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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000263_pilon:22166..28554+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008362 ID=XLOC_008362|Name=XLOC_008362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6389bp|location=Sequence derived from alignment at sc0000263_pilon:22166..28554+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCTTACTTCCAATTGCATTCATTTTGTCATCCATGATACAAAATGG
TATTGCAGACGCGAAGCTACCATCAAACATACCTCAACGTAAGGATTGAG
AAGAATAAATGTACTATTAGACACCCCCTCACAGCTCCTCTAGAAACCCT
CTCCACTGGAAAGATTGGCCAAAGTATcgaccccggtggaaaattttact
ctaatttttttcaccgctgaaaataatcagataagccaaTCTTCACCGCA
AAtcattgtgctattttttccatccccactgaattttcttgctCAAAAAT
AATGGATTCCAAATCCCAAGTCATGAGCAAaataattcttatttttttgg
cactttgagcctgaaattgttcttaCTCATAcggtgtaattgaggtattt
taggcgttatacccaTTTCTTGCTAACTTTGATCtataaattgcttgaaa
atgagTAGTTTTAAGCTAGTACTGTTCTtcattaaattgttcttattttt
tggcaattttgagcctcattgtttttataaaattgttcttattaaaaagt
gtaaagggctacatacactacacaatatattgtcaggcaatatattgaca
atatattgctgagtgccgacaatatattgaaaaggtgtctgcaatatatt
gtcagcttcaTTTGCAGTATTCCAATAATATAGGGAgattgtttacaaaa
agaaaattcctttttataatagagcacctATTATTGTCTACTCTGTACAG
GTGGACAGATATGACAATGGCTTAATGCACTCTAGAACAAAATACTCAGA
AACagttttaggcttgaaactcaaaaagttaagaacatttaaagactTAC
AAAAGATTTGgatattctcattaaaaaaCGTGTCTGGCAAGTATCTCGCT
TGTCAAAAGCATTTAATTTAGCGAAACCACGAACAGCACCTCAAAATCAT
GATATAATTATCTGGGTCACTACTGAGAACTACTTCTCTAATACAACTTA
TGAGGACATATATGAAGGCCAAACAAATCTAGAAGCTTTTGCAAGAACAT
TTAGAAGCtgatgaaaatatgaaattcagCATTCCTTCTTCTAAATTGAA
ttttgctttctgatgattttgatggtgctGTGTCCAATAAAGTAGACTAA
AGGATATtgcaatcttgaaatttttcactttcgttttcaaaaattatgca
aaagtataccaaaacaatgaaatatattccaaaaaaccatcaaaGTTTAT
GCGGAAATTatgataaaaacataaaatacctCCTcgatttaaaaatgaaa
tatttaattGATCATGGTTTTCTGCTTGTTTTTGTCCATAAAGGGACTGA
ATCCTCACGCAAAGCCGAAAAATGGACTGCAAATtacaccgggccactta
tcagcgccatccagtctatcaaaaagctataagtggcccGGGGCTACCTG
ATCACCTTGTCTTTTGACATTTAATTTCGATAATgattttcaaagctttt
aatTTGACGTGGAAATCAAAATGAGGGAAAAGCATCGAATATTATTCTAT
ACCTAATTTAGTCAATTAGTTCCAAAATTATAACGTTTTTGAGTTGAATT
TTAAAGAGATGCCATCACGCcatgaaaaaactttcaatcttCGTAACTTT
GGATTTGACCAGCATTCCTTTTAGCTTATAAATTAACTTGCTTTGTACCT
CAATTTGGACCAGAAGTTTATCTTTTTCCAcccctaaggggggggggttt
ctaCCCTTGCCGACCGATGGGAGTTTGCCGCCGAAATTCGAAAACGGACC
