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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000441_pilon:161069..163759+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008932 ID=XLOC_008932|Name=XLOC_008932|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2691bp|location=Sequence derived from alignment at sc0000441_pilon:161069..163759+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAACAAGCATCATGGCAGTGGATACTGTGCTCGAAAATATTGCACC
TGGCCAGTCTGAAAGGTTGAAACAAGAATTTTCAGGACAGGCCGCAAAAT
CATTCAACCTACTAACCACACAAGCTCTTCAAGACGCGGTTACCGCAGCC
AATAGCTCTAATGTCAAAGTTCAACTTTTATCGATACTTTGTGGAAAGGA
TGAAAATGGTGATTACAAGATGACAATTGCTGAGATGCTCTCCATGTTTC
CAAGCGTTaaaaaaaaaCCAGATTGAAAAAGCAAGAAAACATGCATCGCT
TGGACAAGCTGGTATAACCCTAGAGCCTGGCAAATATTACCGCAACAAAC
TGACAAATCACCAGATCAATcactttcttgattttattcaatttaGTGGT
TTGATTCAAGACGTTGCCAGTGGGACAAGACAAGTTTAACTATCAACAAA
GAAAACAGTTGCAATGCCAAACGTCATTAGAACTGTGCACAAGGCTGAGG
TTATCAGGCTGTATGAAGGTACATGTGACAGTGAAGGATATGATAAAGAA
TCTAGCAGACCGTCGACAAGGACTCTATGGAACATTCTTCAAAGTTGTCC
TGCCAGTCAGAGAAAAAGTTTAGCTGGTTTAGACAACGTGGCAGCTGAGG
GATCGGATTCGTTTGACCTTATCATAACCGTAATACAGTTTTTGGTTTCT
AAATCTCCTGCTATCAAAGAGACTGTAGACCAAgttattgaaaaattaac
tgCTGGAAGAGGATACTTGAAAGGGGAGTATAAAGCTAATTGTTCAAATG
AAAATGGTTCTGAAGTTCCTGACCATTGTAGATATCATGCTCTTTCCGAC
CCCAAAGAACCACTATTTCAACGAAAGTGTAATCATGCCCACACGAGTTA
CTGCAATGACTGTGAAAATCTAAAAGAAGCTTTGAAGCAGGCACTTGCTG
TCGTTACACAGAATCAAGATCTCGCaactaaagaaagaaagaacttCATT
TACGATGTTGAACAAGCaatcaaaaacatagaaatgtgAAACCGCACATC
TTAACTGTAGTTCATCAAGAGGGTCAAAAGACTGACTTGCTCCAGGAGTT
AGATAATCAAACAGCATTCATCATAATTGATTTCACCATGACATTCCTGT
CTCGGCGTTACCGAGAATCTATGGCAAAATGGTTTGGGAAAGCAGGAAAT
GGTGTGCATGTGACCTGCTGCATCTTCTTCAAAGGACCTGATGGAAATCT
CATAAAGAGGACATACATCGTGTTTATTGGAAAGGCTGCACAAGACGTGG
CTGCTGTAATGTCAATCTACGCTGCATGCCTCAAGCAGGTTAAAAAGGAT
TAAAAAGGATGCACCACACATCACCAAGCTAGTGGATAAATCAGACAACG
CAGGCTGCTATCGCACGGAAGTACTCTTCGCCTGGAAGTATCACTGGCCA
CCAAAAAATGTGGGAATGCAGTTCATTGAAACCATGTTTAATGAAAGACA
GGCAGGAAAGGACCAGTGTGACCGTGATAGCGCTACAGCAAAGAGGCAGA
TGAATTTTTACATAAAGCAAGGGAAAAACATCTAAACTGCTGAGCAAATG
AATGATGCATTGAGGACAGCGACAGCTTTATGTGGTTTCAATAGCATGGT
GATGGAGatcaatgaaaagaagaaatacGAAAATGAAAAGAACATCAAAG
ACGTCAGCAAAATCCACCATGTCAAATATGTTGTTGATGGTAATGATCGA
