAGACATTCAAGATCTTATCTTTTAGATTTAGTTTGTGT
TTTCTCTTTGAGTTCAGTAACACCTGTTCTGTCTTAAAGTTATAAATTAT
AATGTAAAACAAGAACCTTAAGTCCTAAAgaatgttcaaaaattttagaa
caGCACAGCCTTAGGCAAAATTTTCTGTGGTTCTtacgaaaaatcttttt
tctgtcAATGATGTTGATTCAAGACGGGACTGATTATGATGATCCTTTTT
TAAactgagaaaaaaactttcacctTTCCCAGAAATTATTGTGTCATGCA
GCTCTGGAAGAATTAGGAAAATTCTGgaataaaacatttaaaaagaaaat
gatcgCAATGATGATGATTAGTTTTTCTTACTCCAATATTTATGGTGATA
CAACTTTTATTTCACCTCTGACAAACTGAATTGCATAATATATCTTCTGA
ATGTTAGAACATTTGACAAATATTGATTTCATCTTAGAAAATCATTATTT
GCATCCAGGATGGGATTCCTGTTCTTTTATAACTGAAGATTCTCTGTCGG
ATGCAAAGATTAAGTTTGACACTAGTTTGATGCTGTTTCACATCTATTGG
CTCAGCAATAGGGTTTCAAGACATTCAAGAAGATCTTATAGATTTAGTTT
GTTTTCTCTTTGAGTTCAGTAACACCTGTTCTGTCTTAAAGTTATACGAT
GGCAGAAGGCAAAGTTGTCGATtgcatctattttgattttgcaaaagcgT
TTGACACCGTCCCTCACAGGAGGTTAAAGAAAAAACTGGAATGTTACGGG
GTAGGTGGAAGTCTACTAAACTGGATAACATCGTTTTTGTCAGATCGCAA
GCAGCTGGTCAAAGTCAACTCAGCCAAATCAACAACTAACCCTGTCGTAA
GTGGGATTCCtcaaggaagtgtacttggacCTCTGCTATTTgtcatttac
atcaatgatttgCCAGACAAAGTAGTTTCGGATGCATTTCTCTTTGCTGA
TGACACGAAAATAGTGAAGACTATAGATTCGGTAGAAGACTCTATCGTTG
TACAAAGAGATATCGATGAAATGGAAAAGTGGTCTCAGGATTGGTTACTC
ACGTTCCATCCTGATAAATGTCATGTCTTAACAATAGGTAAATTCGCCAA
CATCAAGCATGCACACAGATACCAGCTTGGAGGTAAtgaacttgaacatg
tttttgaagaaaaagacctcGGCATCTTGATCGATTCGGAACTAACTTTC
GAGGAGCATATATCCAAACAGGTTAACAAAGCAAATTCAATCCTTGGAGT
TATCAAAAGAAGTTTTAACGACTTGAGTCCTTCGGCACTTTGTACTCTGT
ACACCACCTTTGTCAGACCTCACttggaatatgcacaatcagtaTGGCAG
CCAAAATTACGTCGTAGTATAAACTTGATTGAAGGTGTTCAAAGACGGGC
GACAAGACTGATTCCTCAATATCGTAATCTCCACTACGAAGAACGTTTAA
AAAGACTCAAGCTTCCATCTCTTGAGTTCAGAAGGCTTTTCAGTGATATG
GTGCAAATAtataagcatattcatttttacgaCCCACAGACAACTCAgaa
caagtttgttaaaaaatccCGTCCAACCAGATTCCATGATCATGAATTTG
TTCCAAACTTTGCTGATGATGGTTTTCGTGGGGCTCAGACGAAATCTTTC
TACTATAGATCGATCCCAACATGGAATGCACTACCGCGATTTGTCATCAA
GTCGACCTCAATCAAATTGTTTAAAGAAAGCCTAAACAAAGCGTGGGAAA
AACACCAACTAAGATACTTGACATATTAACATTGTAATTAGAAATCGGTT
CGTAGAGGTCCACCTCGGGCCTGTGAGCTTGTATacatcataataataat
aataataataaattataatgtaaaacaagaacatcaagactaaaaaatgt
tcaaaaattttagaaccGGCCGTGCGGCCTTAGCCAAAATTTTCTGTGGT
TCTtacgaaaaatctttttttgttcaatgATGTTGTTTCAAGACGGGACT
GATTATGATGATCCTTTTTTAAACTGAGAACAAAACTTTCACCTTTCCCA
GAAATTATTGTGTCATGCAGCTCTGGAAGAATTAGGCAAATTCTGGAATA
GtacatttaaaaagaaaatgatcgCAATGATGATGATTAGTTTCTCTTAC
TTAAAATATGGTGATACAACTTTTATTTCACCTCTGACAAACTGAATTGC
TTGATCAGAGTATTTTGCCCTGTCCATGTATCCCGACTGTAACTTCAAAC