Cggatctcttttttttttttaagtgaccctgaatgggactgaacttcaaa
aactttcttaaaattttccatGTCTTTTTTGCAAATTCCCCCAAAAAGGA
ACTCTTCGAAGGGacttaagttttatttttgatgtttttgcggCTCTATC
TTGGACTCATGGAGATGAAAACaggtaccctgaccagtggCACATCCCTT
TTCGCCCAAGTTTCCCCCGGGTCTTCTGCCTGTACCATTTTGGATTTGGA
ATATTCtcagaaaaaatactttttcccAGCCACCAGACGAAGTCATCTGA
CAGAAAATGGGAACAACGAAGCTCAGAATAGATCCTCTAAAATCAACCAT
TTGAAGTACTGTTACATTTTATGAGGAGTCGACCCTACACATAAGAGTTG
TAAAACTAGAAATGTATATACACTTATGCCATTCTTTGCCTTTAAATGAG
CCATACCATTCGTTTTAATAAGTGATGAATTATTTATGAAGTCTTTTATT
CTTCAGGTCTTTACTGCTTCGGATGTTTGGCAACGATCAAAGGTACTGTA
GTTATTTGTATGcattacacccccttcttaaAGATCCGGTAGGATTATTA
CAGCCAGTGTAGAACTTATTAGATATATCTGGTCATGAATTATTAGAATT
TTTCAATCTTGGAATTGAGATTGAGAAATATCATTTTCACTTTAAATTTG
GAATGCTAACTGACCATAGAAGTTTATAGTCAATTCCTGTAAAGTCACAA
AAAGCTGCTTCGTAGAGAATAACAGTTGAATCTATATAAAGTGCTGACCG
TTTGTAAAAATAAAGAGTTCTCTCGAGCGGTTTGCGTCATTTGgcttttt
tttggcaaaaagaggtacatatgtggttgataaaaatattttggtgtgAT
GGTGTTATGCATTTTAAACGAtggtaaaatatttcttttcaatgtAGAAA
CCACGAAGCTTGTAAATAAAAGGCGAATAACGAAAGATAACCGTGCATCG
AAAATTCAAGATATTTTGGAAACAATTTGTGAAGCAAACCGATTTGTTGC
ATACGAATACTCGCCTCCCAAAACTGTCAAAGCTTGTCAACTGCTTTTGG
AAAGACACGAAGAGGAAATTGAGTCAGCTTTGATAAGAGAACAGAAAGAT
TTATCAGAATACGTTTGCAGGACGTTGAGTGGGGCTTGCAATGAAATTGA
TactaaagaggagaagaaacctTCAAAGCACGCTGATATCGATCTGAAAG
AAAACGCCTCTGTTCAAATTGACCCATCTACTGGCAAGATGACACCAAAA
GGTATTACATATACTTCTAGAATAGTCATTCAATGAACGAATCCTTTCTT
AgtaacacccctgtttcagtggCCTAGTAAAGTTCGAAATTCACCGGGCT
TAGATTTGAgattagtcaggtagaattgcataactgcccaggaacatgtc
aggaatcaccaaaaaaaagccccccaggaagatgggaacaccctcaaatc
tataatggcggacatggtactttttctacaaTTAATCAAGGGGGATAAct
catttttaatgattttcaaatgtcaagACAGGGAGATTCCTCTTGATGAG
tatataaagaaaatggggtcacttttgaaatttggaccacgtgGTCCCAA
GATATGACagctaaagtccaaaaaatgacgattttgattACGTTAGCATT
TTTACTAAGAGCAATAATAAATTGGAACATCGACATGCTCatcatgtagc
cctgatcacgggctttcagaaaaatatatggtttaatatgtttagatcag
ccattggcgagatataacgattttaaaatcgtttaaaacgcttatttttg
ctgagtcagcacttttttcgattttaaaatcgttatatCTCGCCAACGGT
TGGTTTAAACATACTCCCTTGATTAATTGTAGAGAAAAGTaccatgtccg
ccattatgaatttgAGGGTGTTTCGATCTTCCTGGGGGTGGGgctttttt
tggtgattcctgacatgttcctggacctACAATcggggacaaaatacttg
gcacaaaagggaaattcaccggggtgttttgaaaccacaatcgatttgta
agtgctctaaagtaggttcgaagggtagagttttaactctgagttttaac
