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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000349_pilon:108308..112937- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008852 ID=XLOC_008852|Name=XLOC_008852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4630bp|location=Sequence derived from alignment at sc0000349_pilon:108308..112937- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTACACAATCCTGTTGAATACCATCATGGACCCACCATGGAGAG
ACCATATTCAACACGTCACGAATCTTACTACTCAAGTCGACTCACAATGG
ATGATTCCGAAATTATCACACTTCATCCTCTAATCATTGGAAAAGACATT
GTTGTCTGTATGCCAGAAGTTAATAAAGTGTTACGTAATGTATACCAAGT
CTTATCACAAGCCAATTACTATTTATCTAAGCATGGGATTACATCTCGAC
GATATACAGGCGCCCAGTTGATCCGGATCAAAATGTTGGGCATTTTAGGA
CATGAAGCCAAAGTTTGTTCTTATATTTTGCAAAGAGATGCTGAGAGGAT
TTTCGATAGTTTTGACGTCAGTGGAGACAGCCGTAAATCCACCCGTATCC
AGTGGATGGAGCCCGTATTATTAGATGAAAAACCGATGCCTCAATCTACA
ACCCGTAGCAATTCATCCACGAATAGCAAGAACGATCAGCAGCAGGACGG
CCCGGTCAAAGTTCATCTTTTTAAACTGAATGACGATATTATAGTCTGTG
CACCTGAAGTTCAAAAAGTAGTCCAGTCTAATTTCCACCAAGGTGCAACA
GTCGGTTATTATTTCACCAAACTTGGTATTGTGCCTTACAAGTTTATCCA
TACATCACATCTAGATAAGATTAAGGAACTAGGAATTGTGAAGAAATGTG
CAGTCCATTGTACTTATATTTTGAAAGATGACGCATTAAGAGTTTTTGAA
GCATACGGTATGACACAAGATCAAATTGAAAACCATGTTGAATTCCTTGA
TGTGATGGTGTTAGCTGAAGGAACCTCCAGATCGTGGAAAAATAAGAAAG
AACGTTCATCACCGTCAACAAGTAGCCTAGAATCACCGCGCGGTGGAAAC
TGCTTATCACCAGCCAGTAACGTGTCTGACTACTCTGGCAAACATGACCT
AGAGACCGAGGATTATGCTCAAGCCTCTGATAAAGATATGACTGTTCATA
TTTTCATTGTCGAAGGAAACGAAGTTGTCTGCATGCCTGATATCCATAAA
ATTGTTCAAAATATCCACGGCAATTCCATCCAAGTCAATTACTACTTTAA
TAAACTCAAAGTTCAAAAACGCCGTTTTTGTTTTGCTCATTTACGTGAAC
TAAAGAGTCGTAATATTTTACAGAACAATGCCACGTATTGTACGTACGTG
CCGAAATCAGATGCCGAGAAACTATTCCAGATTTACTGTTTGGTGGATGA
TCCAAAGTTGAAAGGAGTCCAATGGTCAGAACCAGTGAACTTGGATAACA
AAATCTCCAATTTAGCGTCACCGACACTATCAGAACCAGATACCAACGTT
TTTGATGACAACGAAAAAGAATTAGTGGTACATACGTTTACAATGGAAAA
TAGTACCGTGGTAATTACAGTTCCGGATGTTCACCGGGTTGTAGATTTCC
TTGATGAACAGAGCGCATCTCTTGATTACCATTTCCGGAAACTCGGTATC
GCGAAATGTCGCTTTACATACGCTCAACTCCATCAATTACGCCGCCTCAA
CGTCATTAAACGTCCAACCGTATGTACGTACATTGCCAAACATGATGTTA
ATCGCTTGTTGAAAATGTATGAGACCGAACGTAACAGACACCGGATGAAT
AAAGTCAAATTTTTACCACCGGTACAGCTAGTACGCGGAACTCCCCCTCA
