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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000441_pilon:159410..163163+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008919 ID=XLOC_008919|Name=XLOC_008919|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3754bp|location=Sequence derived from alignment at sc0000441_pilon:159410..163163+ (Clytia hemisphaerica_ch_hm2_pilon)
CACAAACTTGTGATCGACATTTTCATTCACTACTACTTGTCTCATAATCA
AACAATCAATGTATATTGATCTTCAAAATCATTTACTGCTTTTAGATGGG
TCTTTTTCAGCCCAACAAGCCTCTTTCAATATTACATACATCATCATATG
CAACCTCATAAATCGAAGTAAATAACTCATTTAAGTCTTAAGTTCTTGCA
GAAAAAGGGAAAATGTAAAATATCTATAGGTGAAAGTTCTGTATTTAACA
AACTTTACTGATAGATAACTTTATGGTTTTTGAACTTTAGACTGTTTTGC
AAAGACAGATTTGAAGCTCTAAAGCAaaggaacattttttgaaattttat
tattattgccaatttggtaaatttattttcagtttcactGCCAACTTGGT
AGAAATCGGACATAATGGCCAAAAACAATTCACACTTGAAAACCACAAAA
CCACAGAAGAAGATCGCCAGAAAGTGACAACTGTTATTGTAATTCATGAC
caggtttgtttgttttttctctcttttgatGTGTAAAAAACTGGGTATTG
TATTAATCACATATGCTGTATACACTCTTTTTCAATAAGATCAATTTTTA
TAAAGACACCAAGGCTCAAAATACcataaaaatccataaaatagGAACAT
GATAATAACAATCTGAGACTGAAAGAGTGCAAATAATAATATCATCGACA
AACCTTTCACTAGTTCtaattaaattttattaataaaatattGTCTTCCT
TTGGCAGAAATTCAAATGGCGGAAAACAAGAGCAAAAAGAAGAAGATCTC
TTGTTTCATTGGGGAGCGTCTTTCGGAGGAATGCAGCTtgaattggttta
aatgtactCTGCCTAGTGAGATGCAATTTTCACAATGTCAAGATGATATT
ACTTGCCATTTAACATCATTGGGATTACATAATGATAACTGTCCAAATGC
AAATGAGCAATGGCTGATCCTTTCCAGATCCAAAATAAACGCGATTCCTA
AGGAGGCTTTGATATGTCCTAAACACCGTTTCAAGTTTGGATTAGGATGG
CAACCACCAGCATCGTGTCAATATCCTGCTCATAAAGCTACCTCTTAGAA
GcatttaaaaagaagaaagatatcGATTCAAGCAACACTTGAATGTCACG
TCCTATTTAGCAATGCAATAACCTCTGTCACAGTTGCCATTGGTTCCAAA
TGGTGCAATAATTGTCGACTTTGTAGTCATCCTTCTTTGCTCAATCATAA
CAATGTAGACATATCAAATAAATGCTTACTGTGTACTGCAGATCACAGCC
ATCAAACTATTGTAGACACATCAAATGAAGCATATGAAATCAGCAGTCAG
AGAATTGATGACTTTCTTGATGACTTTAATCCAGCAGAAACCTTTCAGCC
ACCACAAACACGGAGTTCATCAACAATACCACCATTAGAGGAGACTGTTG
CAGATATGGAGGAGTCCTTTCAATCCAGTCAATGTAGCCAAGATGGTGGG
TCACAACTGTATACTTCAGATGATGAATACATAGAAGCAGGGAGCGAAAA
GGAAAACTTCAATAAATCTATGAGCAGTATGAAAGGTGATTGGACACCGG
TCAAATATCAGCTACACACAGATTTTGATTCAATAGACCCAAGGAGTCAG
