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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:457828..461640+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008467 ID=XLOC_008467|Name=XLOC_008467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3813bp|location=Sequence derived from alignment at sc0000124_pilon:457828..461640+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCggaaaagaaagataatttatcatgtgTTTTGTATGGTGCCGGTGA
CATGCGCCTGGTAAGTTACGCTTCGTTTTCGTCTCATTTTTTAAGACAAA
GAAACCATAATTTCTTGGCTTTGCTTTTTCCTTCGAAAAGTGCTCCCTAG
AGTCTCATATCGGAGTCTTTTGCacaatattatcaaaatttgtgACGGTT
AAAAATTCTTTATATGACGTcaacatgaaatttttcaggcaaaactttaa
aacaattctAAAAATTGGCTTAGATATAATCTAACTTAAAATTCGAGTAC
AATGGAAGTACAATCCTTCTTTATAGGAGCAAAGAGGTGTCCCTAAACCC
AAGGATGATGGTATGACTACTTTTGTACATCTATATTCCATACATTGGTC
TATTCAATTAGAAATCCATGCAgggggggggTGGGGTGtacaaacctttt
caagtcaaaataaaattgttggaaatgcgaggataccccctggaaaatgg
cccaaaatatgcaaagaaactcttggaaattttttttgtccactggaaaa
tgaaaaaacactctTTTCGACACTAATTTTTCTCaggttaccccctggaa
atgttcgtccacccccctggtATGGAGATAAAATGCAATGGGCCATTTCA
ACATTCTTATCCTTCATTTATAGAATAAAGGCTTTCTCATATTTGAATGA
TATTTTTATAGAGGTTTTGCTTTCGATGCATTCAGTGGGAATCTGTGGAA
GTGATATCCATTACTACAAACATGGCCGCATTGGAAATTTCGTGGTCAAC
AAACCAATGGTGATGGGACACGAGGCTAGTGGAACTGTTGTAGCCTGTGG
CAAGGATGTCAAACATCTAAAGAAAGGTAATATACTAACAAGACTTGAGA
GAAGAGCTAGGTTCTCTGTTGGTTGAATGTACCTACAAATCACCTAAGAT
ACATGTATAGTCTTATAGTAGAGTTTTGCTACTATTTCGGTTTTTTAAAC
TCTTATCATTTTGATATGCAAGTCATTCACCCCATTCTCTTGTTCATGGT
TTAAATATCGTAGATTCAACTTAGCTAGACCAATATCTGTTTACAACAGT
TTCAACTCTACTAGCAATATATAATCTGCCTTCTTTCAGGAGACCGGGTA
GCAATCGAGCCAGGAGTTCCTTGCAGAAAGTGTATTCGTTGTAAATCAGG
GAGATATAACCTGTGTCCAGATATCTTCTTTTGTGCCACACCACCAGACG
ATGGGAATCTTTGCCGTTTTTACACACACGCTGCTGACTTCTGTTATCGG
TTTGTcatgtttcatttttcactgaaagtACtttttttGGAAGAGTCTCT
TTCTTGGGAAAGAAGGCCAATACCTTGATGTTATAGAACAAACTAGATTA
AATTGCAAATTGATATCTAGAGCTCTGACCATAGTtataaaacccttttt
ttacTGAAGATAAAGCCTTTGCTTTAGGTTTTAACACTTTTATTTAACGA
TCGATCATCATTTTCCTTTGTTGTTGCAGGCTTCCTGATCACGTGACTTT
TGAGGAAGGTGCATTGCTGGAACCCCTATCAGTCGGTATTTATGCATGTC
AACGAGCTTCTGTTACCAATGGTGACAGGATACTTATTTGTGGAGCAGGT
TAGTGCTGTGATTTTATCGCGGGAAAGTTGAATAGCCCTCTACATACAGC
ACCCTCTGTCTTACAGCCCCGTTGGAACTTCTTCACACAATTGGGATGaa
gatttctatcgaaatcccaatttggatagatattctattgttttcagctC
ATAAACTCCAGTGTGATGGTTTTGGAATGCAatttttccattaaatttaA
AATGGGCATGACAATTTTCCAGTTAAGCTGTAACTGTAGGATATATTTCC
CAACGGGGACAAAATTTCGGCCAtctgccaccggggcactggtCCCGCCA
