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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000671_pilon:45113..48300- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008369 ID=XLOC_008369|Name=XLOC_008369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3188bp|location=Sequence derived from alignment at sc0000671_pilon:45113..48300- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTAAAGTATTTTGCATCATCAATAATTCAATTTGGAATAATCAA
TACGGCCAATGCTCAACTTGACACTCAAATCAGCCACTTGGGTCAAAATG
AGACATGTTTTCGCCCAACACTTGATAATTTTCCTAAAGACTTGTTTTCT
GAGGAAGATCGAATGAAAGGAGCTATAGCTGTGCACTGGGTGGTCGCTAT
TTACATTTTCAGTATTTTATCACTTTTGATACAAGCTTATGTTATTGGTG
CCATCAAAACGATGGCTGATAGTTTTCGTATTGCCAGTGAAGCTGCAAGA
AATACAATGGTAGTGGGTGGACAGCTTTTACCAGAGTTTTTCGCATCCTT
GATTGGGATGTTCGTTTCTAAACAAAACCTTGGTGCTGCAACGGTCATTG
GATCGTGTGCAGCAAACAGCCTATTGACGCTTGGTGTTGTTGGCTTAACC
TTACCGAATCCTGTCAAGTTAAGTTGGTATCCTCTATGGCGAGACAACAT
CTTTTATTTGTTTACTGTTACTGTGTTGCTATGGACAACTTATGACCACG
AGTTGAAGTGGCAAGAGTGTACGTTCTTGGTGCTGTTTTATTTATTGTAT
TTGTTGATCATCAACTTCAACCATAAAGTGGAGCGTGGTGTGAGACGGTT
GGTTTTGATGTACCGAACAGGTGACGATGAAGCAGAAGCTGACCAAGAAA
TCGAAAAGACTCCCATGATCGGTATGAACTTGTCTTACTGTTCTTTCTTG
GATTACATCAACCCCAAACTAATCATTATCTTGATATCAAAATCAATTAA
AGTCTGTCTCAATATAATTTGCAGTGGAGACAAAAAAGGCTATAATTTTT
GATAGAATTTGAATTAATTAGCGGTTTTGTGCTTGTTGAAAAGATAAACA
GGAGTGGAATATTATCAAAAAGAAAAAACTCAAAAAAGATCGGAAAATGA
AGATCGAAATGAAGAAGAAGAAAATCAACTTCTTCAATAATTGTGCTATA
ATTATCATTTTCACACGAGTGATTCTTTGATCTTAGAATATCATTAATGT
GAAAACACTTTTCAAAGAAATTTATTCCATCGAAAGATATAGTCCAAAGT
TTATCAATGATTGACTTCAAAAGCAATTAGCGCCACAAGTGATGTTTCCA
GTCAACACCTACTCCTGCTGTGTCCTTGTTCTTTTAAGTTCAAAGTTTGA
TGAGCAAGTGGGCTATAATACTGGAGTATCGTACCTGCGATATCAATAGA
GAGACTTTCTAAAAGTCTAAAAGATTTTAGTGGCTGATCTTCCAGGATCT
TCTGTGCAGAATATTGAATCCTTAGACTAATTAAAAATCAATTTGGTTCT
ATTTTTTTAAGAGCGTAAAAGGATGTTTGAAAGGCGGAGTTCGAAAGTGG
TTGTCGATCAGACAATCCCTGAAGAAAACTCAGATGATATATCTGGTGAT
CATTTGAATTTGGATATTTCATTGAAGGATGAAGACACATTCAGTCTGCA
CAATGAACACATGGAACATGGTGAGCGCCCTTTTTGAAAGTTTTCGCTTC
CTAGAAAGTTTAGTATGGACATTATATAATAGGGATTAAATTTACTGGAT
TTCTCAGGATGGTATCAGAGTGTCATCCGCGAAATTATGTCTAAATGGAA
ATTTGAACACTAGGATGTTTGTGGAGCAACACTCCAAAAAGTTTAATAAA
ACTTTTAAATGGAAATTTAAAACAGCCTTTGAAAGTTAACTTGAAAAACC
AGCTTGGACTTGGACTAAAAAACACAATATATCTCCCAAGAGTGTAATTT
