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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000289_pilon:164108..168187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008843 ID=XLOC_008843|Name=XLOC_008843|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4080bp|location=Sequence derived from alignment at sc0000289_pilon:164108..168187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAAATATGAAAATGAAAATCTTTCCAAAACTTATAATTGGTATAAC
TATATGCTTTCTTATGATTGGCTTTGGTAATCTCAATCAAGAATTTTGTC
CAAGTTTGCAGTCTTCACGTGCAGATATCAATTCAGACTTCTCCAGCCAG
GGGATGTTCTTAAATGGTTTGTTGCATTTAATAAATCTTTAGCCATTCAG
GATTTCATGTTGAATAATTAAAAACTCCAGCATTAGAACAATGACACATT
AATGAATTATCATTTTTATTATCATGTTGTTGCTTTCATTTATCTTTATA
TTATCATTTTTACGTGCACTAATTTATTTCTTATCAATATTTTGATTCTA
GAGTTTTTAATATTCAAAATGACGTCTTGACTAGCAAAAGGTCTATTCTT
ACGTTACGTTATATATGTATGAAATTGAAGCCTGCCCGTGCTCTTTGAAG
TTTAAGAAGTTTTTTATGTAAGTTTAAGAAGTTTAACCTTTTTATGTAGA
GTCAAGTAACTCTAATTTAAATCTCTGTATTACAAATATTTCTAATTTGA
ATTAAAAAACTAGTCCCATCAGCTCTCACTATCCCTTTACTGTCCCTTTA
TAAATTTTTTTTTTTGACCAGGTCACTTAAAACCGTTTGGTTCTCACAGA
CCTGCAACAAAGGTTGAAAAGTTGAAATATATGATTTCGCCCGAAGATTT
CTATATGAATTTTGTTATCAAACACAAGCCTGTTCTATTTAAAGGTATTT
ATTTATTTATTTATTTATTTATCATTACATGATTTTTCTAAATAGAGGAA
ATCTTGCCATATTTGAGTGAATTTAAGCTAAAATCGTTTGCATGTTTAAG
GGTATTTTTCTTCACTTGACAAAATGTTATCAGGTGAAATTTTAGGGCAT
CTTGAGCCAAGGTTGTTTGAAAAAGTTCTTTCATATTGGGCTCTTCCAGA
AAATGTCCGTGCATGGGGGTGGTATATTGTCCGGGGTTAGCGAAAAATTA
TCAAAATTTACCTTAATTATTATTTGCTCTGTCCAGGGGTACTTTGTCCA
GGGGGTAAATCACTGAAAATTGTTATATCCTCCACCCCCCCCCCCCATAT
TCAATTTTTTTCTGGAAAAGCCCATTGGTAATTTTTTAAATACGCGTCAA
TTTATTTGAATTTCCATAAACTTTATTCAGGAGTAACAAAAAACTGGCCA
GCTTATACAAAATGGAATGATGAATATTTGAGGGATCATTATGGCGATAA
TGAAATGAACATGGAAACAAAAGATGATGATAAATACGATCTTCCAACAT
CAAGAACATTCAAAGATTTTCTGAACGTTTATAAAGATTCAAATATTTAT
ATGGTCGGTGAGGTAGTTACATGGAATATTCATTAAAAATAGAAAATGCT
ATATCATTTGTTATTTGTTTTCAGAAAAAATACACAATTTGCTTCACAGT
ACTTTAAGTTTCATGTTAATACAATCATCAGCTGTACAAGATCATATCAT
TGATATCATTTGTTATCTGTATACAAGAATCGAGAAATGGTTATATCAGT
TTTATGTGTGATTTTGTAATTCCAACATATTTAAATATCTCCAGGTCTTA
CCAGAGATGAGAGAAGACATTGTATTACCCCATTGTTTACGTTGTGAAGA
AATGGATCGCTTTTTCTTTGTTTCTTATTATTGGCATTCGAACGGTAAAA
CGATGTCAACGTTACATGTTGACACAGATGAAAATCTACTATGCGTCGTC
ACAGGTCATAAAAAGGTATTTATAGTATTTTTGTAAGATTTAGTATTGAT
AAAAAGAATCAGTAGTACTTACAATCATGGGCGTAATATTTGAGAAAAAG
GGAAATTCACTGCGAAGTTTTGAAACCACAATCGATTTGTAAGTGCTCTA
AAGTACGTTGGAAGCGTAGAGTTAACTCTGAGTTTTAACATGAGACTTTA
AGACTTGAACTGAGGATCCAAAAGTTCAAAAATGATCTAATAAGGATCAT
AATATAGCCTGGAAGTCTATAAACCTGAGCCAAATTGAAATATGCGATTA
AATTTAAGAGATGGCCCAAAATCGACTTTCTCGCCCGAATTCCAAATTTC