ACAACAAACCGGAAACCCGAAATACATCAAACGTGAAAAATCACCTCCTA
AAATCAAAACTAACGGTCGACAGTCGCCATCGCCCACCAAGGTGATGTCC
CCCTACCACCAGCCCACGTCTCCTACCACTGAACGAGCACCTACCAGTTT
CACCAAGCCACCTACCTCCTCCCCACCCAACCCACACCAAGAAGAAGACA
TGCCATCCTCACACTCAGTCGCTATCACGCACATTCAAAGCATCCATCCA
ACCATTGATTGCCCGATTGTTATCCCGAACGGAGATTATGACCCGATGAA
AGCTGGTCGGGATAACGGTGAAAGCGATCGCAAAAGATCACATGAGAACC
CGGATTCACCTTCTAACAATAAAAAATTCAAATGTACGTAAAAGATTTGT
TAATTTAACAATTTTGTGCATAATGAATATGGATACTCTTAGGTGCCAAA
TAAACGCCCCCCCTGCTTGTTAATTTTTCGAAAGTTTTTCAACCCCCCGG
ACCTTATTAGGACCACCCCCTCTTTATTAATTATTACAAGAATATTTTCA
GTTGGCAAAAAGAAGTCCCTTATTTTGCTTTTACTTATGTACCATTTAAA
GTGCTTTCGCGGTCGTATTGGGTCTAATCATCAGCAAGATATCTGTTAAC
AACGTCATCTAATTCAAAATCAACCTTGTGTAATCGAACAGGCTACATCG
GTTATTTCAAAAAATTTTACTTTATTTTTTTAGTTGGAGATGCAACTTAT
GAAAGTTTGGTCCGAGAAAACTCACGCAAAGAAGATGAACTCAGAATTTT
GCATGGTATGTGATCTTGTCATTGATTTTATTCGACAATGATATTGTCCG
TAAAGATCAGTTAATATTCATGATATACACCCTCCCACTGGCCTATATTG
ACACCTTTTTAACTTTTAGCCGCTATCTCTGATCGGAGTTTCTACAAATT
GGCCCTTTCATGGTCGGAAAGGAATCATGGGTAGTCAATACCACCGTGCT
CTAATAACGACTTTTTATTGGCCAAAATTGCCGTTTTGGGAGCACAGTTA
GTCCTTATTACCCATGATTCATTTAAACCGTGAAATGGTCTGTGTTGCAT
GTGGTGGGTGTAGGTACATTTTCCCATCACATTTAGGCAGCACCAACATT
GAGAAGTGTCTTTTTCAAAGAATTCCTGTCAAAGATTTTATTTTGGTTGG
CTGGGATTTAGAAACTCACTCTAGGGTTTAGATAAATCTTAGTGTATTTA
CTACTAGAGGGTACAACTCATTTTTTTTCTGTTGTAGACGGTTATCAACG
TGAAATCAAGGATGAACGAAGTAAACGACAAACGGCCGAGCGAGTTTTAA
ACGAGTTGAAAGGTAAGAATGACGTAATCTTTCGGAAACACCAAAAAGCA
CCGCTATAAAATACAGTTTTAGTCGATATGATAAAGCTAAAGGTAGTCCG
AAAATCTATTTAAAATCCGGAGGCTGACTTTTTGAAAATGACGTCCTCAA
CAGGATGGAGCCGGATGAAGAATTTCCTTTTTTATTAATTCTAGATAATT
GTGGTCTTCTATTCATGATATTCATGACGTAATGTTTTCTACGGAAATAC
CCCGATTTTAGCCAGTAGTGGCAAATTTAAACTAGACAAAAGTTGTATAG
AATTTTCCACAACTGGCAAAAACCGGAGTCTTTCTGTAGAAAACATTACG
TCATGAATATCATGAATTGATAAGCTTTGTACCAAGACAGCTGTTCTCAA
AGCCGTTTTGATACTCTCATTTTTTCGACGTACAATGCAAAACCATTAAA
AAACAGGAAACGATAATGGGGACTATTAATACTAACTAAATGGGTTGTCA
AATTTATATATGTTTGTCTGACGCGAAGAAAATTTCTGGGTCACGAAACA
GACACTATCTCGCCAACGATTAGAATATTTTAGCTATTTCGGACATTAAA
TGAAGGCCCTAATAAAAATTTAGAAATCTCTTGAACGCTTCAAATTGTTC
ATTAACGTTCGCTAACCCAATGAAAGTTCTTAGAATTTATAAATCTAGTG