GCAAGGTCGTATCATTAAAAAGCACTCGAAAATGGGCTATTCCATTTTTA
AACCATACAGGGGTATTGACGAACTTTTCCAGGGGGGGGGGGGCTGAGCC
TTGATTTTACAAGGGGCTTTTGGTCATTTTCAGATTTTCCAAGGGGGTTA
TTAAAGGTTTCCAGGGGTTCTCTCCTCCTAAACTGGCATCAATAGTCACT
TTCCAGGCCCTTTTTCACAAAATTTCACTTTCCAGGGGTGTCAACTCCTA
ATTTCCAGGGGATAGTTTGTTATCCAAAATTTCCAGGGGGGTTAGTGAAG
AAAGTTCGTCAATACAATACCCCTGTACAATTTTTTTTTGGAATAGCCCA
ATGTTTAAAAGTTGAATTTTCTTTAACCCTTCGAGAATCTTGCAGAGGGA
GGCAAAGAGGTCCTAGGATACTGTATCTAGTGATTGTTGAAAATGCTATT
GACGTCAAATTTTGTGCTATGTATTGATAATCCAAGCTTGCAGCCAAAAT
TTCAGCAAAATCAGACAAAGTGGTTATACTAAAAGTGAGCATTTCGGGTA
TAAAATATGGACCAGTCTGTAAAATTGCCACTGCTCAAGTGATTAAATTG
AAAGTTTGCACATTGTCTTACATTGTCAATGTCTATCACTGGTGAAAGTT
TCAAGTCAAAAGCTCCAGTGGTTCCTGCTGGTGTTCAACGTGATTGAATT
ATACAGACCGGTTTGCAAAGTGCCAAATGTTCATGGGAACGAATTTTTTC
TGTTACTACTCTCTTTCATTTAACAAATCAGCCTTCAGGAACAAATTTCA
GTCAAATCAAACAACTCAATCAGTCAATACATGATTTTAGTCAAGTTTAC
TTTCTGGTCTGTAAAATATAAGCCAGACAAGTGGCCGAACAAATTATTAT
CCATATCCCATCAATTATCTATATCTACCACTGGGTTAAAATAGCACTTG
ACAATCTTGGGATTTTTAGGCCCCCTCCTATTAAAAAGATAGGAAGATAC
TCAAAGGGTTAACTCAAATTTTTGATGTTTTTATTTGGGTTTTCCTTATT
TAATAGATGGTATATCACTGTGCACTGAGGATGGTTACATTTCCGCTGGA
GGGTATGGCTATGCGTCAGATGGTGGTTACCTTTCTGAAAGAGGTTATCA
TTCAGAACGTGGGTATGGCAGCATCAACCCAGCCTACCTGTCTGATGCCA
AGGAAGGTTATGCATCGGAAGGAGATTGTCTGGTCAACACCCCTCGACAG
GACTACAGTCAACGTCATGTTTCAAAATTTGCACAACACACTCAGCGAAT
GACCCATCGTCTTAAGAGAAAACTGGTTCAAGGCTCTTATTACACTACCC
TTGATATGGATCAGTATATAGATGGACCTTTATCGCCC Coding sequence (CDS) from alignment at sc0000671_pilon:45113..48300- >XLOC_008369 ID=XLOC_008369|Name=XLOC_008369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2424bp|location=Sequence derived from alignment at sc0000671_pilon:45113..48300- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTTAAAGTATTTTGCATCATCAATAATTCAATTTGGAATAATCAA
TACGGCCAATGCTCAACTTGACACTCAAATCAGCCACTTGGGTCAAAATG
AGACATGTTTTCGCCCAACACTTGATAATTTTCCTAAAGACTTGTTTTCT
GAGGAAGATCGAATGAAAGGAGCTATAGCTGTGCACTGGGTGGTCGCTAT
TTACATTTTCAGTATTTTATCACTTTTGATACAAGCTTATGTTATTGGTG
CCATCAAAACGATGGCTGATAGTTTTCGTATTGCCAGTGAAGCTGCAAGA
AATACAATGGTAGTGGGTGGACAGCTTTTACCAGAGTTTTTCGCATCCTT
GATTGGGATGTTCGTTTCTAAACAAAACCTTGGTGCTGCAACGGTCATTG
GATCGTGTGCAGCAAACAGCCTATTGACGCTTGGTGTTGTTGGCTTAACC
TTACCGAATCCTGTCAAGTTAAGTTGGTATCCTCTATGGCGAGACAACAT