GGTCTGTGGCACAGGGTTGTCATACATGTATGGAAGTTGTTTAAGCTTTT
TGAGTTATTTGAGCTATCATATTCAAGCTTTTTCAATATAAAAGGATTTA
TATGTTACTCTTTATATGATTTTAGGACCAATTGGTTTAGTAACATTATT
GGCGGCAAAATCGTCTGGTGCAAGTGAAGTGGCTATCACAGGTAAAAAAT
TATGCCAACCCCACTGATTGAAGAAATATCGGATAAAATCTTGCACTTAA
ACAAATGAAATTCATTGTTAGTGGTGTTTAATTTCATAACTGTAACGGCT
TTTGCCTTTAGAGGCATTTCGAAGTACAAACTATCTCTGGCCTCATATCT
CTTGCTTCTTGCTACCTCGACTAATAACATGTTCCTTAAGAAACTAAACG
ATTGATTTCAAGTGTATGTTTCTTTTACCCATACCCAATGTTTGTGAAGA
CGGGAACCATCTGGTTATAACTCTGACCATCAATATCAGATTGTAATCAG
CTAAAACTTGTTGCTGATCCTTTCATCCCAATGATGAAATCATCAAACAT
CAAACAATCTCGTCCTTGGGACAAATCCCCTTTAATACTTCAGATCTTGA
CGAAGGACGACTGTCAATGGCAAAACAACTTGGTGCTGATGTTACTATTA
GAATTCAAAGCAAAGATGGTAGAGAAGTAGCGAAACAAATCGAAAGTGTG
TTCGGCGAGAGTGACAAAACAATCGAATGCACTGGAGTAGAGTCGAGCAT
CACTTCCGCTATTCTTGTGAGTAATTGGTGACATCTTGTTAAAAGACAAA
ATCGTATATTCAAAATGAGGTTTCTCTGATATGAGTGAGGTATTTTAATC
AAATAGCCTGTTGTTTAGTCAAGCTTTACAATTTAGACCCGGagaggggg
gtactaggattgcgaGCTGATGGGGGAGTGCCGCTCGACTATTGACCCCt
agacaaagaaaaattttgtgaattttacgatccatattgggacaaatttg
accaaatttcgatctttccgggggtaaaaagttgaaattttcctatttct
ccaaCCCTTAGTGAGACTGAAATAGATAGACCTCTTATTCATGAATCATC
ATTGTAAACCAACttaacattttgaaatataattgaTTTCTTTCATTCAC
TCCAGGCAACACGTTGTGGTGGAACGCTTGTCATCGTGGGGTCTGGGACG
GGTGATTCAACAATCCCATTGAACACGGCACGACGCAAAGAAATTGATAT
TCGTGGTGTTTTCAGATATGCTAATTGGTATGTGGAGGAATCGTTTTTGG
GTTGCTGGATCTAGTTTCCAGACCTTTTTCAATCTAGTAACCAGCAAAGT
CACTTGCacctctttttaattttattaattaatttttacaatcggacttt
tcataaattacgtcaaggACATTACTTGCCTCGCAAACAGTTTCCATGGT
GACTATGTCCTTGAGACACAAAAtgattttatgaatagaaagtagtttta
attaaatccactgggagttaatcaccatggcgataatttcaaaacgaggc
aagtgatgttcgtgacgtaatgaaaaggtctattgcgaGCACTATCAGAA
TCATGGAACTAAGGGACTTGGTTCGAGtttggatattttcttttcCCGCA
AATGTAAACAGATTTTAGCGACCTGATCACTATTTATCTCATCTTTTTAA
TTCTAGTTACCCGGTAGCGTTGAATATGGTAGCCTCAGGACAGATCAACG
TCAAGCTTCTTGTCACGCACCGTTTCGCATTAGAAGATTCCCATGATGCA
TTTCGAACATCAGCTAGCAACAAAGATGGCGCCATCAAAGTAATGATTAA
ATGTAGTAAATAG Coding sequence (CDS) from alignment at sc0000124_pilon:457828..461640+ >XLOC_008467 ID=XLOC_008467|Name=XLOC_008467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2112bp|location=Sequence derived from alignment at sc0000124_pilon:457828..461640+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCggaaaagaaagataatttatcatgtgTTTTGTATGGTGCCGGTGA
CATGCGCCTGATGTCggaaaagaaagataatttatcatgtgTTTTGTATG
GTGCCGGTGACATGCGCCTGGAGCAAAGAGGTGTCCCTAAACCCAAGGAT