CAGAGAGTCATGAGAACAAGCATCATGGCAGTGGATACTGTGCTCGAAAA
TATTGCACCTGGCCAGTCTGAAAGGTTGAAACAAGAATTTTCAGGACAGG
CCGCAAAATCATTCAACCTACTAACCACACAAGCTCTTCAAGACGCGGTT
ACCGCAGCCAATAGCTCTAATGTCAAAGTTCAACTTTTATCGATACTTTG
TGGAAAGGATGAAAATGGTGATTACAAGATGACAATTGCTGAGATGCTCT
CCATGTTTCCAAGCGTTaaaaaaaaaCCAGATTGAAAAAGCAAGAAAACA
TGCATCGCTTGGACAAGCTGGTATAACCCTAGAGCCTGGCAAATATTACC
GCAACAAACTGACAAATCACCAGATCAATcactttcttgattttattcaa
tttaGTGGTTTGATTCAAGACGTTGCCAGTGGGACAAGACAAGTTTAACT
ATCAACAAAGAAAACAGTTGCAATGCCAAACGTCATTAGAACTGTGCACA
AGGCTGAGGTTATCAGGCTGTATGAAGGTACATGTGACAGTGAAGGATAT
GATAAAGAATCTAGCAGACCGTCGACAAGGACTCTATGGAACATTCTTCA
AAGTTGTCCTGCCAGTCAGAGAAAAAGTTTAGCTGGTTTAGACAACGTGG
CAGCTGAGGGATCGGATTCGTTTGACCTTATCATAACCGTAATACAGTTT
TTGGTTTCTAAATCTCCTGCTATCAAAGAGACTGTAGACCAAgttattga
aaaattaactgCTGGAAGAGGATACTTGAAAGGGGAGTATAAAGCTAATT
GTTCAAATGAAAATGGTTCTGAAGTTCCTGACCATTGTAGATATCATGCT
CTTTCCGACCCCAAAGAACCACTATTTCAACGAAAGTGTAATCATGCCCA
CACGAGTTACTGCAATGACTGTGAAAATCTAAAAGAAGCTTTGAAGCAGG
CACTTGCTGTCGTTACACAGAATCAAGATCTCGCaactaaagaaagaaag
aacttCATTTACGATGTTGAACAAGCaatcaaaaacatagaaatgtgAAA
CCGCACATCTTAACTGTAGTTCATCAAGAGGGTCAAAAGACTGACTTGCT
CCAGGAGTTAGATAATCAAACAGCATTCATCATAATTGATTTCACCATGA
CATTCCTGTCTCGGCGTTACCGAGAATCTATGGCAAAATGGTTTGGGAAA
GCAGGAAATGGTGTGCATGTGACCTGCTGCATCTTCTTCAAAGGACCTGA
TGGAAATCTCATAAAGAGGACATACATCGTGTTTATTGGAAAGGCTGCAC
AAGACGTGGCTGCTGTAATGTCAATCTACGCTGCATGCCTCAAGCAGGTT
AAAAAGGATTAAAAAGGATGCACCACACATCACCAAGCTAGTGGATAAAT
CAGACAACGCAGGCTGCTATCGCACGGAAGTACTCTTCGCCTGGAAGTAT
CACTGGCCACCAAAAAATGTGGGAATGCAGTTCATTGAAACCATGTTTAA
TGAAAGACAGGCAGGAAAGGACCAGTGTGACCGTGATAGCGCTACAGCAA
AGAGGCAGATGAATTTTTACATAAAGCAAGGGAAAAACATCTAAACTGCT
GAGCAAATGAATGATGCATTGAGGACAGCGACAGCTTTATGTGGTTTCAA
TAGCATGGTGATGGAGatcaatgaaaagaagaaatacGAAAATGAAAAGA
ACATCAAAGACGTCAGCAAAATCCACCATGTCAAATATGTTGTTGATGGT
AATGATCGACAGTATCATGTTTGGCAGTACTACGGTATTGGAAAAGGAAG
ATTATTCAATGTTGGAAAGGAACCTCCGATCCTAAAGAACATAATCAAAG
TACCGTTTGAAAGTAATCATCTATCTTACGGAAAGGCATCCAAGACTTCA
AAGAAGGAGATTATTTATTGTTCAGAGCCCATGTGtgtcaaatcattttc
atcagtGGACTTGATGCTGAAACACCTGAATTATGGCAAACATGAATACC
AGTCAACAAAGGCATCTCAAATGGATAGGGTGAAAGATCAATGGGTGCAG
CGATTCATTGATGGTGGTTCTAAAACTCTACCTGGTGGAAACCCAACCAT