gctagacttaagacttaggaccttaggatctgaggatccaaaagttcaaa
aatggtccagtagggcttgaaatatagcctagaaaccaataaatccctct
tagatcgaaataatcgatgaaatcaagttgagggcctaaaattgacattc
tcgctcgaacctcaattttcgaaaaatggtaaattagccaaaagtgcaaa
aatattatggcacggattgtctcagaaactgaaaaatgccaaattctgct
cagcggggggtctaatttcaagtttcaagcaatttttcgggctcaaaatc
cccctttcgtcaattttaggggctaaaacttgaaaaaaagtcaaaatttt
ctgaaattttcacctttttgacttttcgtaaattgcaccttttcaaaaag
ttaaatatttcacaaaaaattgattctgacctaatgaaaatgcctcaaaa
tggttggaaaagggttattttcacatcaaaggggttttcctctaatttag
acccccgcagagcagaatcgcattttttaattttcaaagacatcgggaca
aaatacttggcacaaaagggaaattcaccggggttttgaaaaccacaatc
gatttgtatgctctaaagtaggttcgaagggtagagttttaactctgagt
tttaacgctagacttaagacttaggaccttaggatctGaggatccaaaag
ttcAAaaatggtccAgtagggcttgaaatatagcctaaaacaataaatcc
ctcccagatcgaaataatcgatgaaatcaagttgagggcctaaaattgac
aattccgctcgaacttcaattttcgaaaaatggtaaattagccaaaaGtg
cAAAAATATTATGGCACGGATTGTATGTGCAAAaTTTCatctctacacca
tttttgtcccggttttagtggtttatgacctaattctacctgaTTAGATC
TCAAAAACTCACTGGAGAGAAGTTTGAGCTCAATTCTCGCTGGTATAGGA
AATAAATCACTTTAAACCGGGTTTGTTCATTGCCCTACCGCTAGACTCTT
TAGCAAtttttttCACCGGTTTATCAAACGGGGTGGGTGTGACCGGCTCA
CTGATACAAAATGCTTAACCATAGGTTCGAAATCATCAGACAATTTGCGC
AAAAGGtttttttCAATCTCTACTTGTttagaaaagaagaaaagtggaaa
aaccatttcaaagaaatcaggaaagaaaaacaagaaaaagacaaccaaga
aatctaagaaagGTATGTTTAACCTCAAATTCGTCCAATTCAATTAGGAT
ATCACCCGAGTAGAGATAACGATAAGTGATCGTGGCACCGTATTCTTTTC
TATACGAGCTTTTGTTCTACCAAGAATATGTCAATAGCTCTTGACGTAAT
TAAAACTTTGGACATGAGATTTTCTGTAAACAGAAAACATGATGAATTAG
AAGAAatagtatatggcccccaaaacggagacggcccccaaaaccgTCAA
GTCAAACAAGATTGGAAATTAACCCCTAAAAACTGGGTAACTCTGGAAAG
TATAAACATATACCAACTACGAACATACCAACTCGttaattcaaagtttt
tcaaaagaattcgaAATATTTCACGATAAAATTAGCATTAGAGACTACTA
GTATTTTGCACGGGATTTTGCACTCAGCCTGGCCTGAAGCATTTATTGTT
TTGGTAtgaatcttttttgcaaaattatcaaaaaactaATTATTTCATCG
TGTCATTAATTTGAGACAGGTTTAAGCTGGTTTAAGTGATGGGTTTTgaa
caatttcaatttaattgaatcgacgttttgggggccactaacctccgttt
tgacaaccatttttatgaagataaagagaaaagtaaattttgacgttttt
aaaGCGTAAAGCATTGCCTTCCAACCTATTGATATTAATTTGATGTCGGT
GCTATGCTTTTTGATTACGATATTTCGAAAAAACCTGCTTTTACGGAGCC
ATTAGAAAAATGTGACtcaactttgactgaaaaaaaaaatcacataaaAA
CCTTCATtctaagaaaattattttttgggaaaGAAATTAGACATGTTGAA
GCTTTATtcacaagaaaaaattttaattttccctattttctgACTTCACT
AGAAACATTTCAATTTGGatagacgttttgggggccagaTACTGTAGTTC