CAGTATCATGTTTGGCAGTACTACGGTATTGGAAAAGGAAGATTATTCAA
TGTTGGAAAGGAACCTCCGATCCTAAAGAACATAATCAAAGTACCGTTTG
AAAGTAATCATCTATCTTACGGAAAGGCATCCAAGACTTCAAAGAAGGAG
ATTATTTATTGTTCAGAGCCCATGTGtgtcaaatcattttcatcagtGGA
CTTGATGCTGAAACACCTGAATTATGGCAAACATGAATACCAGTCAACAA
AGGCATCTCAAATGGATAGGGTGAAAGATCAATGGGTGCAGCGATTCATT
GATGGTGGTTCTAAAACTCTACCTGGTGGAAACCCAACCATGGCTTTTAC
AAGCTTTCAGAGTGATCTACTTTCAATGGGATGGGCTATTCCTAAGCGCT
CCTTTAGAAGGTGAGGATTCGTTTTTCTCCAAGTTCAAAGCTACTAGATT
GATTAAAAGATACTATTTCAATTAAATAATGGTGTAATTTTATCATGCTC
GCTATGTCATCTATTATCATTCCATTTATGAACAATGGTGACCAATAGCA
ATCACTTTTCCATTTACAGGTTAACAAAGGAGCAAAAGGCTTTTTTGGAC
CAAATCTTTGACGAAGGTGAACGTAAGGGATCAAAAGCAACACCTGAAGC
AACATTATCTTTGATGAAAACAAAGTTTGAAGGTACcaaaataaataaca
aacaaTCTGAATGACTTATGGAAAGTTTTTACCAAGCATTTCTTTGTAAT
ATGTATTAAGTTTGTTTGAACGTTTTGCTAAAACCAAAATCACTTTTAGG
ATAGAAAATCTTTGATGTAGTTTCTAGCTAAAGATCTTGCCAATTTGCTC
ATTTTTAGTGAAAGACTATCTTCCAGTTAGCACCATCAAATCATACTTTA
GCAGACGAGCTAAGAAGATTCGGAATGGTCAGCTCAAGATG Coding sequence (CDS) from alignment at sc0000441_pilon:161069..163759+ >XLOC_008932 ID=XLOC_008932|Name=XLOC_008932|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4712bp|location=Sequence derived from alignment at sc0000441_pilon:161069..163759+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAACAAGCATCATGGCAGTGGATACTGTGCTCGAAAATATTGCACC
TGGCCAGTCTGAAAGGTTGAAACAAGAATTTTCAGGACAGGCCGCAAAAT
CATTCAACCTACTAACCACACAAGCTCTTCAAGACGCGGTTACCGCAGCC
AATAGCTCTAATGTCAAAGTTCAACTTTTATCGATACTTTGTGGAAAGGA
TGAAAATGGTGATTACAAGATGACAATTGCTGAGATGCTCTCCATGTTTC
CAAGCGTTaaaaaaaaaCCAGATTGAAAAAGCAAGAAAACATGCATCGCT
TGGACAAGCTGGTATAACCCTAGAGCCTGGCAAATATTACCGCAACAAAC
TGACAAATCACCAGATCAATcactttcttgattttattcaatttaGTGGT
TTGATTCAAGACGTTGCCAGTGGGACAAGACAAGTTTAACTATCAACAAA
GAAAACAGTTGCAATGCCAAACGTCATTAGAACTGTGCACAAGGCTGAGG
TTATCAGGCTGTATGAAGGTACATGTGACAGTGAAGGATATGATAAAGAA
TCTAGCAGACCGTCGACAAGGACTCTATGGAACATTCTTCAAAGTTGTCC
TGCCAGTCAGAGAAAAAGTTTAGCTGGTTTAGACAACGTGGCAGCTGAGG
GATCGGATTCGTTTGACCTTATCATAACCGTAATACAGTTTTTGGTTTCT
AAATCTCCTGCTATCAAAGAGACTGTAGACCAAgttattgaaaaattaac
tgCTGGAAGAGGATACTTGAAAGGGGAGTATAAAGCTAATTGTTCAAATG
AAAATGGTTCTGAAGTTCCTGACCATTGTAGATATCATGCTCTTTCCGAC
CCCAAAGAACCACTATTTCAACGAAAGTGTAATCATGCCCACACGAGTTA