GCAACGAGGGATTGGATTTCTTACAGGGGAAGATTTTTGAGTCGTTTTTT
TATTCAATAGAAATCCTACCGGGGTCTATGGCAAAGAGGGTTTTGTGATA
TCCTACACTGAAAAAACAAGAGCACTATGTAACTATATATTATTTGAATC
TCTTTAGACCAACACAAACGAGAGATGACAGAACTACGAGAAGAATTACG
AAAATTGAAAGAGGAAAAGTTAGACAGCAAGTTGAAAATCTTCCATCGAG
GAAATGTGGATGATCATGATTCGCCTTTAAGTAATGGTAAGGTGTTTTCA
CCACAAGTTTTCACCCCGTCAGAACCTCCAGACAGCGTTCATCTAATGTT
CATAACCCCCTAATCTCATAACAGACCATCCATTTTACTTACCACGCTCT
GCTCTAAAGTGATATGGCGAATGTGTTGATTAGCTAAAACAATCAAAACC
ACGTTGTCTTTAACTTCGGAGCGAAAGCAAAAGGGGCTTGTTTCTAATGA
TTTTCTTTATGGTTGGCGATTGTTTTGCTTTAGATTTGCTTAAACCACCG
ATCTCTGAAACTTATGCAATATTCTTCTAAAGCCCGGATGAAAAAGATCA
GTGGCTCCGCTATTTTTTGCAGATTGTCTTTCGAAGCCATGTTTTTAAGA
GTGATAAAATGCCATGTACAGAGTATCAGAATGTGCTCGAAGACCAACCA
ATCGCATCTATATAAATGTTAGATAAAATTTATGTAAACTACTAGTTTCT
TTTACCCATTTGAAATGCGAGCCTACCTATTATACTACCACCATCGATAA
ATAACTGTGCATTTTTCCTTGTAACTTTTTGTAAAATTTTCTTTTTTTCT
TCATTATATGTAGGTTTCCATGAAGATTGA Coding sequence (CDS) from alignment at sc0000349_pilon:108308..112937- >XLOC_008852 ID=XLOC_008852|Name=XLOC_008852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4752bp|location=Sequence derived from alignment at sc0000349_pilon:108308..112937- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTACACAATCCTGTTGAATACCATCATGGACCCACCATGGAGAG
ACCATATTCAACACGTCACGAATCTTACTACTCAAGTCGACTCACAATGG
ATGATTCCGAAATTATCACACTTCATCCTCTAATCATTGGAAAAGACATT
GTTGTCTGTATGCCAGAAGTTAATAAAGTGTTACGTAATGTATACCAAGT
CTTATCACAAGCCAATTACTATTTATCTAAGCATGGGATTACATCTCGAC
GATATACAGGCGCCCAGTTGATCCGGATCAAAATGTTGGGCATTTTAGGA
CATGAAGCCAAAGTTTGTTCTTATATTTTGCAAAGAGATGCTGAGAGGAT
TTTCGATAGTTTTGACGTCAGTGGAGACAGCCGTAAATCCACCCGTATCC
AGTGGATGGAGCCCGTATTATTAGATGAAAAACCGATGCCTCAATCTACA
ACCCGTAGCAATTCATCCACGAATAGCAAGAACGATCAGCAGCAGGACGG
CCCGGTCAAAGTTCATCTTTTTAAACTGAATGACGATATTATAGTCTGTG
CACCTGAAGTTCAAAAAGTAGTCCAGTCTAATTTCCACCAAGGTGCAACA
GTCGGTTATTATTTCACCAAACTTGGTATTGTGCCTTACAAGTTTATCCA
TACATCACATCTAGATAAGATTAAGGAACTAGGAATTGTGAAGAAATGTG
CAGTCCATTGTACTTATATTTTGAAAGATGACGCATTAAGAGTTTTTGAA
GCATACGGTATGACACAAGATCAAATTGAAAACCATGTTGAATTCCTTGA
TGTGATGGTGTTAGCTGAAGGAACCTCCAGATCGTGGAAAAATAAGAAAG
AACGTTCATCACCGTCAACAAGTAGCCTAGAATCACCGCGCGGTGGAAAC
