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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:432332..436469- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008475 ID=XLOC_008475|Name=XLOC_008475|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4138bp|location=Sequence derived from alignment at sc0000124_pilon:432332..436469- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAATCACTGATATTCAATGTTTTGTCCACACTATGTTTCATAGC
ATTTATTGCAATTTGTCGAATCTTGCGAAGTAAAGACTTGGTTCCTGATA
CAGAACTTTTTTATCAATCATCTTCAAAGTTTGTCAAGAATATTTTGGCA
AATTCCCCAACACTACAGGAAAGGTAAAAATCAATCCAGAGTAGATATTT
AAATATTCCTTTTCATGGTTCATGTTACTAAAATTTAAATTGTGGTAGCT
ATTTGTTTGTTTGCAATAATCTCTCGCATTTTTCTTATTGTACTCTCATC
CATCGTAGGAAAAAGGAATCATTTTCATATTTCTTTCCTCTAGATATATT
CCTATGTTCTTATGGGGGAAGAGCGGACACATTCAAAGTGTTTTGTTTTC
TGTTGTTGGAAGATTTGGCCAGAAAGAACTTGTTCAAAAAAGACGAGTTG
AAATCCCTGCTAGTGATGGATTGATCATATCATATGACTTGTTTCAGAAA
GACCCAAATATTAAAGGAAAACACGTAAGACCATTTTAAATTTTACACTT
TTATTAAACTTTCTATAGGTATTATTAATGTAATTTAAACCTTTTTTTTA
AATGATCTAACCTTTACTATATTGTTTTTAAAAAGAAATATGAACGCCCA
GTATCTGTTTTATATTGAAGTGGAAATTGTAATCTACAATTTAAGCAAAA
TGTTATTCCCAGAATAATATCATATGGATTACATCAGAGAAACACAAAAT
TCTGCTATTAGATGTTTGTTAAGAAAGCCAGAAAATATTATGAATGGGTT
TTTCTGTTGTTTTTTTAAGCCAAAAAGTTGTTTCCTTTTTAACATCTTCG
AAAGTTAGTATACCTAGAATGTCTGCTATTATCGGAATTGAAAATAGTAT
CATTCAATTAAAGTTTCAATTTTTTTGTTTTTCATACAGAAAGACGAGTT
GATCTTGGTAGTACCAGGTATTTGCAATACAGGAGACACAGACTATGTGC
ATGAATTTTCGTGTTTTATGAACAAGTCTGGGTACGATGTGGCTGTTCTC
AATCACACTGGCGCTCTGAAGAACTCCAAAATCACACAACCCAGGATATT
CAGTTATGGTAACGTAATGTTCAATTCTCGGCATTTGCATTTTCGATTTT
CTCTTACTGTATTCCTTATTTTAACGTGCCAATGCACTAGATAGATAGAG
TCGATATTTTACGTGGTTACCCCAGTTATCTAGGACTTTGAGTCAGTCTT
AGATTGTTTTCACAGGGTTCAGGGCCTATGGTGCTAACGGCTTGACCACT
CGGAGATCACTCCTTAAATGCGCACTATTTTCGAAATGAATGCAATATCA
CAAGCCTCGTTGCCAAGATACTTTAATATTCTAAGACATAGTGTTTGTAA
ACCTCAGTGCTTTTGTATCAAAATTGATGATGGTCTTTTGGGAATACATA
TCAATTGTTCCAAATGTCGCCTGAAATTATCAAATTTGTAAACGAAACCT