CTGCAATGACTGTGAAAATCTAAAAGAAGCTTTGAAGCAGGCACTTGCTG
TCGTTACACAGAATCAAGATCTCGCaactaaagaaagaaagaacttCATT
TACGATGTTGAACAAGCaatcaaaaacatagaaatgtgAAACCGCACATC
TTAACTGTAGTTCATCAAGAGGGTCAAAAGACTGACTTGCTCCAGGAGTT
AGATAATCAAACAGCATTCATCATAATTGATTTCACCATGACATTCCTGT
CTCGGCGTTACCGAGAATCTATGGCAAAATGGTTTGGGAAAGCAGGAAAT
GGTGTGCATGTGACCTGCTGCATCTTCTTCAAAGGACCTGATGGAAATCT
CATAAAGAGGACATACATCGTGTTTATTGGAAAGGCTGCACAAGACGTGG
CTGCTGTAATGTCAATCTACGCTGCATGCCTCAAGCAGGTTAAAAAGGAT
TAAAAAGGATGCACCACACATCACCAAGCTAGTGGATAAATCAGACAACG
CAGGCTGCTATCGCACGGAAGTACTCTTCGCCTGGAAGTATCACTGGCCA
CCAAAAAATGTGGGAATGCAGTTCATTGAAACCATGTTTAATGAAAGACA
GGCAGGAAAGGACCAGTGTGACCGTGATAGCGCTACAGCAAAGAGGCAGA
TGAATTTTTACATAAAGCAAGGGAAAAACATCTAAACTGCTGAGCAAATG
AATGATGCATTGAGGACAGCGACAGCTTTATGTGGTTTCAATAGCATGGT
GATGGAGatcaatgaaaagaagaaatacGAAAATGAAAAGAACATCAAAG
ACGTCAGCAAAATCCACCATGTCAAATATGTTGTTGATGGTAATGATCGA
CAGTATCATGTTTGGCAGTACTACGGTATTGGAAAAGGAAGATTATTCAA
TGTTGGAAAGGAACCTCCGATCCTAAAGAACATAATCAAAGTACCGTTTG
AAAGTAATCATCTATCTTACGGAAAGGCATCCAAGACTTCAAAGAAGGAG
ATTATTTATTGTTCAGAGCCCATGTGtgtcaaatcattttcatcagtGGA
CTTGATGCTGAAACACCTGAATTATGGCAAACATGAATACCAGTCAACAA
AGGCATCTCAAATGGATAGGGTGAAAGATCAATGGGTGCAGCGATTCATT
GATGGTGGTTCTAAAACTCTACCTGGTGGAAACCCAACCATGGCTTTTAC
AAGCTTTCAGAGTGATCTACTTTCAATGGGATGGGCTATTCCTAAGCGCT
CCTTTAGAAGATGAGAACAAGCATCATGGCAGTGGATACTGTGCTCGAAA
ATATTGCACCTGGCCAGTCTGAAAGGTTGAAACAAGAATTTTCAGGACAG
GCCGCAAAATCATTCAACCTACTAACCACACAAGCTCTTCAAGACGCGGT
TACCGCAGCCAATAGCTCTAATGTCAAAGTTCAACTTTTATCGATACTTT
GTGGAAAGGATGAAAATGGTGATTACAAGATGACAATTGCTGAGATGCTC
TCCATGTTTCCAAGCGTTaaaaaaaaaCCAGATTGAAAAAGCAAGAAAAC
ATGCATCGCTTGGACAAGCTGGTATAACCCTAGAGCCTGGCAAATATTAC
CGCAACAAACTGACAAATCACCAGATCAATcactttcttgattttattca
atttaGTGGTTTGATTCAAGACGTTGCCAGTGGGACAAGACAAGTTTAAC
TATCAACAAAGAAAACAGTTGCAATGCCAAACGTCATTAGAACTGTGCAC
AAGGCTGAGGTTATCAGGCTGTATGAAGGTACATGTGACAGTGAAGGATA
TGATAAAGAATCTAGCAGACCGTCGACAAGGACTCTATGGAACATTCTTC
AAAGTTGTCCTGCCAGTCAGAGAAAAAGTTTAGCTGGTTTAGACAACGTG
GCAGCTGAGGGATCGGATTCGTTTGACCTTATCATAACCGTAATACAGTT
TTTGGTTTCTAAATCTCCTGCTATCAAAGAGACTGTAGACCAAgttattg
aaaaattaactgCTGGAAGAGGATACTTGAAAGGGGAGTATAAAGCTAAT
TGTTCAAATGAAAATGGTTCTGAAGTTCCTGACCATTGTAGATATCATGC