TGCTTATCACCAGCCAGTAACGTGTCTGACTACTCTGGCAAACATGACCT
AGAGACCGAGGATTATGCTCAAGCCTCTGATAAAGATATGACTGTTCATA
TTTTCATTGTCGAAGGAAACGAAGTTGTCTGCATGCCTGATATCCATAAA
ATTGTTCAAAATATCCACGGCAATTCCATCCAAGTCAATTACTACTTTAA
TAAACTCAAAGTTCAAAAACGCCGTTTTTGTTTTGCTCATTTACGTGAAC
TAAAGAGTCGTAATATTTTACAGAACAATGCCACGTATTGTACGTACGTG
CCGAAATCAGATGCCGAGAAACTATTCCAGATTTACTGTTTGGTGGATGA
TCCAAAGTTGAAAGGAGTCCAATGGTCAGAACCAGTGAACTTGGATAACA
AAATCTCCAATTTAGCGTCACCGACACTATCAGAACCAGATACCAACGTT
TTTGATGACAACGAAAAAGAATTAGTGGTACATACGTTTACAATGGAAAA
TAGTACCGTGGTAATTACAGTTCCGGATGTTCACCGGGTTGTAGATTTCC
TTGATGAACAGAGCGCATCTCTTGATTACCATTTCCGGAAACTCGGTATC
GCGAAATGTCGCTTTACATACGCTCAACTCCATCAATTACGCCGCCTCAA
CGTCATTAAACGTCCAACCGTATGTACGTACATTGCCAAACATGATGTTA
ATCGCTTGTTGAAAATGTATGAGACCGAACGTAACAGACACCGGATGAAT
AAAGTCAAATTTTTACCACCGGTACAGCTAGTACGCGGAACTCCCCCTCA
ACAACAAACCGGAAACCCGAAATACATCAAACGTGAAAAATCACCTCCTA
AAATCAAAACTAACGGTCGACAGTCGCCATCGCCCACCAAGGTGATGTCC
CCCTACCACCAGCCCACGTCTCCTACCACTGAACGAGCACCTACCAGTTT
CACCAAGCCACCTACCTCCTCCCCACCCAACCCACACCAAGAAGAAGACA
TGCCATCCTCACACTCAGTCGCTATCACGCACATTCAAAGCATCCATCCA
ACCATTGATTGCCCGATTGTTATCCCGAACGGAGATTATGACCCGATGAA
AGCTGGTCGGGATAACGGTGAAAGCGATCGCAAAAGATCACATGAGAACC
CGGATTCACCTTCTAACAATAAAAAATTCAAATATGGAAGTACACAATCC
TGTTGAATACCATCATGGACCCACCATGGAGAGACCATATTCAACACGTC
ACGAATCTTACTACTCAAGTCGACTCACAATGGATGATTCCGAAATTATC
ACACTTCATCCTCTAATCATTGGAAAAGACATTGTTGTCTGTATGCCAGA
AGTTAATAAAGTGTTACGTAATGTATACCAAGTCTTATCACAAGCCAATT
ACTATTTATCTAAGCATGGGATTACATCTCGACGATATACAGGCGCCCAG
TTGATCCGGATCAAAATGTTGGGCATTTTAGGACATGAAGCCAAAGTTTG
TTCTTATATTTTGCAAAGAGATGCTGAGAGGATTTTCGATAGTTTTGACG
TCAGTGGAGACAGCCGTAAATCCACCCGTATCCAGTGGATGGAGCCCGTA
TTATTAGATGAAAAACCGATGCCTCAATCTACAACCCGTAGCAATTCATC
CACGAATAGCAAGAACGATCAGCAGCAGGACGGCCCGGTCAAAGTTCATC
TTTTTAAACTGAATGACGATATTATAGTCTGTGCACCTGAAGTTCAAAAA
GTAGTCCAGTCTAATTTCCACCAAGGTGCAACAGTCGGTTATTATTTCAC
CAAACTTGGTATTGTGCCTTACAAGTTTATCCATACATCACATCTAGATA
AGATTAAGGAACTAGGAATTGTGAAGAAATGTGCAGTCCATTGTACTTAT
ATTTTGAAAGATGACGCATTAAGAGTTTTTGAAGCATACGGTATGACACA
AGATCAAATTGAAAACCATGTTGAATTCCTTGATGTGATGGTGTTAGCTG
AAGGAACCTCCAGATCGTGGAAAAATAAGAAAGAACGTTCATCACCGTCA
ACAAGTAGCCTAGAATCACCGCGCGGTGGAAACTGCTTATCACCAGCCAG
