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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000401_pilon:49998..56721+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009268 ID=XLOC_009268|Name=XLOC_009268|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6724bp|location=Sequence derived from alignment at sc0000401_pilon:49998..56721+ (Clytia hemisphaerica_ch_hm2_pilon)
agaaaattgataaataagataaattacaaaaaatacaaaatggttGCCTG
GTGGAATGGCGTTGTTTTGTTCATGTGCCTGGCATACAGGATAACATGTT
ATGAAGGTTTCGATCCAACTGGTGGAGTTTCAgatgaaaagaaattaaaa
gtaaGTTCATGTTTGTATCAACGAGATATagtgttgtttttattggacCT
ACTAAATAATCCCGTCCGTTCGTCaatctgttaccagcttttctcgagat
tagctcattagtttttggacctaccccggagGTCTTATAAATTAAAcgat
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgtctgttaccagcttttctggGGATTGGCTCATAAGTT
TTTTCTGATCTCTTGCATAGTAATACATGACACtacccaaaaagtgacgg
agcccgattttcgaaataaagtttttttgggcaaatttaggccCAAAAGA
AATTgcctcattagttttttctaatttttggcaaaaagatAGAGGACatg
gttctctaaaaagtggcttaagccatttttttccggaaaatattttttga
ccgtagaataaaaatcggattttcgaATTCCCTtcgttagtttttttctg
attttttacctAAATACAGAGGGTATAGTTCTCAAAAAAGTAATAATCCG
gtaaaatcggattttttatttgagataatttccttttttcatttttaggg
aaaattaccatttctcgcgattggtttgattttttttctgattttttaat
ttgcactttcttaccattgctgtcattttttCTTGTCCAGAATATGACAA
ATTTAGGCCTGTGGGTACTAACTGCTGTAAgggggggggTGTACTATAAA
TTTGAACCAAATCAAATAGTACTTTCGAGTTACTAACTGCTATGCGGGAT
GGTGCATGCTATAAATTTCAAGACAATCAAATGATATCATAGAGtactac
tttaatgtcagaaatttttgacatttttgcgAGAATTAAATGGTcgcgaa
aaaaatgaaagtgcttcaaatttggaATTTTTTTTCAAGCTCACTTATAA
AAAATGGTCAAATCTCCCTTTCTAAAGTTTTTATAGCAAGTGACTTTaac
aatcatcaaaacaaatacTTTCATTctctactttataagaaaaccAGGTA
AAGATTTTTACTCTATTCCCATGATTCGAGTTTAGTGTCAACTAGGGTAC
TAAAAGGTTCCAAATAGTGGCTACCTTGAGTGCCGGCCACTCAGGACCAC
TAAACAGGGCAGAATAGGGGGTGGTGCTAACCTGCCTATAGTCAAATGCA
CTTAGTACTACAAAATTCGGTAATCCAAACCTTCTAGATGTTAAAAATTT
TCCTGACCTTCAGAGCTTCTGCTTGACGGAAGAAAATTCTCCATCGAGTG
CCTTCTGGTGTTGTGATTCAGTTGagtttttagtgtttgtagtgttttta
gtgtttttagtgtttttagtgtttgtagtgtttttagtgtttCATTGTGT
CCCCTGATTATAGATAAAAAGATTAATTAATTAAGCAAGCCAACCTCGCT
AATGAAGGATCTAGACGACGAAGGCCAATTCTCATTTTTGGCCAGAAGAC