TCTTTCCGACCCCAAAGAACCACTATTTCAACGAAAGTGTAATCATGCCC
ACACGAGTTACTGCAATGACTGTGAAAATCTAAAAGAAGCTTTGAAGCAG
GCACTTGCTGTCGTTACACAGAATCAAGATCTCGCaactaaagaaagaaa
gaacttCATTTACGATGTTGAACAAGCaatcaaaaacatagaaatgtgAA
ACCGCACATCTTAACTGTAGTTCATCAAGAGGGTCAAAAGACTGACTTGC
TCCAGGAGTTAGATAATCAAACAGCATTCATCATAATTGATTTCACCATG
ACATTCCTGTCTCGGCGTTACCGAGAATCTATGGCAAAATGGTTTGGGAA
AGCAGGAAATGGTGTGCATGTGACCTGCTGCATCTTCTTCAAAGGACCTG
ATGGAAATCTCATAAAGAGGACATACATCGTGTTTATTGGAAAGGCTGCA
CAAGACGTGGCTGCTGTAATGTCAATCTACGCTGCATGCCTCAAGCAGGT
TAAAAAGGATTAAAAAGGATGCACCACACATCACCAAGCTAGTGGATAAA
TCAGACAACGCAGGCTGCTATCGCACGGAAGTACTCTTCGCCTGGAAGTA
TCACTGGCCACCAAAAAATGTGGGAATGCAGTTCATTGAAACCATGTTTA
ATGAAAGACAGGCAGGAAAGGACCAGTGTGACCGTGATAGCGCTACAGCA
AAGAGGCAGATGAATTTTTACATAAAGCAAGGGAAAAACATCTAAACTGC
TGAGCAAATGAATGATGCATTGAGGACAGCGACAGCTTTATGTGGTTTCA
ATAGCATGGTGATGGAGatcaatgaaaagaagaaatacGAAAATGAAAAG
AACATCAAAGACGTCAGCAAAATCCACCATGTCAAATATGTTGTTGATGG
TAATGATCGACAGTATCATGTTTGGCAGTACTACGGTATTGGAAAAGGAA
GATTATTCAATGTTGGAAAGGAACCTCCGATCCTAAAGAACATAATCAAA
GTACCGTTTGAAAGTAATCATCTATCTTACGGAAAGGCATCCAAGACTTC
AAAGAAGGAGATTATTTATTGTTCAGAGCCCATGTGtgtcaaatcatttt
catcagtGGACTTGATGCTGAAACACCTGAATTATGGCAAACATGAATAC
CAGTCAACAAAGGCATCTCAAATGGATAGGGTGAAAGATCAATGGGTGCA
GCGATTCATTGATGGTGGTTCTAAAACTCTACCTGGTGGAAACCCAACCA
TGGCTTTTACAAGCTTTCAGAGTGATCTACTTTCAATGGGATGGGCTATT
CCTAAGCGCTCCTTTAGAAGGTTAACAAAGGAGCAAAAGGCTTTTTTGGA
CCAAATCTTTGACGAAGGTGAACGTAAGGGATCAAAAGCAACACCTGAAG
CAACATTATCTTTGATGAAAACAAAGTTTGAAGGTTAACAAAGGAGCAAA
AGGCTTTTTTGGACCAAATCTTTGACGAAGGTGAACGTAAGGGATCAAAA
GCAACACCTGAAGCAACATTATCTTTGATGAAAACAAAGTTTGAAGTGAA
AGACTATCTTCCAGTTAGCACCATCAAATCATACTTTAGCAGACGAGCTA
AGAAGATTCGGAATGGTCAGCTCAAGATGTGAAAGACTATCTTCCAGTTA
GCACCATCAAATCATACTTTAGCAGACGAGCTAAGAAGATTCGGAATGGT
CAGCTCAAGATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000441_pilon | genome | sc0000441_pilon:161069..163759 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2269-2349:2611 |
| Aaloc | 2155-2265:2321 |
| Aaloc | 1747-2151:1754 |
| Aaloc | 1363-1740:1376 |
| Aaloc | 1348-1362:1356 |
| Aaloc | 1225-1347:1228 |
| Aaloc | 1039-1224:1039 |
| Aaloc | 259-1035:260 |
| Aaloc | 1-258:1 |
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