GAAAAACGAGGAAATAAGCTTAATTCTCAATAGATTTCGACCATGATTGT
ACAACGGAGTTTCGCTATATCGACGATAAAGTAAAAATTTTCATAAACTT
AAGAAACTTAGGGGTAAGAAGAAACTGTATTTTCAATTAACCCCTTGATG
TTCCTTAATGTTCGAACTAGATACATTTGAGTCTCCATGACACGAACCTC
AATAATAATTCGAATGCCCCTTAAACTCGAACAAGATAGCTATTCGCTTC
AGTTAACAATGCCTTATAAACCTGTCTTCAATAAAATATTAAGAACACAT
TAAGAATATTTTAAGGCTTTATGGACAAAAATATACAACAAATGGTGAAA
ATGGTGAAAATAAAACCATGTTTTGGCATAAAACTTAAAAAGTTAAGAAC
ATCCAAAGGCTTCAAAAGTTTTGGATGCTCTTATAAAAAAAGTGTCATGT
CCAGAATGGCGAAAATTTAATCAACTGATACGTTTTATTACAGGTCATTT
TAGTATCACCTTTGTACAGCCACGATCTTTACGCGAACGGTGCACGTAGA
ATGGGCGTTCTAGACTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCC
GAAAGTGATGAATGTTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATT
GTGTTTACATTCCACAAATGTGGTGGCATCAAGTCTATTCGAGGTACAAA
TTTTTTCCATTAGCAAATCCACTTTTCGGGTAGGCCATGGGGTCGCTTAG
AATTTTTTGAAAAGTTTGCTTCACCTTTAGGGAAGAAATTTTCGCGGAAT
TTAATTTCGCGGCGGAGAGGAATTTCTGTTTAAAATTTGACCTATTTTGC
CCTAAAAAGACCAATTTTATAGGTGATTTTTAAATCATGAGAATGTTCAT
GTTTCGCGGATTTGCCAAAAAAAAAACTTTCAAGGTCTTCAATAACTCTT
TCGCGAGAAATATCATTGCAATTCGTTGACTCTTACTTATTTTACTATCT
GGTATTTTAACCAAATACTGAGACCTAAAAATATAACTTTTTCACGTCCT
TCAATCTAAAACATACCCCAAATCACTTTACAAGGTTTCGAAATAGCTTT
TCACCGTCTATTGTTAGATATTATCGTATTTTAACCTAAAAGTTACGGTG
AATTTTGTGAACGTTGCAGACGTTTCATGCAATTTAGGCAATAACTTTAT
TTCTCATTCTGCTCTAGGAAGGAACGTCAGCAAGCAGTCTCTTTGTGGTG
GAAGTCAAAACCTTTTTGGAGGAAAGTCAAAGACCAAAACCCGTCTCTAT
CTGGACCCATGTCCAATGGTAAATCAATACTTTAAGGGAACTAAGTTTGC
AAAAATAAGTTATATTTCGCATAAATTGATACTGGGCGAAATAAGAGATT
TCCAATCCTGAAAATATCTTAAAAATATGATATTTTGGAAATACAGTATG
ATATTTTGGAAATACAGTATGATATTTCCAAAAGTTAGAAATATTTAGAA
AATATGATGTTTCAATCCTGGAAATATCATGAAATATGATATTTCCTAAA
CTTTGGAAATATAGAAAAGTCATATTTCCATATTTACTAATGTTCATGGA
AATATCACATTTTCAAGATATTTCCAGAATTGGAAATCTCTTTATTTCGC
CCAATGTGAAAATCAGTTTCGAGCTGATCTTTGAAAATCATTTTGCCAAA
ATTTATCAGTGGTCATATAATGCCCTGTTTTCTAGCCGAGAACCCTGAGA
CAAAGTTGTTTTCAAAATTATTTTTGATATTTTCAGACGAAAAAGGCTTT
TCATATGCAGACGCACTCATCGATTATGAGAATTGGGTTCAAAATGTGTC
CGAATCGATTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGAATGAGCC
ATTATGAATGGGAAACGGACAAAGATCCGAATGCACCGACAACGCTAGGT
GACGGCGGAGACTTTGAAGAGGTAGTCTGA Coding sequence (CDS) from alignment at sc0000289_pilon:164108..168187- >XLOC_008843 ID=XLOC_008843|Name=XLOC_008843|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2274bp|location=Sequence derived from alignment at sc0000289_pilon:164108..168187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAAATATGAAAATGAAAATCTTTCCAAAACTTATAATTGGTATAAC
TATATGCTTTCTTATGATTGGCTTTGGTAATCTCAATCAAGAATTTTGTC
CAAGTTTGCAGTCTTCACGTGCAGATATCAATTCAGACTTCTCCAGCCAG
GGGATGTTCTTAAATGATGCTAAATATGAAAATGAAAATCTTTCCAAAAC