TCACCTTCCCAACAGGGgatacagactatttctggaatatcCCAATTCTA
TCCTTAGCTAGAAGTAACACCTCCTCAACAAAGGGGGTACAGATAGACTA
TATCTGGAATAGCCCAAATCCTCTCTTTTAGCAAGAACACACGCCACCCC
GTACAGACTATTTCTAGAATAGCCCAATTCTCTCTTTTCAGCTAGAAGAC
AAATACAAAGTGGAAGATTGTAAATACCGCACACAAGAACATGACATAAT
ACACTGGCATTACAAAGGAATGCTACTCAACGGTAAAAACTTTGGTGAAG
GAAATTACCATGCACAACTGGGCCACCGTACTATCATATATGGTGTAGAC
CAAGGAATGAGGGGTTTGTGTGTTGGTGAAAAACGTAGAATGACAATGCA
CCCTGATTGGGGATACGGAACAAGTGGGACTGGTAAGTAACGTTTCAATT
AGTGATTGATATTGATTGCCTTTTTCCAGCGTTGCATACCCTCAATAGAT
ACAAATACTTTTAAATATGTTGTTACTTTTGTCTCTTATAGTGAGTATAG
TATTTCTAATACTAAACGACCAATTTTAGGCCAATCAGGTGTTAGTCTGG
TATGCTAGACGACTATGTAATtgagaaaataagcaaaaagatGGTGGAAG
GGACAAACTGATGTTATACCTTAActattatcgtattatcatataacacc
catgTTACTGTATCACACGggttataaacgactccagagTAAACTGTaac
aaaattccaaattttcCTTAGATGTTTCGATATGTATAcaatatattttc
aataaaCCTTATTTTTCAGACAACATCCCACCAAATTCAGTACTTGTGTT
TGATGTACACCTTCTGAAAGTTGAAAGACCTGGTGATGGTGTCGAGACTC
TAGATGAAAAGTTTGAACAAAATGGTGGCGTGACTGCTGAAAATAAACTT
GTGGTATGTTTCAATTAAATCTTGTCATTATACTGTTTTCAAATCAAGTG
TATTTGGGCTCGAAAGCTGAGAAAAACTTTGCGGAAATGTTAATCCTGAA
ATTTCAACCCTCCTGGGAAAGTAACGCAATGATTTTATCCCCGTTGTAAA
TTGacgttttcataaattacgtcacgcgTAACtcttgcctcgttttcaaa
atattgctatagTAATTGATTCCGagaggagttcataagaagtttaCTCT
ATTTATACAACTAACACTTGAGCACTCAAGagaccttggtaatggtttca
taACGAGACAGTTGTttcactcaaaataatttatgagaAGGCCtattgga
aagaaaaatttcactttagaACCACGCCTACTGGCTTTTGTGAGCTATGA
TGAGTATCAGATATTCTATCCCTGTAGAGATTCTcatagtaatctcatgg
ttgattgaaaatCGATTGACGTTTTGGCtgacgttaatttgtaattttcc
tccaagcttttgtaatttctctCTTAGATTTTGTAATctcccgcaaaagt
gaaatttccatcgtttggaaattcatcactTTTTACGAATTTCTTATTAA
CTTCGAAGACTTAAGTAAATGGAAtctatccaattaaaactcgattcgcg
tttctataactttgagacctctttttaaagtttcagattgatttccagtg
ttaaattaaCCTCTTccagaattgttagaatttcaatccaaaccatgaga
ttaaccaggaatcacATCGCTGCACtcgggaattttcaaaaaatttcaaa
attgacctcgggaaatttatgcCGATTACccctcataaccatgagattac
tagtgcAAATTTTCATCGCTACTAAAGGAAAGTCGTTCCAACGGGGCgct
gacacaggggtgtgcaAAAGTTTACTTGCCTCAAAGTGAAATGATTGTGA
atatcaaacattttctttgaatgggacaaattcaaattgatgacgtcatc
aaataatgaaaaatcttgactttctgaaaatttttatttgcatCTTTGAT
caatatttgaaattattttcatggTTATCAGCATTTTAATTGACGTCATC
