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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:345943..348642- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008473 ID=XLOC_008473|Name=XLOC_008473|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2700bp|location=Sequence derived from alignment at sc0000124_pilon:345943..348642- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCTCGTCGACAGAACTAACGTGCTCAAGAACAAGGAAAACATCAT
GGTACCAAACTCCAACCAAATTGGACTTGATTTGGAGAAAAAGATGCAAA
AACCAATGGTCAGCGATGTTGCCTCTATCATCGCAGCAGTAAGTTGTCTA
TTAAATCCCTTTTCCACACACTACAATGCCAGAAATGTGTAGACCATATA
AACAGCTTGGGTTACTTCACTTAAAATCAATTGTCAGAGCTATTTTATCA
GGGCAAGACAAAAAAGGTGGCACTTCCGTTCGGTTTGGGAACGCAATCTC
TAAACTTTTCAGCCTAACCAAAATGTTTTATTTTTCACTTTTCTTCTAAA
CTGAAAAAATTACTGAAATTTGAGGGGGTTTTGATTGACATAGCTTAAAG
GGTCCCCTCGCTTGTTTGTGATCTTTAAGAAATCAATCTATATTGGTCGA
AAAACCCCTAACAACATATTCAAAGAACATAAAACTTACTGCTAGTTCCT
GTAGAGATATCGCGCATTTGTCTCAACTACTTGTGTTACAAGAGCGCGAG
AAAATTCAAAGGACTTCAGAAGCCAGGTTGAGTGAACATCAAAATTTATA
ATTTGTAATTATGGTGCAAAGAAAGAGTTTTGCATGCTAATACTTTGGGC
AGTTGCTTTTCATATGATCATGAAGTGAGTGCCTTGTTATCATATTTAAG
CGAGGGGTCCCTTTAAGAAAAGCATATAAAACGAACTTCCCCTGCCTGAG
GAAAACCTAGGCAAAGACAGATTTGTTTTATACCCCTAGAGACCAAAAGT
TGGAGAGCATCAAAATGATGCGCGCAAATCTTTATTGCCAATTTACAGGA
AAGGTGTATTAGAAGAGGGATGCCAACATTACTAGATAGACCAACTTACG
GTACTTGCTGAAAGTCCCGAAAGTTTCAGGCTTAAAAAGATTAATGTCCA
ATCTATTTCTTTTTCAGAAACCAGCAAAGATTGACAAAGATGCACAAGAA
GAACCTTTGTTGCGAGAAAATCCACGTAGATTTGTCTTGTTCCCAATCAA
ATATCCTGATATCTGGGAAATGTACAAAAAGGCAGAGGCATCATTCTGGA
CTGCTGAAGAAGTGGATTTGGCTGTTGATGTGAAACATTGGCAAGAGAAA
CTGAAACCTCAAGAGCGATACTTTATTTCACATGTATTAGCATTCTTTGC
TGCAAGTGATGGTATTGTTAATGAAAACCTGGTAAGCAAACCTCTTGCGC
CTACAAGGGAGAATAGGCAATTGCTTTACTCTAGACCATTCTTCATATAT
TTTTAATGTTTAATCATCACAAGACCGCCTTTTATCATTCATGAAAATCA
ATGGGGTCTAAATCTTGTTTCTTTAGAAATACATCAGTAAAATACTTAAC
ATATCGCCAATGTTCAAAAACTGCATTTCAGACCTTAACAATAAGAGGTC
ATCGTGACTAAAGACATGTAGCTTCTGGCTGTTCCTTTGCCCATTAAATT
ATTGGCCCATGGATATTTCTATGAACTATTTTTTCTCTAATCTCTTTTAC
AGGTTGAATGTTTCAGCCAAGAAGTCCAAATTCCAGAAGCCCGTGCATTT