TTATAATTGGTATAACTATATGCTTTCTTATGATTGGCTTTGGTAATCTC
AATCAAGAATTTTGTCCAAGTTTGCAGTCTTCACGTGCAGATATCAATTC
AGACTTCTCCAGCCAGGGGATGTTCTTAAATGGTCACTTAAAACCGTTTG
GTTCTCACAGACCTGCAACAAAGGTTGAAAAGTTGAAATATATGATTTCG
CCCGAAGATTTCTATATGAATTTTGTTATCAAACACAAGCCTGTTCTATT
TAAAGGTCACTTAAAACCGTTTGGTTCTCACAGACCTGCAACAAAGGTTG
AAAAGTTGAAATATATGATTTCGCCCGAAGATTTCTATATGAATTTTGTT
ATCAAACACAAGCCTGTTCTATTTAAAGGAGTAACAAAAAACTGGCCAGC
TTATACAAAATGGAATGATGAATATTTGAGGGATCATTATGGCGATAATG
AAATGAACATGGAAACAAAAGATGATGATAAATACGATCTTCCAACATCA
AGAACATTCAAAGATTTTCTGAACGTTTATAAAGATTCAAATATTTATAT
GGTCGGTGAGGAGTAACAAAAAACTGGCCAGCTTATACAAAATGGAATGA
TGAATATTTGAGGGATCATTATGGCGATAATGAAATGAACATGGAAACAA
AAGATGATGATAAATACGATCTTCCAACATCAAGAACATTCAAAGATTTT
CTGAACGTTTATAAAGATTCAAATATTTATATGGTCGGTGAGGTCTTACC
AGAGATGAGAGAAGACATTGTATTACCCCATTGTTTACGTTGTGAAGAAA
TGGATCGCTTTTTCTTTGTTTCTTATTATTGGCATTCGAACGGTAAAACG
ATGTCAACGTTACATGTTGACACAGATGAAAATCTACTATGCGTCGTCAC
AGGTCATAAAAAGGTCTTACCAGAGATGAGAGAAGACATTGTATTACCCC
ATTGTTTACGTTGTGAAGAAATGGATCGCTTTTTCTTTGTTTCTTATTAT
TGGCATTCGAACGGTAAAACGATGTCAACGTTACATGTTGACACAGATGA
AAATCTACTATGCGTCGTCACAGGTCATAAAAAGGTCATTTTAGTATCAC
CTTTGTACAGCCACGATCTTTACGCGAACGGTGCACGTAGAATGGGCGTT
CTAGACTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCGAAAGTGAT
GAATGTTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATTGTGTTTACA
TTCCACAAATGTGGTGGCATCAAGTCTATTCGAGGTCATTTTAGTATCAC
CTTTGTACAGCCACGATCTTTACGCGAACGGTGCACGTAGAATGGGCGTT
CTAGACTTGAATGCCAGTGCAGTTGACTTGGAGAGATTTCCGAAAGTGAT
GAATGTTCCTTACTATGAAGCATCAGTTGAAGAAGGTGATTGTGTTTACA
TTCCACAAATGTGGTGGCATCAAGTCTATTCGAGGAAGGAACGTCAGCAA
GCAGTCTCTTTGTGGTGGAAGTCAAAACCTTTTTGGAGGAAAGTCAAAGA
CCAAAACCCGTCTCTATCTGGACCCATGTCCAATGGAAGGAACGTCAGCA
AGCAGTCTCTTTGTGGTGGAAGTCAAAACCTTTTTGGAGGAAAGTCAAAG
ACCAAAACCCGTCTCTATCTGGACCCATGTCCAATGACGAAAAAGGCTTT
TCATATGCAGACGCACTCATCGATTATGAGAATTGGGTTCAAAATGTGTC
CGAATCGATTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGAATGAGCC
ATTATGAATGGGAAACGGACAAAGATCCGAATGCACCGACAACGCTAGGT
GACGGCGGAGACTTTGAAGAGGTAGTCTGAACGAAAAAGGCTTTTCATAT
GCAGACGCACTCATCGATTATGAGAATTGGGTTCAAAATGTGTCCGAATC
GATTGTCCGAATTCGCTGTCAAGAACAAGACGTCAGAATGAGCCATTATG
AATGGGAAACGGACAAAGATCCGAATGCACCGACAACGCTAGGTGACGGC
GGAGACTTTGAAGAGGTAGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000289_pilon | genome | sc0000289_pilon:164108..168187 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 946-1137:193 |
| Aaloc | 844-942:763 |
| Aaloc | 643-840:1488 |
| Aaloc | 472-642:2487 |
| Aaloc | 292-471:2899 |
| Aaloc | 169-288:3458 |
| Aaloc | 1-165:4081 |
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