GAAGTATCGATAATCCATGAGATTCGAGGtttttttCGAATTAcgcatac
tctcgggtacctaatagccggggggtttggaataagcaggggggttggaa
aaaatctcaaaatttaataagcgggggggggttggaataaaatgtcctgg
gtggaaatgtTCGAAAAGGCGGCTGGATACATCGGcaaaaggaaaatagg
gcaaaaagagggggaactttcaaaaaataatttcccaaaaatcaataagc
gggggggggggttggaataagaatgtcctgggtggaaaattttcgaaaaa
ttaattagcggccccccccccggctattaggtacccgagagtaatatcAT
TGTTATTTTTTAGCTCAAAGACTTGTACAAGAAAGATCCTGAACTCTGTA
AAATGTCATCTGGTCAGGACGATTTGATTTATTGGAATTACAAAGGGAAA
CTTTTAGACGGCCATGTTTTCGATCAAGGAAAATTTCACGCCAAACTTGG
ACACGGTCAGGTTATCACAGGCGTCGACAAGGCAATGCTTGGTTTGTGTG
TCGGAGAGAAGAGGCGTATGTTTATCCACCCTGATTGGGCGTACGGAGCG
CGGGGCGTTTCTGGAACAATCCCGCCTAATTCTATACTCATCTTTGACGT
TGAGTTGTTGAGTATTGAAAAACCTGACGGACGTAGAGACGAGATTGATA
AACATCAGGAGTTTTCGAAAAAAGCTGACCCTGATCATGAAAAATTAAAG
GTATGGCGTAAAGAAATTAATCCGGCTTACCGATAGTAAGTATGGGACAT
AGCTCGGATGAATTGGGGTATTTTAACATCGGGGTATTGCTAAATGACGT
TTCATTGAAGGTGGTAAAGTTCGAGGCGAAAGAATTGGGTGGAACAATTG
AATTATTGAAAAGTATTCAATATTCGCGTCACAAACTAAATCCAAATAGA
ATGTAAGAGAATGGGTGAAAttcaataaacaaaaattaaaaatttgtgaG
TAAGATGTGCATATTTTTTAGCAAGAGCTTCCTTGCCTTGTGCTATCAAA
AACTATTTGCTAAACATTTTCATACAGCGTACATTTACAGCTACTTGGAA
TTTAAGAATTTCTAATGGAGGGCTTTTATCTTTAAGTATGGTGTCTTTGG
GTGAGTTTACCCATGTaaaaaaaCCATCACATACGCTTAGAAAGACACCT
ACGAGGGTTTTGCGGCAGAGGGATTAAATAAAAGCCAAAAGAGCTAGATT
AGAAACTTCAACCTTTCCAAGTCTTaccttaagatttgcgccgcaaatcg
gtttctttttttgtgtgATAGATCTTTTGAAATCAAGGGGTATAAATATT
ACTTTCGATCTGGTGTTTGTGTAAAAAGGGGGTAGAGCTTATATATACAT
TAATGAGATAAATTTTCGCAGAGATTAAAAGATTTCGCCGGACTTTATTC
GTGGATGGCATTATAGTGGAAcaatattttcaggattttgtgccttttta
cGCTATATCGAAACTATGCCTGTTGGTTGTCGAAAAACGTATTATTAGCG
CTTCGTTGATTTCTCGAAAGAGGTctcattgggacttaatttcgcggatg
acatcCAAATCTGCGAAACCCGTGAAACTTAATCATCACAGAAAtttata
tcattaaaaaaaagtatattgaaACTAGCTTCTGATCCTACATATGAAAT
TCTATTCCACTCCTTCGGGCTTACACATCATTGAAACAGACATTGAAAGG
ACGCACGCATGACTGAGATGTATAACCCAGCTAGGGTTTTTTGTAAATTA
GATTTCCAGGCATCGTCGTATGATGTCATAGAAAAGACGCAGCATTCTCT
ACAAAATCATACTTGACTCCACAGAGATGTAGGCTGAGGCCCATCCCTCT
CATACACATTGACTGCGCGTTCACGACGAATGTCTCTTACACtgaaacaa
aaatcttttgtcaCTGGAGATTTCATATTCCCAGCTGTTTTAATCAACGT