GGCT Coding sequence (CDS) from alignment at sc0000441_pilon:159410..163163+ >XLOC_008919 ID=XLOC_008919|Name=XLOC_008919|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000441_pilon:159410..163163+ (Clytia hemisphaerica_ch_hm2_pilon)
CACAAACTTGTGATCGACATTTTCATTCACTACACAAACTTGTGATCGAC
ATTTTCATTCACTAtcaatttaGTGGTTTGATTCAAGACGTTGCCAGTGG
GACAAGACAAGTTTAACTATCAACAAAGAAAACAGTTGCAATGCCAAACG
TCATTAGAACTGTGCACAAGGCTGAGGTTATCAGGCTGTATGAAGGTACA
TGTGACAGTGAAGGATATGATAAAGAATCTAGCAGACCGTCGACAAGGAC
TCTATGGAACATTCTTCAAAGTTGTCCTGCCAGTCAGAGAAAAAGTTTAG
CTGGTTTAGACAACGTGGCAGCTGAGGGATCGGATTCGTTTGACCTTATC
ATAACCGTAATACAGTTTTTGGTTTCTAAATCTCCTGCTATCAAAGAGAC
TGTAGACCAAgttattgaaaaattaactgCTGGAAGAGGATACTTGAAAG
GGGAGTATAAAGCTAATTGTTCAAATGAAAATGGTTCTGAAGTTCCTGAC
CATTGTAGATATCATGCTCTTTCCGACCCCAAAGAACCACTATTTCAACG
AAAGTGTAATCATGCCCACACGAGTTACTGCAATGACTGTGAAAATCTAA
AAGAAGCTTTGAAGCAGGCACTTGCTGTCGTTACACAGAATCAAGATCTC
GCaactaaagaaagaaagaacttCATTTACGATGTTGAACAAGCaatcaa
aaacatagaaatgtgAAACCGCACATCTTAACTGTAGTTCATCAAGAGGG
TCAAAAGACTGACTTGCTCCAGGAGTTAGATAATCAAACAGCATTCATCA
TAATTGATTTCACCATGACATTCCTGTCTCGGCGTTACCGAGAATCTATG
GCAAAATGGTTTGGGAAAGCAGGAAATGGTGTGCATGTGACCTGCTGCAT
CTTCTTCAAAGGACCTGATGGAAATCTCATAAAGAGGACATACATCGTGT
TTATTGGAAAGGCTGCACAAGACGTGGCTGCTGTAATGTCAATCTACGCT
GCATGCCTCAAGCAGGTTAAAAAGGATTAAAAAGGATGCACCACACATCA
CCAAGCTAGTGGATAAATCAGACAACGCAGGCTGCTATCGCACGGAAGTA
CTCTTCGCCTGGAAGTATCACTGGCCACCAAAAAATGTGGGAATGCAGTT
CATTGAAACCATGTTTAATGAAAGACAGGCAGGAAAGGACCAGTGTGACC
GTGATAGCGCTACAGCAAAGAGGCAGATGAATTTTTACATAAAGCAAGGG
AAAAACATCTAAACTGCTGAGCAAATGAATGATGCATTGAGGACAGCGAC
AGCTTTATGTGGTTTCAATAGCATGGTGATGGAGatcaatgaaaagaaga
aatacGAAAATGAAAAGAACATCAAAGACGTCAGCAAAATCCACCATGTC
AAATATGTTGTTGATGGTAATGATCGACAGTATCATGTTTGGCAGTACTA
CGGTATTGGAAAAGGAAGATTATTCAATGTTGGAAAGGAACCTCCGATCC
TAAAGAACATAATCAAAGTACCGTTTGAAAGTAATCATCTATCTTACGGA
AAGGCATCCAAGACTTCAAAGAAGGAGATTATTTATTGTTCAGAGCCCAT
GTGtgtcaaatcattttcatcagtGGACTTGATGCTGAAACACCTGAATT
ATGGCAAACATGAATACCAGTCAACAAAGGCATCTCAAATGGATAGGGTG
AAAGATCAATGGGTGCAGCGATTCATTGATGGTGGTTCTAAAACTCTACC
TGGTGGAAACCCAACCATGGCTtcaatttaGTGGTTTGATTCAAGACGTT
