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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:570758..576531- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008586 ID=XLOC_008586|Name=XLOC_008586|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5774bp|location=Sequence derived from alignment at sc0000043_pilon:570758..576531- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATGGACGTTCTAAGAGAATTTTTGGAAAATTCCTCCGCAAAAATGGA
TGTTAGGGATGATTGTGACGGAATTGCGGGATCTTTACGCCCGCTTCGCT
GGTACATCATTGGCTCTCTAGGGTTGGCTCTCGGTGAGTGATTCATTTTT
TTCTTGGTAGTGAAAACATATTAATAAACAGAACAGTCATTCTACTAAGT
TCTAACAACATTATCGGGTCTCGAACTCGAGCGGTAAAGTTATCATCAGC
TTGTCAAAACTCCGACTAATATTTCTAAATTTTGACTTAAAAGTGTCTAA
TAATTATAGAGAGTGTCACATTCTAACTTCGATATTCTTACACAGGCTCT
CAACTTTGGCAAGTAAATTTTTTTGAAATCATAAAAAAAATTATAGGAGT
GACAAAAGGGCTTCAAAAGTATACACACAGTTGAAATTCTGCATTTCAGA
GTTGAAAATATTGATAAAATATATTACAAACTTGTAAAAAAAATTCGAAA
ATAATTATTTTGTACATTATGAGTAATGTTCAAGCTCTATCAATCTTTTT
ACCTAAATAATTCAAAGAGATAAAATTATGACGGAATATTGTCGGATTTT
TCATACCAATTTTGAAATACAGGCGGCAACGAAGCTCGCTTCAAAGGGAC
AGTAAAAGATAGATGTCCAGTCGTTTATATGTTCATGATTGCACTTGATC
GCTTGTGTGTCGGTTAGTAACTTAAATTCGACGCATACTGAGTTCAAATT
GTTCGATCTTCAGAATAAGAATCGCGTGATGTGAAAATTGTTATTTTCTC
TGCGATTTTCAAGAGTCAGAAAGATTTTCATCTAAAAGCAATGTTTTAGT
TCAGTTGAATGTACCTACATTTCCCTAATGTTTCCTGGCATCATTTTCGA
ATGATAAGATTAAGCTTTTGATGTTTAAGTCACTATGGCGTGTGTTCTAT
TGATTCTAGCGACCGTAGTACAATGGTAGAGCATCCGGCTACGGTTCGCA
AGGTTGTGGCTTCAACCCCTAGCCGGGTCATACCAAAGATTCCCAAAATG
GTACTTGATGCCTCTCTGCTTGATGCTCAGCAATTAAGAGAAGGATCAAG
GGTAAGTGGAGAAATCCAGGGAGAAAGAGTGGCGCTCTCCCCTACCTTCG
GGTCGCCTCCGACTGCGGTCGCAGACTTACTTACTTATATTGGTTCTGGC
GATTCCGGAGCTCGCTTCATGTCTAATGTCTGAATCTCTATTTCCAGTAC
TCATCTTGGCCGAGTTGCACTCCCGAGCTTCTATCGAAAGGTTCATGGTG
TACAAGATGCGTGTCCGAAATATAACAGGTAGGTCTCCACATGCAAAACT
TATTAATTTTTTAAATTATGAACGTGGTACAAGCATGGAGGTAATAAAGA
TATAGATGGAGAGAAGACGTCTCGGTAATGATCTAAATGGTCGTTGAAAT
CTTTTATAAATCTATTCAAAGCGGCTTTTCTTTGATGTACCATCATTGGA
AGCAAAGAACATCAATTTATAACTTTATAAAAACAGAAAGAGACTGTTTG
GTTGATTTTGAAAAACTTAATTTTGCCGAAAATCCTTGTTAAAATGCGAT
TCGAAATAGTTTCAACTGATGTAAGACTAAAAGATTATATTAATTTCATA
AGGACACATTTTTGGGCTGGCATTTTTTTAACATTGAGAGTAGCATCGCA
TTATCATTGAAAGTTTCTTATCTTAAAATCTTCACGTATAAGTGGGCAGC
GGTTTTCATACTCTGACAAAATGATTGATACAAGGTTCCTAATCGTAACA
CGTAATTCCTTTTAAAATCTATCGATGGCTTGATGGGCAGCTTCCCCTAG
AAGTTTGGAGTATTGTGCTTATTATGTGAAGTTTTTTTCAATTTTTCATG