TTATCACCTTCATGGACTTCGTGAACTTTAAAGCATTATTGAAGATTAGT
GACGCCTCCATAGTGAAAATACTGTTGGATATGAccgggggcagtcaggc
aaaatgaccgacgggtatgtgcggtggttaagggtatgtttttcaaaata
tcagaaatgcactgtaaggttggacttttgataaatgcactgtaagggta
tgaatttcactgttttttttctggactGTAAGGATGCtattctaaaagcc
atttttttcgccgCGCATACCGTCAATttgtaaacccactgccccccccc
cctcacgGGATACTGACATGGTAAAAACATTGACTTCCATAAGCATTGGA
CTAAGTTATATCTGCTATTGTTGATCTAGggtttatataaagctcagtaG
GTGGAAGTACCTTGGTGACTTTTAGAGAGATATTAAGGGGTTGCATCGGT
ACAGCGGCTaccatacacgctttttcataagaacattctgaatttttgaa
gcctatgGATGTTTGTAACTCGCTCTTAATATTTAGGTCATCCATTCAAA
CCCaaaaaaaCGTGTGCTACTGCTACTACTAGTGTCCATATTACTtcctt
tttaaaatctgaaacttcatcttttttttcaaaaacagatCGAAGTGACT
TATACGGTAGACAGTGACAAATGTGACAAACAGACACGTAAAGGGGACAC
CATTAAATGGCACTACATTGGAACGTTCACTGACGGTACTGAATTTCATT
CTGGAAACTACACAGCTAAACTCGGACACAGACAAGTTATAACGGGCGTC
GATCGTGGTATGTTGAATATGTGTGTGGGCGAGAAAAGGCGTCTGACGAT
ACACCCAGATTGGGCTTACGGTAAATCAGGGCGTGAAGGTTCAATTCCGC
CCAATGCCACCCTGATATTCGACGTggaactttttgaaattgacaGACCT
GAAGATGAGAAGGAAGAACTGtag Coding sequence (CDS) from alignment at sc0000401_pilon:49998..56721+ >XLOC_009268 ID=XLOC_009268|Name=XLOC_009268|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2496bp|location=Sequence derived from alignment at sc0000401_pilon:49998..56721+ (Clytia hemisphaerica_ch_hm2_pilon)
agaaaattgataaataagataaattacaaaaaatacaaaatggttGCCTG
GTGGAATGGCGTTGTTTTGTTCATGTGCCTGGCATACAGGATAACATGTT
ATGAAGGTTTCGATCCAACTGGTGGAGTTTCAgatgaaaagaaattaaaa
agaaaattgataaataagataaattacaaaaaatacaaaatggttGCCTG
GTGGAATGGCGTTGTTTTGTTCATGTGCCTGGCATACAGGATAACATGTT
ATGAAGGTTTCGATCCAACTGGTGGAGTTTCAgatgaaaagaaattaaaa
CTAGAAGACAAATACAAAGTGGAAGATTGTAAATACCGCACACAAGAACA
TGACATAATACACTGGCATTACAAAGGAATGCTACTCAACGGTAAAAACT
TTGGTGAAGGAAATTACCATGCACAACTGGGCCACCGTACTATCATATAT
GGTGTAGACCAAGGAATGAGGGGTTTGTGTGTTGGTGAAAAACGTAGAAT
GACAATGCACCCTGATTGGGGATACGGAACAAGTGGGACTGCTAGAAGAC
AAATACAAAGTGGAAGATTGTAAATACCGCACACAAGAACATGACATAAT
ACACTGGCATTACAAAGGAATGCTACTCAACGGTAAAAACTTTGGTGAAG
GAAATTACCATGCACAACTGGGCCACCGTACTATCATATATGGTGTAGAC
CAAGGAATGAGGGGTTTGTGTGTTGGTGAAAAACGTAGAATGACAATGCA
CCCTGATTGGGGATACGGAACAAGTGGGACTGACAACATCCCACCAAATT
