|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:239305..241985+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008462 ID=XLOC_008462|Name=XLOC_008462|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2681bp|location=Sequence derived from alignment at sc0000124_pilon:239305..241985+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCGGTGGGCTGATCATTCACAAGTATTCCACACAACCCTCTGAGAAGGA
GAGCGAACATTCCCTTTTACAGAACGAAGAGAAGGAGGAAGGTTCTCCTT
ACAGCAGTTTATTCAATAATAGAAATTATTTATTGGTCCTTTTGTCAATG
TCATTGATCGAGCTTTGTTACTTCATCCCATACATTCATTTGGTAAGTCC
AaatcttttttgactttttggaaaaattataatAGCAGCAttttttttCA
CCATTCAACACAGTCTTTTTTGACTTGATATTGATTCTAGCTCCCTAGTC
GACACAGATCGTCGAAACAACATAACATCTAAATAATGCTCTGCTATAGT
CATTAAATGCACATTGATAAATCTCCTTTAAAAATTTCCCAGCTGGTACA
AAACGTAGCTTGTACCACCTTACCCACGGGCGTttcttatattttgaaaa
aagttgcaGTGTGTCGGTCTGTTTTGGTTAGCGAGATTCTGTGTCTCAGT
CTCAAAATCCTAAAAAACACAAGCATAGGGGTgctcttttgaaaattgaa
agataCCATTGCGATAAAAGTAACGTCACTTTAGTTGAGCTAGATTGAAT
GCTAGAAATAGCTATCCTCCACCACAGAGACATACAGTTTTGTGGAAAAA
ATGGTGAAACACGGAATGTTGCCTAACCGTAATAAACCGAACTTTGCGTT
ATCCTTTCAGTTAGCAAAGAAGAGTTTCATAACGTCAATATCacattaaa
tgaacgttgaaacaacttaTATAcgtataccgtattacttcgaataaacg
cccggggcgtttattaaattttttcgattttaggagaggcgtttattcga
aggagggcgtttaaaagaagtaaTACGGCAATCCTTTCTACAGCAAGTCA
TTAAGGAGATTCCCCATAAAAATCTAATCGACAAAACATTTCATACACAT
TCAGGTAAATTATGGTATTCACCATGGCGTATCGTTACTTCAAGCCAGTT
GGTTGCCCGTCATCCTTTCCATTGGTGGTTGGTGTGGAAAGATCATCTTT
GGCATCATTGGTCAAAACAAATACATCAACATCACTTATCTTTTCCAAGT
CTTCCTACTAGCCATGGCTGTTTGTTTGACATTGTTACCCCTAGCAACGA
CATTCAATCAGCTCACCATCTTTTCAGTAGTGTATGGTGTTTTCGATGGT
GGCTTCACCGGCTTCATACTACCCTTAGTTGCGACGACTGTACCTTCTAA
ACATGTCGGCATTGCTGTGGGAACACTTTATTCATCAATCTCCATTGAAT
TACTATTTGGAGCTCCACTGGCAGGTAAGCATGAACTTTCTGtcttctac
acgtttttttttttttaagaaactagttttaccaagcagcctcaatgttt
cttaagaaatcggccttttgagccttaaatgtttcttacatgtttctaaa
ctttttcaagCTTAAAGAACGCATGTCGATAACACAATAGTCTTtctacg
gtactttcctatcttctatattacttttctgactttctcaagtgtttcta
actgttatgtaagtatttttctggAACTTTGCCTTgatgattggaaggtt
ctttaaaaaaccaaattaaaaaatgttattttttcattctaagcctcagc
atgtttcttagatgtttcttagtttttaagcattctgagcctcgtgtttc
ttaaaagtgtgtttctaaaaaaaaaaaaagtgtattagcGGGTATAACTG
CGCTTTCTGTGACGGGAACGAATAGCTCCTGATgtgtctagatcctgact
gactaaGGACGGCGGTTTTACAGGTCGAAACTGCGGTTATTCCAAATCGT
TAAAGTCACCCGTCGTCCTCAAAAAATAAACACGTAAACTCGCTATTACA
TCCAAGAATGACCTCACAGCCTCCTCCTCGAAGCCTTCACCACAGTAACA
AGTGATTCCAGGGGTTCTAGATTGACTAACATTTGATTTCATAGAAATCG
TGTTTGAAATATCgcttttcattgaatttttcagGGTTTCTGTACAACGC
AACCAAATCGTACGCAGTACCTTTCATCCTCTGTGGTGccattttgctga
catcagcggTTATCCTTTTCTGTATCCATGACAACAATTCAAATAAACGG
AACAAAGGGTGTCACCGTACGAATAACGTTGAAAAGAAACAAACGATGGA
AAAAGTGAAGAATTTTctagaacatttcaaattaaatCTTCATCTGGAAC
aattactgatttttttcaaactcgacaatTATGGTGAAACTTCTGAAGAA
CATGAAGAACATAAAACTGTTTTACTGCCGATAGACCATCAACAAAACCT
AAAATCTTCATTAAGCAGACTACCTCTTGATTCTGATGAAGGTACCAAAG
ATACCAATAACAATTCTATAAACTCTGCTCTTCAACACGAAGGAGAGCAG
CTTTCACCAGAAAATGAACAGGCGATCGAGAAAAAACACTCCATCATCGA
GTTTATTAATAATGAACCAACTTGCAGCCTGATACATAAGATGAATGGAG
AAGAGACAAGCTCATTTCATCAATTACAAATTTTTGTAAACAGTTATTTT