ACAATGGTAAGAAAAATTACACGAAATGAATGAAAATCTGTGACTTTTTC
TGTACAAAAGCATCTAATGTTACCTAAGCTGTTCAATTCTCCTACCAGGT
AAAACGGACGACTTGGATGTGATTGTGAATGATTTGTTTCGCAAACATCG
ACAAAAGAAGTTGATCGGTATTGGTTTTTCGCTTGGTGCTCAAATTTTGA
TGAAGTATTTGGGTGAAAAGAAACAAAATCAGGAGAAGTTTTCTTTAGCA
ATGTCCATCTGTCAAGGATATGATCTCAGAGAGTAAGAAAACTTTTCTTT
TCCTCATGTTCATATTAAACTTGATTAAGAAATTTCTCGGAAAATACTCT
TCTAAATATTTATTAGGCTAGTTGAAAAACTATAAAGCCCAGTCCACTAA
TCTCTATGTGCTTGACTGGATCAAGGTTTCTATATAATAGGAAGCGTGTC
CGACCTTAATCTGACAGCCATTTTGCTTTTTCGTTTACTTGACGACCGTC
GATGGGATTCAAATGTTTTGAAGTTCGAACTTTTGAAAGTAAGATAGAAA
ACAACACTGCGGACTAGTCAACCTCCAAACTTGTTACACTCCAACGTGAA
ATCTGTGATATCAGTTAGCCTATCTAGTGTGTTAGATATGAAATCTGTGG
ACCAGTCTGACATAAAAGTAAATGAGATCTTAGCGCTATTATAAATTTTA
ATTACCAAGATGGCTAAACCACCTTCAGATTTTTTCTTGAATTAAAAACT
GAATTTCTGAATAATTTGAGGCTCAATCAAAGCCTGCTTGATACAACGTA
CTTTAGGCGAACAAACTTTCGCAAGCAGAAACTTTTGTGATTTTCGCGAA
TTTTGGCTCTTTTCGCGAAAGTAAATGTCTTTAAAAATTCTAGGAAGGGC
AATTCGCGAAAGTTTAAGCTCGCGAAAAATTCTTGACAAAATAGAAAATC
TGTAAAACTTTGAATAAAATGTAACTTTTATGGCACTTTTTAGCTTGCTA
AAAGACTAATAAGTCAAAAGACAAATGTTTCAAGCCAATCCAAGAAGTAT
TCGTCTCTCTAAGCCATTTTTCATGTGAAAATTCTGTAATTTACGTCTTG
ATTCGCGAAAGTTTATGTGATTTTTCGTCCTCGCGAAAGTTTCTGCTTGC
GAAAGTTTGTACGCTTAAAGGATATAATTGTAATCGTTTCTTTTTAGAGC
TTGTGATTTGCTTCAAGAATGGGGCAACCTGAGGCGTTTTTATAACCTCA
TCATTACAAAAAACATGCTGAAGGTCATCTCAAGACACAAAACTTCATTC
CAAAAGCAACATTCTGAGAACAAACGTTTAGACTGGCAACGAATCGAATC
TTCCAAAGCATTGCATGAACTCGATTCTGAATTCACTTTGTAAGTCATCT
TCATATTTCCCATTTTAATTGTTGGAATTTTAATCGTATTATTCTTATTT
GTAATGTTTTAATGTCCATCGACTTGTTTCTATTTCTATTTCTATTTGGT
TGAGTTGCAGGAGGCTTTAGAGGCCTATTCTCGCAACTATAGACGCTTAC
TAGTGAGCGTCCCGTCAGCACCTTGAACTGACTACCCAATTCCCCTCACA
TGGCATGGGTTGACCCGGGCGAAGGAACCTTCACTTGCCAAGTGAACTGC
CGTGAGTGGGAATCGAACCCTGGCCCTTACACAGAAGCCAAGGTTGACTA
CCACTATACCACGGCACCTTGTTTCATTATTGTATGTACATTTCTCCAGT
AGAACTTTGGAAATGTAATACATACTTAATTTGAACTGCGTTGAATGAGA
AGATTTCTACTCGAAGATCTCTAAGGTTCAATTTTCAATTTTTTGTTGTG
TTTTTCTTTTCAGGAAAGTGTTTCGCGAGAAAGAGAAACTGTATGATTGG
TACTGGAAAGAAAGTTGCAGCCGAAATTTGAACAAAGTAAATTCAAATCT