TCTCACTATCACTTCTTTCATATTTTATATTTCGAACACCTTTAACCata
ttttttcctgaaaaaattaTACTGGCTCAGCATTTATTGTAGAAAATTTG
CACAACTAAATTTTGGATCATTCTGAAATTAGGCATAGCTAGTTTTGATA
TGCAATAATGATGATTAGTTCTTCTTACACAAATCATGGTGATGCAACTT
TATATTTCACCTCTGACAAACTGAATTGCAGAAGTCTGACAGCTAACttg
ttacacatttttttcttccatttgaGCTCCTTAAATTTTGGCTGAGCCAG
GGAGTggtactaaaatccaagacacatgagtactaaaaggatttttgaca
tacccccacctaatttttgaaaaaggaattttagtacacatgaactaaat
tttttttgacattttagcataGTGGCCACCTAAGTTAGCCTTATTTTGGA
ATTCGGTTCAAAGAATGGGTCTTTTGACCTTCaaaaaaaTGCCAACTCTG
GTTATTTAAGCTGTCCATGAACCTGATCTATCTATTCTACTCTAGATAAA
GACTCAGAAACAGCCAAGACACTTTTGCTCTGCTCTACTTTAGTTATTGC
AAAGCTTGATTGGTTATTATTCACCTCTAGTTTACAGCTTGCCATTCCTT
TTCTATTCAGTTAATCATGGTTCTTTACATAAACAAAGCATTCaactttg
aaaacattttttattccttAGTATATAAATGCAGAAcattaaatacaccc
ctgtttcacagcccaggtggaacctttttcctcagtggggataaaaattc
ctattgaaatgctaatggggatagaaattctattgatccaaggttaaaaa
tcccattggggatggtttttgagtgcaatttttaaacatagtatttcgag
tggggatgaaatcaaatttaatttcctagtggggatgaaattcaagggta
ttttcccacctggaaggaaatttttgcttaatttgtgacacaggggtgtt
taaatcTTATGTAGAAagttgttattttttcattttgcctaaaatgctcg
ttcaatagttaaatttcctaaaatttggtaaattttagtaccgtacacat
ggtactaaaatgcttagtacacatggtactaaaatgcgctaaggcttttt
ttgtaataccaccacatgactaaaggtcatgatgtttgaaattttagtat
tcccccccccTGGCTGAGCCTAGATGTGCTTgtacttatgttcttataaa
ctgtgttcaaataaaaaacatattcaattcattttgatatttcagccctT
TTAAGTTGAGtgtttaaaaataaagtctctctCAAAAGAGGTATGGTGAT
ATGCAATAATGATGATTAGTTTTTCTTACTCCAATATTTATGGTGATACA
ACTTTTATTTCACCTCTGACAAACTGAATTGCATAATATATCATCTGAAT
GTTAGAACATTTGAAAAGTATTGATTTCTTCTTAGAAAATCATTGTTTGC
ATCCAGGATGGGATTCCTGTTCTTTTATAACTGAAGATTCTCTGTCGGat
gcaaaaattaagtttgacACTAGTTTGATGCTGTTTCACATCTATTGACT
CAGCAATAGGGTTTCAAGACATTCAAGACCTTAtagatttgttgtttttt
ctttgagTACAGTAACAGCTAAAAAGATTGTTTTGGCTTGAATGTAAAGG
CCTGGAAGCCGACTATTCTCATTATAGTATGATTGTAGCGTGCAAACCAT
GCCGAAAGTGACATGAGTGTTTtctgatttggaaatttttactATAATTG
TTCAGATCCTGGACACTCATAACAGCTTTTGTCAGCATAATAGGTTTTTA
TTGTTGAACCtgtctgaaaagaaaatttaaaactggCAATCTCTGCTGAA
AGTTTCTTATATAGTGGGGCTTTTCATTCACAAATTGCCAAGATATAGAA
TCAACAGCCAATTTTCAATGAAGTTCTTTAAATTGTAGCCTTCTACTGGT
GCTGTTGATTCAACAATCTTTTGCATCATTCCTTATTTTCTTGCTAAAGC
TCACTCACAGTGATGTGCTAATTAGTAACGAAATGATTTTTCTACACAAC
GTCCTCTTTTTTAGACAGTTGGTGTAGATGCTGACCCAAGTGGCAAAGGA
GTCGTCCTTTCTATTCGCAAATCAAAAAGTAAGTGGCACTGCATCCTTTA
ATTATTTTGCTTCTATCATGGAGAGGTAAGTTCTGACTTAAACTTCAGTG
AATTATCGATCATCTTTGACCATCAGTCATTGGGGCATGGAGTCCTGTAA