TATGGTTTCCAAATTGCAATCGAAAACATCCACTCAGAAATGTACTCTTT
ATTGATTGAGACTTTGATTGAAGATCCAACTGAACGTGGAAATCTCTTTA
ATGCCATTGAAACCATGCCTTGCATTCAAAAGAAAGCTGTCTGGGCTTTG
AAATGGATCAATAAAGAGCGAGCATCCTATGCTGAACGTATCATTGCATT
TGCTGCAGTTGAGGGAATCTTCTTCTCTGGTTCCTTTGCATCTATCTTTT
GGTTGAAAAGCAGGTGAGTTAAATCCTACTTTGGTTCCTTGATATACTTC
ACTCTTAACTGTTTAACTGTCAACCTTGTGACTGAACTCAAATATTTAAA
TTTATTTTTCAGGGGAGTCATGCCTGGACTTACCTTTTCAAATGAGTTAA
TCAGTCGTGATGAAGGATTACACTGTGACTTTGCTTGTCTAATGTTCAAA
CATTTGGTCAACAAACCTTCAGAAGAGAAAGTCAAAGAAATCATTTTAGA
TGCTGTCAGAATTGAACAGGAATTCTTGACCGAATCATTACCATGTGACT
TGCTTGGAATGAACAAAGGATTAATGAAAACATACATTGAATTTGTTGCA
GACAGATTGCTTCTTGCTCTTGGATGTTCAAAGGTAAGGAATATTTGAAA
AAAACATGATTGATCTAATACTGTTTAGCAATTGGGCTGCATCCCCTTCC
TTAGATTTAACTCAAATTCAATCACTAGCTTTACCTGACATTAGAGTACT
ACACTGTACTATACACACACCATACTATAGAACCCAGAACTTTTTAGCTC
AAATAAATCTAAATTAGAAATGTTGACATCTACACCTTTGTTCCTACTTT
GAAATTTATCCTGTGTATCAAACCAATCCCTTATCCTGGGCAAAGTACTA
AAAAAGTTTTCTTTTTTAATTTTATATAGATTTGGCATCGTGAAAATCCT
TTCGATTTTATGGAGAACATTTCTTTGGGACGTAAAGCCAACTTCTTCGA
AAGTCGTGTATCTGACTACCAAAAGTCTGGTGTCATGGAATCACTAAACG
ATACAGGAAAAGACCTTCAGTTCGACGAACTAGATGATTTGGATTTCTAA
Coding sequence (CDS) from alignment at sc0000124_pilon:345943..348642- >XLOC_008473 ID=XLOC_008473|Name=XLOC_008473|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2310bp|location=Sequence derived from alignment at sc0000124_pilon:345943..348642- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCTCGTCGACAGAACTAACGTGCTCAAGAACAAGGAAAACATCAT
GGTACCAAACTCCAACCAAATTGGACTTGATTTGGAGAAAAAGATGCAAA
AACCAATGGTCAGCGATGTTGCCTCTATCATCGCAGCAATGGCTCTCGTC
GACAGAACTAACGTGCTCAAGAACAAGGAAAACATCATGGTACCAAACTC
CAACCAAATTGGACTTGATTTGGAGAAAAAGATGCAAAAACCAATGGTCA
GCGATGTTGCCTCTATCATCGCAGCAAAACCAGCAAAGATTGACAAAGAT
GCACAAGAAGAACCTTTGTTGCGAGAAAATCCACGTAGATTTGTCTTGTT
CCCAATCAAATATCCTGATATCTGGGAAATGTACAAAAAGGCAGAGGCAT
CATTCTGGACTGCTGAAGAAGTGGATTTGGCTGTTGATGTGAAACATTGG
CAAGAGAAACTGAAACCTCAAGAGCGATACTTTATTTCACATGTATTAGC
ATTCTTTGCTGCAAGTGATGGTATTGTTAATGAAAACCTGAAACCAGCAA
AGATTGACAAAGATGCACAAGAAGAACCTTTGTTGCGAGAAAATCCACGT
