XLOC_009180.9 (mRNA) -

Overview
NameXLOC_009180.9
Unique NameXLOC_009180.9
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000691_pilon:17715..19053+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009180.9 ID=XLOC_009180.9|Name=XLOC_009180.9|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1339bp|location=Sequence derived from alignment at sc0000691_pilon:17715..19053+ (Clytia hemisphaerica_ch_hm2_pilon)
CTATCATTAATccacataacatcaaaaaccTCTACTACCTTTGTGATCAC TGTGCTAATGAGAACCTCCCAAAGAGCGAAGcaggaaagaagaaaaacaa aagacagAGAGACCTTAATAACCTTGTCAAGCCAATACCAATGGCAGGCA AACAAGATGAGGATGACAATATGAGTGATCCAATCCTGAGTGATAAAGAC AACTCAGAGTCAAATGAGACAATTGAAATAAGTGACAATTTGACGGACCA AAATCGACAGATATCCAAAACCTGTGCGCACTATGTAAAAGGAAAATGCA AGTACGGAATAAAGGGAAGAGACTGCAAGTTCGACCATCCAAAAGCATGT CGAAAATTCATGAAGCACGGAACCAGAGCCAGAGTTGGCTGTCAAAAAGG TAGAAACTGTCtcttttttcacccaaaaatgtGCATTGATTCACTGAGGA AAGGAGAATGTTTCAATAAGATGTGTCAGCTAACACAtgtaaaaggaaca aaaagaaaTGCCGAAACCTACccacagagagagagagaatatcaaaacaa atgggATGTCAAAGAAAATCAGTACCAAAATGATTTTAAGGAACAACACT ATCAGCATGACAACAGGGAGTATGGATCTCAAGAAACCCATCAAAGGAAT AACCAGAATACAAACAAAGAAATGgattttttagctatttttcaaaaatt caaaaaagacttAATACTGGAGATCGATCAGAAAATATCCACACTGATGG ACAAACAAGTGAGGAAGGAAATACCACTACAATACCAGTATCCTCAACGA ATGATGTCCCCTCAGAACACCAACTGGGGAATAAACCCGTCAATGATCAA CCCGTCTCgctaaattcattttcaattttaaacgtTCAAGGACTTAAACC ACAAACAGTTCAATCAACAGTACCATATATCAAAGACAAGTTGAttgaga ataactttttatttatgattttaacaGAAACTTGGCTCAAAGACCATAAT GATGCTGAGTTACACATAGAAGGCTATGAAATATTTCGGTCCGACAGAAA AAGACCAAAGTCACGATTTGGAAGATGTAGTGGTGGTGTCGCTATATACA TGAGAGAAGATATTTCATCACACTTCAAACAGACCGTTACACACTCAAAT GGCGTTATCGAAGTCATCTGTCTGAGTTCGACTACATTGGATATCCAAAT ATGGGGAATATACCGACAGCCAGACGACTCATCAAACGGGAATCCATCTA AGAATGAACAATTCAAACCAGTTATAGAGTTAATTAAATCAGAACTAGAC AAAACTGAAGGAAAAACACCAGACATCTTCATAGCAGGT

Coding sequence (CDS) from alignment at sc0000691_pilon:17715..19053+

>XLOC_009180.9 ID=XLOC_009180.9|Name=XLOC_009180.9|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000691_pilon:17715..19053+ (Clytia hemisphaerica_ch_hm2_pilon)
CTATCATTAATccacataacatcaaaaaccTCTACTACCTTTGTGATCAC
TGTGCTAATGAGAACCTCCTATCATTAATccacataacatcaaaaaccTC
TACTACCTTTGTGATCACTGTGCTAATGAGAACCTCAAAAAGACCAAAGT
CACGATTTGGAAGATGTAGTGGTGGTGTCGCTATATACATGAGAGAAGAT
ATTTCATCACACTTCAAACAGACCGTTACACACTCAAATGGCGTTATCGA
AGTCATCTGTCTGAGTTCGACTACATTGGATATCCAAATATGGGGAATAT
ACCGACAGCCAGACGACTCATCAAACGGGAATCCATCTAAGAATGAACAA
TTCAAACCAGTTATAGAGTTAATTAAATCAGAACTAGACAAAACTGAAGG
AAAAACACCAGACATCTTCATAGCAGGTAAAAAGACCAAAGTCACGATTT
GGAAGATGTAGTGGTGGTGTCGCTATATACATGAGAGAAGATATTTCATC
ACACTTCAAACAGACCGTTACACACTCAAATGGCGTTATCGAAGTCATCT
GTCTGAGTTCGACTACATTGGATATCCAAATATGGGGAATATACCGACAG
CCAGACGACTCATCAAACGGGAATCCATCTAAGAATGAACAATTCAAACC
AGTTATAGAGTTAATTAAATCAGAACTAGACAAAACTGAAGGAAAAACAC
CAGACATCTTCATAGCAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_009180.9XLOC_009180.9-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000691_pilongenomesc0000691_pilon:17715..19053 +
Properties
Property NameValue
Aaloc70-360:1049
Aaloc1-66:1