ATTTGGTTTGTTTAAGATTCTTATGAAATTGTATAGCTTTGATTTGTTTC
CCTAATACAACATACAAAAAACCAAGTGGTCACCACCAAAAAGCATGGCA
CCTTTTCAGGATAGGTCACATTCATTAAATAGCTCCAAAATGAGCTCGAC
AAATTTTTTTTCATTGAAAGCCCGCATGTGTATCATTTGGCTACATAATT
AATGGAAGTTTTATTTCTTTAGATCGAAATTCCAGTGTTTATGGTGAATG
CAAAGGACGATCCTCTAGTTCCAGAGTGTTTGTTTCGATATCCCAAGTCT
CTTGTTGGTAAGTTCCATTCATTTCTTAAAGAGTAAGTTTTTCAAAAAAT
ATGGCATTTTTTTCGGAATCATAGGAAAAAACACTTTATAGAATTGATGT
CGAATTCCTCTTTTGTTGAAATTGATAAAAAATGTGAATGTAAGGTTTGC
ACCTTCAAGTATGAGCGGTCTATGACATGATACATGTTTTATCAAAATCC
TTCCTTTTCTTCTAGAACACAACAAAAACTGTTTGTTTGTGGTGACAGAA
TTTGGTGGCCATCTTGGATTTTTCGAAGGTGGTTATTTTCGCCCGAATCG
GGTTTCATGGATTGATCGGGTTATCTTGGAATATTTGAATGGGGCTCTGA
ATGAGTTGAAAAATGAGAAAAGTATTGGGGTGCGCTGA Coding sequence (CDS) from alignment at sc0000124_pilon:432332..436469- >XLOC_008475 ID=XLOC_008475|Name=XLOC_008475|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2460bp|location=Sequence derived from alignment at sc0000124_pilon:432332..436469- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAATCACTGATATTCAATGTTTTGTCCACACTATGTTTCATAGC
ATTTATTGCAATTTGTCGAATCTTGCGAAGTAAAGACTTGGTTCCTGATA
CAGAACTTTTTTATCAATCATCTTCAAAGTTTGTCAAGAATATTTTGGCA
AATTCCCCAACACTACAGGAAAGATGGAACAATCACTGATATTCAATGTT
TTGTCCACACTATGTTTCATAGCATTTATTGCAATTTGTCGAATCTTGCG
AAGTAAAGACTTGGTTCCTGATACAGAACTTTTTTATCAATCATCTTCAA
AGTTTGTCAAGAATATTTTGGCAAATTCCCCAACACTACAGGAAAGATAT
ATTCCTATGTTCTTATGGGGGAAGAGCGGACACATTCAAAGTGTTTTGTT
TTCTGTTGTTGGAAGATTTGGCCAGAAAGAACTTGTTCAAAAAAGACGAG
TTGAAATCCCTGCTAGTGATGGATTGATCATATCATATGACTTGTTTCAG
AAAGACCCAAATATTAAAGGAAAACACATATATTCCTATGTTCTTATGGG
GGAAGAGCGGACACATTCAAAGTGTTTTGTTTTCTGTTGTTGGAAGATTT
GGCCAGAAAGAACTTGTTCAAAAAAGACGAGTTGAAATCCCTGCTAGTGA
TGGATTGATCATATCATATGACTTGTTTCAGAAAGACCCAAATATTAAAG
GAAAACACAAAGACGAGTTGATCTTGGTAGTACCAGGTATTTGCAATACA
GGAGACACAGACTATGTGCATGAATTTTCGTGTTTTATGAACAAGTCTGG
GTACGATGTGGCTGTTCTCAATCACACTGGCGCTCTGAAGAACTCCAAAA
TCACACAACCCAGGATATTCAGTTATGAAAGACGAGTTGATCTTGGTAGT