TCAATCATAACGCACATGCTAGTGCCCACGAATTGGAGGTTGTCACAAAA
TTTGATGTCCGAAAACTCGACTCCCTGTTGA Coding sequence (CDS) from alignment at sc0000124_pilon:239305..241985+ >XLOC_008462 ID=XLOC_008462|Name=XLOC_008462|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2418bp|location=Sequence derived from alignment at sc0000124_pilon:239305..241985+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCGGTGGGCTGATCATTCACAAGTATTCCACACAACCCTCTGAGAAGGA
GAGCGAACATTCCCTTTTACAGAACGAAGAGAAGGAGGAAGGTTCTCCTT
ACAGCAGTTTATTCAATAATAGAAATTATTTATTGGTCCTTTTGTCAATG
TCATTGATCGAGCTTTGTTACTTCATCCCATACATTCATTTGATCGGTGG
GCTGATCATTCACAAGTATTCCACACAACCCTCTGAGAAGGAGAGCGAAC
ATTCCCTTTTACAGAACGAAGAGAAGGAGGAAGGTTCTCCTTACAGCAGT
TTATTCAATAATAGAAATTATTTATTGGTCCTTTTGTCAATGTCATTGAT
CGAGCTTTGTTACTTCATCCCATACATTCATTTGGTAAATTATGGTATTC
ACCATGGCGTATCGTTACTTCAAGCCAGTTGGTTGCCCGTCATCCTTTCC
ATTGGTGGTTGGTGTGGAAAGATCATCTTTGGCATCATTGGTCAAAACAA
ATACATCAACATCACTTATCTTTTCCAAGTCTTCCTACTAGCCATGGCTG
TTTGTTTGACATTGTTACCCCTAGCAACGACATTCAATCAGCTCACCATC
TTTTCAGTAGTGTATGGTGTTTTCGATGGTGGCTTCACCGGCTTCATACT
ACCCTTAGTTGCGACGACTGTACCTTCTAAACATGTCGGCATTGCTGTGG
GAACACTTTATTCATCAATCTCCATTGAATTACTATTTGGAGCTCCACTG
GCAGGTAAATTATGGTATTCACCATGGCGTATCGTTACTTCAAGCCAGTT
GGTTGCCCGTCATCCTTTCCATTGGTGGTTGGTGTGGAAAGATCATCTTT
GGCATCATTGGTCAAAACAAATACATCAACATCACTTATCTTTTCCAAGT
CTTCCTACTAGCCATGGCTGTTTGTTTGACATTGTTACCCCTAGCAACGA
CATTCAATCAGCTCACCATCTTTTCAGTAGTGTATGGTGTTTTCGATGGT
GGCTTCACCGGCTTCATACTACCCTTAGTTGCGACGACTGTACCTTCTAA
ACATGTCGGCATTGCTGTGGGAACACTTTATTCATCAATCTCCATTGAAT
TACTATTTGGAGCTCCACTGGCAGGGTTTCTGTACAACGCAACCAAATCG
TACGCAGTACCTTTCATCCTCTGTGGTGccattttgctgacatcagcggT
TATCCTTTTCTGTATCCATGACAACAATTCAAATAAACGGAACAAAGGGT
GTCACCGTACGAATAACGTTGAAAAGAAACAAACGATGGAAAAAGTGAAG
AATTTTctagaacatttcaaattaaatCTTCATCTGGAACaattactgat
ttttttcaaactcgacaatTATGGTGAAACTTCTGAAGAACATGAAGAAC
ATAAAACTGTTTTACTGCCGATAGACCATCAACAAAACCTAAAATCTTCA
TTAAGCAGACTACCTCTTGATTCTGATGAAGGTACCAAAGATACCAATAA
CAATTCTATAAACTCTGCTCTTCAACACGAAGGAGAGCAGCTTTCACCAG
AAAATGAACAGGCGATCGAGAAAAAACACTCCATCATCGAGTTTATTAAT
AATGAACCAACTTGCAGCCTGATACATAAGATGAATGGAGAAGAGACAAG
CTCATTTCATCAATTACAAATTTTTGTAAACAGTTATTTTTCAATCATAA
CGCACATGCTAGTGCCCACGAATTGGAGGTTGTCACAAAATTTGATGTCC
GAAAACTCGACTCCCTGTTGAGGTTTCTGTACAACGCAACCAAATCGTAC
GCAGTACCTTTCATCCTCTGTGGTGccattttgctgacatcagcggTTAT
CCTTTTCTGTATCCATGACAACAATTCAAATAAACGGAACAAAGGGTGTC
ACCGTACGAATAACGTTGAAAAGAAACAAACGATGGAAAAAGTGAAGAAT
TTTctagaacatttcaaattaaatCTTCATCTGGAACaattactgatttt
tttcaaactcgacaatTATGGTGAAACTTCTGAAGAACATGAAGAACATA
AAACTGTTTTACTGCCGATAGACCATCAACAAAACCTAAAATCTTCATTA
AGCAGACTACCTCTTGATTCTGATGAAGGTACCAAAGATACCAATAACAA
TTCTATAAACTCTGCTCTTCAACACGAAGGAGAGCAGCTTTCACCAGAAA
ATGAACAGGCGATCGAGAAAAAACACTCCATCATCGAGTTTATTAATAAT
GAACCAACTTGCAGCCTGATACATAAGATGAATGGAGAAGAGACAAGCTC
ATTTCATCAATTACAAATTTTTGTAAACAGTTATTTTTCAATCATAACGC
ACATGCTAGTGCCCACGAATTGGAGGTTGTCACAAAATTTGATGTCCGAA
AACTCGACTCCCTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:239305..241985 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1231-1875:2037 |
| Aaloc | 859-1227:955 |
| Aaloc | 667-858:1 |
|