CATTGTATTTTTCAATCGATTCTCTCCTAGATGTAAACCCTCCAAAGGCT
TAAGACACGAGCTAGCTCTTTTTTATATCAGTTCTTTCATAAGATACATT
CCATTCTCTTAAAGATGTGGAGAAAGGAGCATTGCATCATCTCAATGTTG
ACATCAACGATCCTGCTTCCATGGAACGAGTCATGGCccaaatcaaaaaa
ctttccacatctgatcaagaaaaaaaagatgaGCTATAA Coding sequence (CDS) from alignment at sc0000263_pilon:22166..28554+ >XLOC_008362 ID=XLOC_008362|Name=XLOC_008362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0000263_pilon:22166..28554+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCTTACTTCCAATTGCATTCATTTTGTCATCCATGATACAAAATGG
TATTGCAGACGCGAAGCTACCATCAAACATACCTCAACATGTTCTTACTT
CCAATTGCATTCATTTTGTCATCCATGATACAAAATGGTATTGCAGACGC
GAAGCTACCATCAAACATACCTCAACGTCTTTACTGCTTCGGATGTTTGG
CAACGATCAAAGGTCTTTACTGCTTCGGATGTTTGGCAACGATCAAAGAA
ACCACGAAGCTTGTAAATAAAAGGCGAATAACGAAAGATAACCGTGCATC
GAAAATTCAAGATATTTTGGAAACAATTTGTGAAGCAAACCGATTTGTTG
CATACGAATACTCGCCTCCCAAAACTGTCAAAGCTTGTCAACTGCTTTTG
GAAAGACACGAAGAGGAAATTGAGTCAGCTTTGATAAGAGAACAGAAAGA
TTTATCAGAATACGTTTGCAGGACGTTGAGTGGGGCTTGCAATGAAATTG
ATactaaagaggagaagaaacctTCAAAGCACGCTGATATCGATCTGAAA
GAAAACGCCTCTGTTCAAATTGACCCATCTACTGGCAAGATGACACCAAA
AGAAACCACGAAGCTTGTAAATAAAAGGCGAATAACGAAAGATAACCGTG
CATCGAAAATTCAAGATATTTTGGAAACAATTTGTGAAGCAAACCGATTT
GTTGCATACGAATACTCGCCTCCCAAAACTGTCAAAGCTTGTCAACTGCT
TTTGGAAAGACACGAAGAGGAAATTGAGTCAGCTTTGATAAGAGAACAGA
AAGATTTATCAGAATACGTTTGCAGGACGTTGAGTGGGGCTTGCAATGAA
ATTGATactaaagaggagaagaaacctTCAAAGCACGCTGATATCGATCT
GAAAGAAAACGCCTCTGTTCAAATTGACCCATCTACTGGCAAGATGACAC
CAAAAGaaaagaagaaaagtggaaaaaccatttcaaagaaatcaggaaag
aaaaacaagaaaaagacaaccaagaaatctaagaaagaaaagaagaaaag
tggaaaaaccatttcaaagaaatcaggaaagaaaaacaagaaaaagacaa
ccaagaaatctaagaaagATGTGGAGAAAGGAGCATTGCATCATCTCAAT
GTTGACATCAACGATCCTGCTTCCATGGAACGAGTCATGGCccaaatcaa
aaaactttccacatctgatcaagaaaaaaaagatgaGCTATAAATGTGGA
GAAAGGAGCATTGCATCATCTCAATGTTGACATCAACGATCCTGCTTCCA
TGGAACGAGTCATGGCccaaatcaaaaaactttccacatctgatcaagaa
aaaaaagatgaGCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000263_pilon | genome | sc0000263_pilon:22166..28554 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 562-684:6267 |
| Aaloc | 481-558:5134 |
| Aaloc | 127-477:2750 |
| Aaloc | 91-123:2309 |
| Aaloc | 1-87:1 |
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