AAATGACATTTTAATTTCAATATACTTGTTAAAAATGTAATGTCTTTTCA
TTCATCTTAAATATTCCCACGAGTATACCCAAAATTAATCATCTTATTCC
CAAAGCGACAAAACAGCTGTTTGCTTCTGATGATAAATCAGAATAGAACA
AAAGGCATTTTGACTCTCCATCTATTTTTATTACCTCCATGGTACAATCA
TGAACGTTATCAGAATTACGGGGCTGGGGAAGAGTTTATTTTCTTGCAAC
AAGTTTTAAGTAGACTAGAGAACAGTTGTCGTTGATAAATTCCATAGCCG
CTAAAATTTATTTCCAAAACACTTCCACCAGGCTATATCATATCATATAG
GGGTTTGGACTTACCCGTCGTAAATACATGCTTGAAACTGTTGTTAATCC
AATCCAGGAGGCGTGTCTGATCCAACCAGAGATTTATAAAGCACGAATGG
CTAGACGTCGTGCTTTGGCTGAAAAGTGTGCCGAGGTTAGGTAGAAAATC
CTACTGAGGTCACGCGACTTTACAAAAGAATTTCAGCGCTTGACCAATGA
GAAGCTTCGCGGGTTTTCGAAAACAAAACAGCAATGCTTTTTTGCGATAT
TCACTTTTTTTTTTGCTTTGAAGAGCTTTAAAGTCTTTAAAAAGCACGAC
ATCTAGCCCTTTCGGGCTTTAAAAATCTATGATCCGACGCCATCTTGTGG
TGCTATTACCATGTATATTTGTTGTTGAAAAAAATCTGGGTTATGCGAAA
GCGATCTTTTTTTTTTGACTTTATTTGACTATCAATTTGTACTAGTAATC
TCATGGTTATGAGGGAAATTCGGAATTTCGAAATGTTTTGAAATTTCCCG
AGTGCAACGAGGGATTAATAACATTTTGAAATTTGGCCGAAGGTAATTTA
TCCATTATTTCATCAACCATGACATTAATAAAATCAATTTTACAGCTTTG
TTCATTTTGTCTTTTAGAAACGTTCAATAAAAAAATAAGTGGAATTAAAG
AATCCAAAAAGAAATCCAAATTTGCTGGCATTTTGAAAAATTCGGTGAAG
TTTTCTCGACATTTAGTTGCTGCTGATGACAAGAAGGTTGATGTGTGTGA
AAAAGGTAAAACAAAACGTAATTTCAAAGCTTCTAATACCCACCTGAATT
TGATGATATTTTTGTCTTATACACATTTTAGCTTTATATATTATGTCGGA
TATTTTCAAATGTTATATCATTAAATTCAAACCACATAAAAAAAACCATC
AAGCTAACTGCGGTCCAGTCTCCGTAACTCGAACACGTAAGCTAAGAAAA
TTTTGAGTTATGAAGTAAGGCTTTCAAGGCATTGTTAATTGAAGGGACTA
GAAACCTTGTTGAGTTAAGGAGACATTCGAGTTATAGAGGTTCGAGTTAA
GGCCGCTGCCCACTCAGCATTTTATGGTCGGCGAACATGGCGCACAGCTT
AATTATTGCATGAATTACATAAGTCTTCAAAGGCTGTCGCTTTGAGCACG
ACAAGAGTTGAAACTTTTCAACTTTTTTCACTGAGCTGTTCAGCTTCCTT
ATTGTTCTTTTTTAATAAGCCAATCAGAAGAGACATTTACAAAAATATCA
ACAATAGAAAGAAAAAATGTGCAGCATATCTCCACTTTATTTTGGATCAG
TGGAATGTTAAAAGCGTTCAGCGACCGAAGCGCCCGAGCCGCGCGCCTTG
TTCACCGACCATAAAATGCTGAGTGGGTAGCGGCCTTTAAAGATACTCTA
CTATTTTCCTCAAAGGGCCGGCGATTTGCACAATTACTTCGCCGCTGCGT
TTTGCTGCCTTTCGCAAGATATAGTTTTTTCTTATTCAAAATTTTTACTT
TCGCGACTTCGGCGCAGCGGCAAAACCCAACGCGCAGCGCACCCTTTCGC
ATGACATAAACCTATTTATTCTTTAAAATGTCTACCTTCGCGGCTTCGGC
GCAACGGCGAAACATATTACGCAGCGCAACCTTTCGCTTGATTACACTTT
CTTTTCTGACGACATTATTGATCTGACGTCACTTTCATTCTCAGAAACTC
TGTATGAGCTTCAGTTGCTGTTAACAAAGATTTGCGCCGCGCGATATGTT
TCGCCGCTGCGCCGAATCCGCGAAGGTCATTTCAGGACACAAAATAACTC
TTTATAAACGCGAAAGACTTGCGCTGCGCAATATCTTTCGCCGCAACGCC
GAAGCTGTGAAGGCCATTTCTGATGTAAAACTTATCATATAAAATGATAT