CTTTTATTTGTTTACTGTTACTGTGTTGCTATGGACAACTTATGACCACG
AGTTGAAGTGGCAAGAGTGTACGTTCTTGGTGCTGTTTTATTTATTGTAT
TTGTTGATCATCAACTTCAACCATAAAGTGGAGCGTGGTGTGAGACGGTT
GGTTTTGATGTACCGAACAGGTGACGATGAAGCAGAAGCTGACCAAGAAA
TCGAAAAGACTCCCATGATCGATGAAGTTAAAGTATTTTGCATCATCAAT
AATTCAATTTGGAATAATCAATACGGCCAATGCTCAACTTGACACTCAAA
TCAGCCACTTGGGTCAAAATGAGACATGTTTTCGCCCAACACTTGATAAT
TTTCCTAAAGACTTGTTTTCTGAGGAAGATCGAATGAAAGGAGCTATAGC
TGTGCACTGGGTGGTCGCTATTTACATTTTCAGTATTTTATCACTTTTGA
TACAAGCTTATGTTATTGGTGCCATCAAAACGATGGCTGATAGTTTTCGT
ATTGCCAGTGAAGCTGCAAGAAATACAATGGTAGTGGGTGGACAGCTTTT
ACCAGAGTTTTTCGCATCCTTGATTGGGATGTTCGTTTCTAAACAAAACC
TTGGTGCTGCAACGGTCATTGGATCGTGTGCAGCAAACAGCCTATTGACG
CTTGGTGTTGTTGGCTTAACCTTACCGAATCCTGTCAAGTTAAGTTGGTA
TCCTCTATGGCGAGACAACATCTTTTATTTGTTTACTGTTACTGTGTTGC
TATGGACAACTTATGACCACGAGTTGAAGTGGCAAGAGTGTACGTTCTTG
GTGCTGTTTTATTTATTGTATTTGTTGATCATCAACTTCAACCATAAAGT
GGAGCGTGGTGTGAGACGGTTGGTTTTGATGTACCGAACAGGTGACGATG
AAGCAGAAGCTGACCAAGAAATCGAAAAGACTCCCATGATCGAGCGTAAA
AGGATGTTTGAAAGGCGGAGTTCGAAAGTGGTTGTCGATCAGACAATCCC
TGAAGAAAACTCAGATGATATATCTGGTGATCATTTGAATTTGGATATTT
CATTGAAGGATGAAGACACATTCAGTCTGCACAATGAACACATGGAACAT
GAGCGTAAAAGGATGTTTGAAAGGCGGAGTTCGAAAGTGGTTGTCGATCA
GACAATCCCTGAAGAAAACTCAGATGATATATCTGGTGATCATTTGAATT
TGGATATTTCATTGAAGGATGAAGACACATTCAGTCTGCACAATGAACAC
ATGGAACATGATGGTATATCACTGTGCACTGAGGATGGTTACATTTCCGC
TGGAGGGTATGGCTATGCGTCAGATGGTGGTTACCTTTCTGAAAGAGGTT
ATCATTCAGAACGTGGGTATGGCAGCATCAACCCAGCCTACCTGTCTGAT
GCCAAGGAAGGTTATGCATCGGAAGGAGATTGTCTGGTCAACACCCCTCG
ACAGGACTACAGTCAACGTCATGTTTCAAAATTTGCACAACACACTCAGC
GAATGACCCATCGTCTTAAGAGAAAACTGGTTCAAGGCTCTTATTACACT
ACCCTTGATATGGATCAGTATATAGATGGACCTTTATCGCCCATGGTATA
TCACTGTGCACTGAGGATGGTTACATTTCCGCTGGAGGGTATGGCTATGC
GTCAGATGGTGGTTACCTTTCTGAAAGAGGTTATCATTCAGAACGTGGGT
ATGGCAGCATCAACCCAGCCTACCTGTCTGATGCCAAGGAAGGTTATGCA
TCGGAAGGAGATTGTCTGGTCAACACCCCTCGACAGGACTACAGTCAACG
TCATGTTTCAAAATTTGCACAACACACTCAGCGAATGACCCATCGTCTTA
AGAGAAAACTGGTTCAAGGCTCTTATTACACTACCCTTGATATGGATCAG
TATATAGATGGACCTTTATCGCCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000671_pilon | genome | sc0000671_pilon:45113..48300 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 883-1212:331 |
| Aaloc | 724-879:1826 |
| Aaloc | 1-720:3189 |
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