TAACGTGTCTGACTACTCTGGCAAACATGACCTAGAGACCGAGGATTATG
CTCAAGCCTCTGATAAAGATATGACTGTTCATATTTTCATTGTCGAAGGA
AACGAAGTTGTCTGCATGCCTGATATCCATAAAATTGTTCAAAATATCCA
CGGCAATTCCATCCAAGTCAATTACTACTTTAATAAACTCAAAGTTCAAA
AACGCCGTTTTTGTTTTGCTCATTTACGTGAACTAAAGAGTCGTAATATT
TTACAGAACAATGCCACGTATTGTACGTACGTGCCGAAATCAGATGCCGA
GAAACTATTCCAGATTTACTGTTTGGTGGATGATCCAAAGTTGAAAGGAG
TCCAATGGTCAGAACCAGTGAACTTGGATAACAAAATCTCCAATTTAGCG
TCACCGACACTATCAGAACCAGATACCAACGTTTTTGATGACAACGAAAA
AGAATTAGTGGTACATACGTTTACAATGGAAAATAGTACCGTGGTAATTA
CAGTTCCGGATGTTCACCGGGTTGTAGATTTCCTTGATGAACAGAGCGCA
TCTCTTGATTACCATTTCCGGAAACTCGGTATCGCGAAATGTCGCTTTAC
ATACGCTCAACTCCATCAATTACGCCGCCTCAACGTCATTAAACGTCCAA
CCGTATGTACGTACATTGCCAAACATGATGTTAATCGCTTGTTGAAAATG
TATGAGACCGAACGTAACAGACACCGGATGAATAAAGTCAAATTTTTACC
ACCGGTACAGCTAGTACGCGGAACTCCCCCTCAACAACAAACCGGAAACC
CGAAATACATCAAACGTGAAAAATCACCTCCTAAAATCAAAACTAACGGT
CGACAGTCGCCATCGCCCACCAAGGTGATGTCCCCCTACCACCAGCCCAC
GTCTCCTACCACTGAACGAGCACCTACCAGTTTCACCAAGCCACCTACCT
CCTCCCCACCCAACCCACACCAAGAAGAAGACATGCCATCCTCACACTCA
GTCGCTATCACGCACATTCAAAGCATCCATCCAACCATTGATTGCCCGAT
TGTTATCCCGAACGGAGATTATGACCCGATGAAAGCTGGTCGGGATAACG
GTGAAAGCGATCGCAAAAGATCACATGAGAACCCGGATTCACCTTCTAAC
AATAAAAAATTCAAATTTGGAGATGCAACTTATGAAAGTTTGGTCCGAGA
AAACTCACGCAAAGAAGATGAACTCAGAATTTTGCATGTTGGAGATGCAA
CTTATGAAAGTTTGGTCCGAGAAAACTCACGCAAAGAAGATGAACTCAGA
ATTTTGCATGACGGTTATCAACGTGAAATCAAGGATGAACGAAGTAAACG
ACAAACGGCCGAGCGAGTTTTAAACGAGTTGAAAGACGGTTATCAACGTG
AAATCAAGGATGAACGAAGTAAACGACAAACGGCCGAGCGAGTTTTAAAC
GAGTTGAAAGACCAACACAAACGAGAGATGACAGAACTACGAGAAGAATT
ACGAAAATTGAAAGAGGAAAAGTTAGACAGCAAGTTGAAAATCTTCCATC
GAGGAAATGTGGATGATCATGATTCGCCTTTAAGTAATGACCAACACAAA
CGAGAGATGACAGAACTACGAGAAGAATTACGAAAATTGAAAGAGGAAAA
GTTAGACAGCAAGTTGAAAATCTTCCATCGAGGAAATGTGGATGATCATG
ATTCGCCTTTAAGTAATGGTTTCCATGAAGATTGAGTTTCCATGAAGATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000349_pilon | genome | sc0000349_pilon:108308..112937 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2362-2376:16 |
| Aaloc | 2233-2358:722 |
| Aaloc | 2158-2229:1642 |
| Aaloc | 2086-2154:2196 |
| Aaloc | 1-2082:4631 |
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