GATGGAGCAAAGAGGTGTCCCTAAACCCAAGGATGATGAGGTTTTGCTTT
CGATGCATTCAGTGGGAATCTGTGGAAGTGATATCCATTACTACAAACAT
GGCCGCATTGGAAATTTCGTGGTCAACAAACCAATGGTGATGGGACACGA
GGCTAGTGGAACTGTTGTAGCCTGTGGCAAGGATGTCAAACATCTAAAGA
AAGAGGTTTTGCTTTCGATGCATTCAGTGGGAATCTGTGGAAGTGATATC
CATTACTACAAACATGGCCGCATTGGAAATTTCGTGGTCAACAAACCAAT
GGTGATGGGACACGAGGCTAGTGGAACTGTTGTAGCCTGTGGCAAGGATG
TCAAACATCTAAAGAAAGGAGACCGGGTAGCAATCGAGCCAGGAGTTCCT
TGCAGAAAGTGTATTCGTTGTAAATCAGGGAGATATAACCTGTGTCCAGA
TATCTTCTTTTGTGCCACACCACCAGACGATGGGAATCTTTGCCGTTTTT
ACACACACGCTGCTGACTTCTGTTATCGGAGACCGGGTAGCAATCGAGCC
AGGAGTTCCTTGCAGAAAGTGTATTCGTTGTAAATCAGGGAGATATAACC
TGTGTCCAGATATCTTCTTTTGTGCCACACCACCAGACGATGGGAATCTT
TGCCGTTTTTACACACACGCTGCTGACTTCTGTTATCGGCTTCCTGATCA
CGTGACTTTTGAGGAAGGTGCATTGCTGGAACCCCTATCAGTCGGTATTT
ATGCATGTCAACGAGCTTCTGTTACCAATGGTGACAGGATACTTATTTGT
GGAGCAGGCTTCCTGATCACGTGACTTTTGAGGAAGGTGCATTGCTGGAA
CCCCTATCAGTCGGTATTTATGCATGTCAACGAGCTTCTGTTACCAATGG
TGACAGGATACTTATTTGTGGAGCAGGACCAATTGGTTTAGTAACATTAT
TGGCGGCAAAATCGTCTGGTGCAAGTGAAGTGGCTATCACAGGACCAATT
GGTTTAGTAACATTATTGGCGGCAAAATCGTCTGGTGCAAGTGAAGTGGC
TATCACAGATCTTGACGAAGGACGACTGTCAATGGCAAAACAACTTGGTG
CTGATGTTACTATTAGAATTCAAAGCAAAGATGGTAGAGAAGTAGCGAAA
CAAATCGAAAGTGTGTTCGGCGAGAGTGACAAAACAATCGAATGCACTGG
AGTAGAGTCGAGCATCACTTCCGCTATTCTTATCTTGACGAAGGACGACT
GTCAATGGCAAAACAACTTGGTGCTGATGTTACTATTAGAATTCAAAGCA
AAGATGGTAGAGAAGTAGCGAAACAAATCGAAAGTGTGTTCGGCGAGAGT
GACAAAACAATCGAATGCACTGGAGTAGAGTCGAGCATCACTTCCGCTAT
TCTTGCAACACGTTGTGGTGGAACGCTTGTCATCGTGGGGTCTGGGACGG
GTGATTCAACAATCCCATTGAACACGGCACGACGCAAAGAAATTGATATT
CGTGGTGTTTTCAGATATGCTAATTGGCAACACGTTGTGGTGGAACGCTT
GTCATCGTGGGGTCTGGGACGGGTGATTCAACAATCCCATTGAACACGGC
ACGACGCAAAGAAATTGATATTCGTGGTGTTTTCAGATATGCTAATTGTT
ACCCGGTAGCGTTGAATATGGTAGCCTCAGGACAGATCAACGTCAAGCTT
CTTGTCACGCACCGTTTCGCATTAGAAGATTCCCATGATGCATTTCGAAC
ATCAGCTAGCAACAAAGATGGCGCCATCAAAGTAATGATTAAATGTAGTA
AATAGTTACCCGGTAGCGTTGAATATGGTAGCCTCAGGACAGATCAACGT
CAAGCTTCTTGTCACGCACCGTTTCGCATTAGAAGATTCCCATGATGCAT
TTCGAACATCAGCTAGCAACAAAGATGGCGCCATCAAAGTAATGATTAAA
TGTAGTAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:457828..461640 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 901-1056:3658 |
| Aaloc | 778-897:3106 |
| Aaloc | 607-777:2546 |
| Aaloc | 541-603:2078 |
| Aaloc | 421-537:1531 |
| Aaloc | 262-417:1142 |
| Aaloc | 97-258:714 |
| Aaloc | 61-93:327 |
| Aaloc | 1-60:1 |
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