ACCAGGTATTTGCAATACAGGAGACACAGACTATGTGCATGAATTTTCGT
GTTTTATGAACAAGTCTGGGTACGATGTGGCTGTTCTCAATCACACTGGC
GCTCTGAAGAACTCCAAAATCACACAACCCAGGATATTCAGTTATGGTAA
AACGGACGACTTGGATGTGATTGTGAATGATTTGTTTCGCAAACATCGAC
AAAAGAAGTTGATCGGTATTGGTTTTTCGCTTGGTGCTCAAATTTTGATG
AAGTATTTGGGTGAAAAGAAACAAAATCAGGAGAAGTTTTCTTTAGCAAT
GTCCATCTGTCAAGGATATGATCTCAGAGAGTAAAACGGACGACTTGGAT
GTGATTGTGAATGATTTGTTTCGCAAACATCGACAAAAGAAGTTGATCGG
TATTGGTTTTTCGCTTGGTGCTCAAATTTTGATGAAGTATTTGGGTGAAA
AGAAACAAAATCAGGAGAAGTTTTCTTTAGCAATGTCCATCTGTCAAGGA
TATGATCTCAGAGAAGCTTGTGATTTGCTTCAAGAATGGGGCAACCTGAG
GCGTTTTTATAACCTCATCATTACAAAAAACATGCTGAAGGTCATCTCAA
GACACAAAACTTCATTCCAAAAGCAACATTCTGAGAACAAACGTTTAGAC
TGGCAACGAATCGAATCTTCCAAAGCATTGCATGAACTCGATTCTGAATT
CACTTTAGCTTGTGATTTGCTTCAAGAATGGGGCAACCTGAGGCGTTTTT
ATAACCTCATCATTACAAAAAACATGCTGAAGGTCATCTCAAGACACAAA
ACTTCATTCCAAAAGCAACATTCTGAGAACAAACGTTTAGACTGGCAACG
AATCGAATCTTCCAAAGCATTGCATGAACTCGATTCTGAATTCACTTTGA
AAGTGTTTCGCGAGAAAGAGAAACTGTATGATTGGTACTGGAAAGAAAGT
TGCAGCCGAAATTTGAACAAAGAAAGTGTTTCGCGAGAAAGAGAAACTGT
ATGATTGGTACTGGAAAGAAAGTTGCAGCCGAAATTTGAACAAAATCGAA
ATTCCAGTGTTTATGGTGAATGCAAAGGACGATCCTCTAGTTCCAGAGTG
TTTGTTTCGATATCCCAAGTCTCTTGTTGATCGAAATTCCAGTGTTTATG
GTGAATGCAAAGGACGATCCTCTAGTTCCAGAGTGTTTGTTTCGATATCC
CAAGTCTCTTGTTGAACACAACAAAAACTGTTTGTTTGTGGTGACAGAAT
TTGGTGGCCATCTTGGATTTTTCGAAGGTGGTTATTTTCGCCCGAATCGG
GTTTCATGGATTGATCGGGTTATCTTGGAATATTTGAATGGGGCTCTGAA
TGAGTTGAAAAATGAGAAAAGTATTGGGGTGCGCTGAAACACAACAAAAA
CTGTTTGTTTGTGGTGACAGAATTTGGTGGCCATCTTGGATTTTTCGAAG
GTGGTTATTTTCGCCCGAATCGGGTTTCATGGATTGATCGGGTTATCTTG
GAATATTTGAATGGGGCTCTGAATGAGTTGAAAAATGAGAAAAGTATTGG
GGTGCGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:432332..436469 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1060-1230:172 |
| Aaloc | 973-1056:467 |
| Aaloc | 901-972:775 |
| Aaloc | 709-897:1441 |
| Aaloc | 526-705:2539 |
| Aaloc | 355-522:3200 |
| Aaloc | 175-354:3795 |
| Aaloc | 1-171:4139 |
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