AGCCTGAAGAGCTAGATGGAGTGATCAAGCTATTCCAAGCAAAAAATGAA
TTATAAAATTGTTggtattgttttcaaaaagcagCCAGACTTCCAATTGG
TTGAGTGCTAGAATTCTATTTTAACGTTCCGTGGCCTTCGGGAGGATTTC
CTACTTAACAGCACATTTTTTCGGCGGAAGCATGCTAGATCTATGGCTAT
AGGTAGCAACTTCTCAAattaatagaaaatattttcctttttcagatGGT
AACAAACCAGCCAAATCTGTTAGCCGAACCACTGTCCGTGGAAGCCGACA
CTCCATTAAAGTTATCCGAGATACTTTAAACAAGAGCGAGTACCGCAAAG
ATCTGTCTGACGTATGTGTTTTATCTTGTGTGCACAACATGGTTCGGGGT
TCTGACGGATATGACTAGAGTACTTGGAGGTGTCTTTTCTTTGGAATATT
TCTCCTTGAGGCTTCGGGCCCTTGTAATGGAGACATCAAATAAAAATAGT
GAATTTTCTTTAGATACTCATCACAATTTATATCATTTACTCaataaatt
taatgttttttttcacagAAGCTACAAAGGCTTGGAAGCCGACTATCTTT
ACTTTAGTGTAATTGTAGCGTGCAAACCAACGCCGAAAGTGATCTCTTGT
GTTTTCTGATTTCATCACTAATTCAATAGGGATTGAAATCCTGGACACTT
GAAACAGATTTCAATTTCACGAAAGGTTGTATTTTTAAAGTCGTTCCTGT
tccaagaatttttcaaaatcagtttGTTTCCTCCCTTAGATTGCCATTCG
ACGTGCATCGGCCATCATCCGAAGCCAAAACACTTCCGCCGCAAAAAAGC
AAAGATCCCGAAGAAAGAAGAACTAA Coding sequence (CDS) from alignment at sc0000098_pilon:581221..587196+ >XLOC_009327 ID=XLOC_009327|Name=XLOC_009327|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=816bp|location=Sequence derived from alignment at sc0000098_pilon:581221..587196+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGCAGATCTTTGTTGGTCGATTGTTCGCAAGAACTCTTGCTTCCT
TGTCAAAAGTCTTGGAAAGACATTGACTAAAATGAGTGCAGATCTTTGTT
GGTCGATTGTTCGCAAGAACTCTTGCTTCCTTGTCAAAAGTCTTGGAAAG
ACATTGACTAAAGAACCTAACAATTTGTCTGGAGTCAATAACTTTGCCTC
AAATGGATACATCAACAAAAAGGAACCTAACAATTTGTCTGGAGTCAATA
ACTTTGCCTCAAATGGATACATCAACAAAAAGACAGTTGGTGTAGATGCT
GACCCAAGTGGCAAAGGAGTCGTCCTTTCTATTCGCAAATCAAAAAACAG
TTGGTGTAGATGCTGACCCAAGTGGCAAAGGAGTCGTCCTTTCTATTCGC
AAATCAAAAAatGGTAACAAACCAGCCAAATCTGTTAGCCGAACCACTGT
CCGTGGAAGCCGACACTCCATTAAAGTTATCCGAGATACTTTAAACAAGA
GCGAGTACCGCAAAGATCTGTCTGACatGGTAACAAACCAGCCAAATCTG
TTAGCCGAACCACTGTCCGTGGAAGCCGACACTCCATTAAAGTTATCCGA
GATACTTTAAACAAGAGCGAGTACCGCAAAGATCTGTCTGACATTGCCAT
TCGACGTGCATCGGCCATCATCCGAAGCCAAAACACTTCCGCCGCAAAAA
AGCAAAGATCCCGAAGAAAGAAGAACTAAATTGCCATTCGACGTGCATCG
GCCATCATCCGAAGCCAAAACACTTCCGCCGCAAAAAAGCAAAGATCCCG
AAGAAAGAAGAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:581221..587196 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 322-408:5890 |
| Aaloc | 208-321:5348 |
| Aaloc | 142-204:4915 |
| Aaloc | 82-141:262 |
| Aaloc | 1-81:1 |
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