CAGTACTTGTGTTTGATGTACACCTTCTGAAAGTTGAAAGACCTGGTGAT
GGTGTCGAGACTCTAGATGAAAAGTTTGAACAAAATGGTGGCGTGACTGC
TGAAAATAAACTTGTGACAACATCCCACCAAATTCAGTACTTGTGTTTGA
TGTACACCTTCTGAAAGTTGAAAGACCTGGTGATGGTGTCGAGACTCTAG
ATGAAAAGTTTGAACAAAATGGTGGCGTGACTGCTGAAAATAAACTTGTG
CTCAAAGACTTGTACAAGAAAGATCCTGAACTCTGTAAAATGTCATCTGG
TCAGGACGATTTGATTTATTGGAATTACAAAGGGAAACTTTTAGACGGCC
ATGTTTTCGATCAAGGAAAATTTCACGCCAAACTTGGACACGGTCAGGTT
ATCACAGGCGTCGACAAGGCAATGCTTGGTTTGTGTGTCGGAGAGAAGAG
GCGTATGTTTATCCACCCTGATTGGGCGTACGGAGCGCGGGGCGTTTCTG
GAACAATCCCGCCTAATTCTATACTCATCTTTGACGTTGAGTTGTTGAGT
ATTGAAAAACCTGACGGACGTAGAGACGAGATTGATAAACATCAGGAGTT
TTCGAAAAAAGCTGACCCTGATCATGAAAAATTAAAGCTCAAAGACTTGT
ACAAGAAAGATCCTGAACTCTGTAAAATGTCATCTGGTCAGGACGATTTG
ATTTATTGGAATTACAAAGGGAAACTTTTAGACGGCCATGTTTTCGATCA
AGGAAAATTTCACGCCAAACTTGGACACGGTCAGGTTATCACAGGCGTCG
ACAAGGCAATGCTTGGTTTGTGTGTCGGAGAGAAGAGGCGTATGTTTATC
CACCCTGATTGGGCGTACGGAGCGCGGGGCGTTTCTGGAACAATCCCGCC
TAATTCTATACTCATCTTTGACGTTGAGTTGTTGAGTATTGAAAAACCTG
ACGGACGTAGAGACGAGATTGATAAACATCAGGAGTTTTCGAAAAAAGCT
GACCCTGATCATGAAAAATTAAAGatCGAAGTGACTTATACGGTAGACAG
TGACAAATGTGACAAACAGACACGTAAAGGGGACACCATTAAATGGCACT
ACATTGGAACGTTCACTGACGGTACTGAATTTCATTCTGGAAACTACACA
GCTAAACTCGGACACAGACAAGTTATAACGGGCGTCGATCGTGGTATGTT
GAATATGTGTGTGGGCGAGAAAAGGCGTCTGACGATACACCCAGATTGGG
CTTACGGTAAATCAGGGCGTGAAGGTTCAATTCCGCCCAATGCCACCCTG
ATATTCGACGTggaactttttgaaattgacaGACCTGAAGATGAGAAGGA
AGAACTGtagatCGAAGTGACTTATACGGTAGACAGTGACAAATGTGACA
AACAGACACGTAAAGGGGACACCATTAAATGGCACTACATTGGAACGTTC
ACTGACGGTACTGAATTTCATTCTGGAAACTACACAGCTAAACTCGGACA
CAGACAAGTTATAACGGGCGTCGATCGTGGTATGTTGAATATGTGTGTGG
GCGAGAAAAGGCGTCTGACGATACACCCAGATTGGGCTTACGGTAAATCA
GGGCGTGAAGGTTCAATTCCGCCCAATGCCACCCTGATATTCGACGTgga
actttttgaaattgacaGACCTGAAGATGAGAAGGAAGAACTGtag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000401_pilon | genome | sc0000401_pilon:49998..56721 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 913-1248:6389 |
| Aaloc | 526-912:4114 |
| Aaloc | 394-525:2522 |
| Aaloc | 151-390:1892 |
| Aaloc | 1-150:1 |
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