AGATTTGTCTTGTTCCCAATCAAATATCCTGATATCTGGGAAATGTACAA
AAAGGCAGAGGCATCATTCTGGACTGCTGAAGAAGTGGATTTGGCTGTTG
ATGTGAAACATTGGCAAGAGAAACTGAAACCTCAAGAGCGATACTTTATT
TCACATGTATTAGCATTCTTTGCTGCAAGTGATGGTATTGTTAATGAAAA
CCTGGTTGAATGTTTCAGCCAAGAAGTCCAAATTCCAGAAGCCCGTGCAT
TTTATGGTTTCCAAATTGCAATCGAAAACATCCACTCAGAAATGTACTCT
TTATTGATTGAGACTTTGATTGAAGATCCAACTGAACGTGGAAATCTCTT
TAATGCCATTGAAACCATGCCTTGCATTCAAAAGAAAGCTGTCTGGGCTT
TGAAATGGATCAATAAAGAGCGAGCATCCTATGCTGAACGTATCATTGCA
TTTGCTGCAGTTGAGGGAATCTTCTTCTCTGGTTCCTTTGCATCTATCTT
TTGGTTGAAAAGCAGGTTGAATGTTTCAGCCAAGAAGTCCAAATTCCAGA
AGCCCGTGCATTTTATGGTTTCCAAATTGCAATCGAAAACATCCACTCAG
AAATGTACTCTTTATTGATTGAGACTTTGATTGAAGATCCAACTGAACGT
GGAAATCTCTTTAATGCCATTGAAACCATGCCTTGCATTCAAAAGAAAGC
TGTCTGGGCTTTGAAATGGATCAATAAAGAGCGAGCATCCTATGCTGAAC
GTATCATTGCATTTGCTGCAGTTGAGGGAATCTTCTTCTCTGGTTCCTTT
GCATCTATCTTTTGGTTGAAAAGCAGGGGAGTCATGCCTGGACTTACCTT
TTCAAATGAGTTAATCAGTCGTGATGAAGGATTACACTGTGACTTTGCTT
GTCTAATGTTCAAACATTTGGTCAACAAACCTTCAGAAGAGAAAGTCAAA
GAAATCATTTTAGATGCTGTCAGAATTGAACAGGAATTCTTGACCGAATC
ATTACCATGTGACTTGCTTGGAATGAACAAAGGATTAATGAAAACATACA
TTGAATTTGTTGCAGACAGATTGCTTCTTGCTCTTGGATGTTCAAAGGGG
AGTCATGCCTGGACTTACCTTTTCAAATGAGTTAATCAGTCGTGATGAAG
GATTACACTGTGACTTTGCTTGTCTAATGTTCAAACATTTGGTCAACAAA
CCTTCAGAAGAGAAAGTCAAAGAAATCATTTTAGATGCTGTCAGAATTGA
ACAGGAATTCTTGACCGAATCATTACCATGTGACTTGCTTGGAATGAACA
AAGGATTAATGAAAACATACATTGAATTTGTTGCAGACAGATTGCTTCTT
GCTCTTGGATGTTCAAAGATTTGGCATCGTGAAAATCCTTTCGATTTTAT
GGAGAACATTTCTTTGGGACGTAAAGCCAACTTCTTCGAAAGTCGTGTAT
CTGACTACCAAAAGTCTGGTGTCATGGAATCACTAAACGATACAGGAAAA
GACCTTCAGTTCGACGAACTAGATGATTTGGATTTCTAAATTTGGCATCG
TGAAAATCCTTTCGATTTTATGGAGAACATTTCTTTGGGACGTAAAGCCA
ACTTCTTCGAAAGTCGTGTATCTGACTACCAAAAGTCTGGTGTCATGGAA
TCACTAAACGATACAGGAAAAGACCTTCAGTTCGACGAACTAGATGATTT
GGATTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:345943..348642 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 985-1155:172 |
| Aaloc | 715-984:738 |
| Aaloc | 403-711:1149 |
| Aaloc | 139-402:1734 |
| Aaloc | 1-138:2701 |
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