ATTAGCATGGATAATACTGCTTCGCGACTTTGGCGCTGCGGCGAAATATA
TTGTGCAGCGCAAGTTTTTGTATGATTTCACTTCCTGTGACAACATTTGA
ACTGGATATAAAATAAATCATAACATATGCGAAAGACTTGCGCTGCGCAA
TATGTTTCGCCGCTGCGCCGAAGCCGCGAAGGCTGTTCCAGACATAAAAT
AACTCATACCATATGTAAAAGACTCGCGCTGCGCGATATGTTTCTTCGCT
GCGCCGAAGCCGCGAAGGCTGTTCCAGACATAAAATAACTTATACCATAT
GTGAAAGACTCGCGCTGCGCAATATGTTTCGTCGCTGCACCAAAGTCGCG
AAGGCTGTTCCAGACATAAAATAACTTATACCATATGCGAAAGACTCGCG
CTGCGCAATATGTTTCGTCGCTGCGCCGAAGTCGCGAAGGCTGTTCCAGA
CATAAAATAAGTTATACCATATGCGAAAGACTCGCGCTGTGCAATATGTT
TCGTCGCTGCGCCGAAGTCGCGAAGGCTGTTCCAGACATTAAATAACTTA
TACCATATACGAAGTCACGAAAGCTGTTCCAGACATAAAATAACTTATAC
CATATGCGAAAGACTCGCACTGCGCAACATCCTTCGCCGCTGCGCCGAAG
TCGCGAAGGTTATTTCAGACTTAGAATAGCCCCCATCACACGCGAAAAGC
TTGCACACGTAAAATATGTGCGCTAACTACGTAAGCCACGCGCAGCGCCG
AAGTAAGTGTGCAAATCGTCGCCCCACTCATTTTCCTCTAGGATCACTTA
CAGACACCAGTGATGTACCTTCTTTCCCGGCGAAAGATTCAGTTCAATGT
TTAATGGAAAAGAGGATGAAAAGAGACCGCTACTCAAATGACGCGCTTTC
AAGATTGCTGGAAAGTCTTCGTAAGAAGATAAAGAAAAGACAGAAAACAT
CTTCACCCTTGCGCTATGATCCTGTTCCCTCTAAGGTTGCAAAAGAAGAT
GTTTGTACTTCAAAGGAAAATAATTCCACTTCTACTGAAAAAGGTCCGAT
CTCTGTTGGGGCTGCCAATATACCGCAGAGTCCTGGCTCTAGCTCTGGTG
ACGAGACTTGTTCAGAAAAGCCAAATACTGCTTTCGACAAAAACAAACTC
TCTTTCCCTATTGCTAAAGAGTCATCTTGTGTTACACCTACTGTCAGTTG
CTCCCAAAAACAGGATTCCGGCTCTTGTTATAAAGCAAAGAATGAAATAT
TGGCGCGGAAGGGTTTTCCCGAATATAAGCCAGGCCAAATACCAAAGCTG
GTCGAAGAACATCGAAAGAAGAAAGCTCTTTTGAATGAAGAGAGCGTTGT
CATTCACCATGTGAGAGATGATAACCCCGCCCTCGAACCCACCCCAATGG
AGCCATTTGTGCCACGCCCGCCCATCTCAAGCACCATTCAGTGTAGTTCC
AGTTCTAGTGATACCTCATACCGTATGGAAGTAACTTACTGTCCGCCTTC
TGTTGACAGTTTCGAATCCAATGACGCCCCTCGCCGCCCTCAGAAAGGAG
GGAAATTCAAAAGATTTAGAAGAAGGCTTCGAAATTTGTTTTCCTGCAGA
TCTGGCAGCCAGACTTATGACTGA Coding sequence (CDS) from alignment at sc0000043_pilon:570758..576531- >XLOC_008586 ID=XLOC_008586|Name=XLOC_008586|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2370bp|location=Sequence derived from alignment at sc0000043_pilon:570758..576531- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATGGACGTTCTAAGAGAATTTTTGGAAAATTCCTCCGCAAAAATGGA
TGTTAGGGATGATTGTGACGGAATTGCGGGATCTTTACGCCCGCTTCGCT
GGTACATCATTGGCTCTCTAGGGTTGGCTCTCGAAAATGGACGTTCTAAG
AGAATTTTTGGAAAATTCCTCCGCAAAAATGGATGTTAGGGATGATTGTG
ACGGAATTGCGGGATCTTTACGCCCGCTTCGCTGGTACATCATTGGCTCT
CTAGGGTTGGCTCTCGTACTCATCTTGGCCGAGTTGCACTCCCGAGCTTC
TATCGAAAGGTTCATGGTGTACAAGATGCGTGTCCGAAATATAACAGTAC