GCCAGTGGGACAAGACAAGTTTAACTATCAACAAAGAAAACAGTTGCAAT
GCCAAACGTCATTAGAACTGTGCACAAGGCTGAGGTTATCAGGCTGTATG
AAGGTACATGTGACAGTGAAGGATATGATAAAGAATCTAGCAGACCGTCG
ACAAGGACTCTATGGAACATTCTTCAAAGTTGTCCTGCCAGTCAGAGAAA
AAGTTTAGCTGGTTTAGACAACGTGGCAGCTGAGGGATCGGATTCGTTTG
ACCTTATCATAACCGTAATACAGTTTTTGGTTTCTAAATCTCCTGCTATC
AAAGAGACTGTAGACCAAgttattgaaaaattaactgCTGGAAGAGGATA
CTTGAAAGGGGAGTATAAAGCTAATTGTTCAAATGAAAATGGTTCTGAAG
TTCCTGACCATTGTAGATATCATGCTCTTTCCGACCCCAAAGAACCACTA
TTTCAACGAAAGTGTAATCATGCCCACACGAGTTACTGCAATGACTGTGA
AAATCTAAAAGAAGCTTTGAAGCAGGCACTTGCTGTCGTTACACAGAATC
AAGATCTCGCaactaaagaaagaaagaacttCATTTACGATGTTGAACAA
GCaatcaaaaacatagaaatgtgAAACCGCACATCTTAACTGTAGTTCAT
CAAGAGGGTCAAAAGACTGACTTGCTCCAGGAGTTAGATAATCAAACAGC
ATTCATCATAATTGATTTCACCATGACATTCCTGTCTCGGCGTTACCGAG
AATCTATGGCAAAATGGTTTGGGAAAGCAGGAAATGGTGTGCATGTGACC
TGCTGCATCTTCTTCAAAGGACCTGATGGAAATCTCATAAAGAGGACATA
CATCGTGTTTATTGGAAAGGCTGCACAAGACGTGGCTGCTGTAATGTCAA
TCTACGCTGCATGCCTCAAGCAGGTTAAAAAGGATTAAAAAGGATGCACC
ACACATCACCAAGCTAGTGGATAAATCAGACAACGCAGGCTGCTATCGCA
CGGAAGTACTCTTCGCCTGGAAGTATCACTGGCCACCAAAAAATGTGGGA
ATGCAGTTCATTGAAACCATGTTTAATGAAAGACAGGCAGGAAAGGACCA
GTGTGACCGTGATAGCGCTACAGCAAAGAGGCAGATGAATTTTTACATAA
AGCAAGGGAAAAACATCTAAACTGCTGAGCAAATGAATGATGCATTGAGG
ACAGCGACAGCTTTATGTGGTTTCAATAGCATGGTGATGGAGatcaatga
aaagaagaaatacGAAAATGAAAAGAACATCAAAGACGTCAGCAAAATCC
ACCATGTCAAATATGTTGTTGATGGTAATGATCGACAGTATCATGTTTGG
CAGTACTACGGTATTGGAAAAGGAAGATTATTCAATGTTGGAAAGGAACC
TCCGATCCTAAAGAACATAATCAAAGTACCGTTTGAAAGTAATCATCTAT
CTTACGGAAAGGCATCCAAGACTTCAAAGAAGGAGATTATTTATTGTTCA
GAGCCCATGTGtgtcaaatcattttcatcagtGGACTTGATGCTGAAACA
CCTGAATTATGGCAAACATGAATACCAGTCAACAAAGGCATCTCAAATGG
ATAGGGTGAAAGATCAATGGGTGCAGCGATTCATTGATGGTGGTTCTAAA
ACTCTACCTGGTGGAAACCCAACCATGGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000441_pilon | genome | sc0000441_pilon:159410..163163 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1396-1737:3413 |
| Aaloc | 1012-1389:3035 |
| Aaloc | 997-1011:3015 |
| Aaloc | 874-996:2887 |
| Aaloc | 688-873:2698 |
| Aaloc | 43-684:2054 |
| Aaloc | 34-39:2048 |
| Aaloc | 1-30:1 |
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