TCATCTTGGCCGAGTTGCACTCCCGAGCTTCTATCGAAAGGTTCATGGTG
TACAAGATGCGTGTCCGAAATATAACAGAAACGTTCAATAAAAAAATAAG
TGGAATTAAAGAATCCAAAAAGAAATCCAAATTTGCTGGCATTTTGAAAA
ATTCGGTGAAGTTTTCTCGACATTTAGTTGCTGCTGATGACAAGAAGGTT
GATGTGTGTGAAAAAGAAACGTTCAATAAAAAAATAAGTGGAATTAAAGA
ATCCAAAAAGAAATCCAAATTTGCTGGCATTTTGAAAAATTCGGTGAAGT
TTTCTCGACATTTAGTTGCTGCTGATGACAAGAAGGTTGATGTGTGTGAA
AAAGGATCACTTACAGACACCAGTGATGTACCTTCTTTCCCGGCGAAAGA
TTCAGTTCAATGTTTAATGGAAAAGAGGATGAAAAGAGACCGCTACTCAA
ATGACGCGCTTTCAAGATTGCTGGAAAGTCTTCGTAAGAAGATAAAGAAA
AGACAGAAAACATCTTCACCCTTGCGCTATGATCCTGTTCCCTCTAAGGT
TGCAAAAGAAGATGTTTGTACTTCAAAGGAAAATAATTCCACTTCTACTG
AAAAAGGTCCGATCTCTGTTGGGGCTGCCAATATACCGCAGAGTCCTGGC
TCTAGCTCTGGTGACGAGACTTGTTCAGAAAAGCCAAATACTGCTTTCGA
CAAAAACAAACTCTCTTTCCCTATTGCTAAAGAGTCATCTTGTGTTACAC
CTACTGTCAGTTGCTCCCAAAAACAGGATTCCGGCTCTTGTTATAAAGCA
AAGAATGAAATATTGGCGCGGAAGGGTTTTCCCGAATATAAGCCAGGCCA
AATACCAAAGCTGGTCGAAGAACATCGAAAGAAGAAAGCTCTTTTGAATG
AAGAGAGCGTTGTCATTCACCATGTGAGAGATGATAACCCCGCCCTCGAA
CCCACCCCAATGGAGCCATTTGTGCCACGCCCGCCCATCTCAAGCACCAT
TCAGTGTAGTTCCAGTTCTAGTGATACCTCATACCGTATGGAAGTAACTT
ACTGTCCGCCTTCTGTTGACAGTTTCGAATCCAATGACGCCCCTCGCCGC
CCTCAGAAAGGAGGGAAATTCAAAAGATTTAGAAGAAGGCTTCGAAATTT
GTTTTCCTGCAGATCTGGCAGCCAGACTTATGACTGAGATCACTTACAGA
CACCAGTGATGTACCTTCTTTCCCGGCGAAAGATTCAGTTCAATGTTTAA
TGGAAAAGAGGATGAAAAGAGACCGCTACTCAAATGACGCGCTTTCAAGA
TTGCTGGAAAGTCTTCGTAAGAAGATAAAGAAAAGACAGAAAACATCTTC
ACCCTTGCGCTATGATCCTGTTCCCTCTAAGGTTGCAAAAGAAGATGTTT
GTACTTCAAAGGAAAATAATTCCACTTCTACTGAAAAAGGTCCGATCTCT
GTTGGGGCTGCCAATATACCGCAGAGTCCTGGCTCTAGCTCTGGTGACGA
GACTTGTTCAGAAAAGCCAAATACTGCTTTCGACAAAAACAAACTCTCTT
TCCCTATTGCTAAAGAGTCATCTTGTGTTACACCTACTGTCAGTTGCTCC
CAAAAACAGGATTCCGGCTCTTGTTATAAAGCAAAGAATGAAATATTGGC
GCGGAAGGGTTTTCCCGAATATAAGCCAGGCCAAATACCAAAGCTGGTCG
AAGAACATCGAAAGAAGAAAGCTCTTTTGAATGAAGAGAGCGTTGTCATT
CACCATGTGAGAGATGATAACCCCGCCCTCGAACCCACCCCAATGGAGCC
ATTTGTGCCACGCCCGCCCATCTCAAGCACCATTCAGTGTAGTTCCAGTT
CTAGTGATACCTCATACCGTATGGAAGTAACTTACTGTCCGCCTTCTGTT
GACAGTTTCGAATCCAATGACGCCCCTCGCCGCCCTCAGAAAGGAGGGAA
ATTCAAAAGATTTAGAAGAAGGCTTCGAAATTTGTTTTCCTGCAGATCTG
GCAGCCAGACTTATGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:570758..576531 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 355-1185:832 |
| Aaloc | 217-351:2906 |
| Aaloc | 136-213:4526 |
| Aaloc | 1-132:5775 |
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