XLOC_007968 (mRNA) -

Overview
NameXLOC_007968
Unique NameXLOC_007968
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000360_pilon:90754..91854+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007968 ID=XLOC_007968|Name=XLOC_007968|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1101bp|location=Sequence derived from alignment at sc0000360_pilon:90754..91854+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGAGCAAGATGAAGTCTCAGTGGAGGTCCAGATCACACTTTACGC CACAATCGGAGCCGTGTCCCTGGTCTGCAATTCTCTCATTTTCCTGGTCA TTGGAACGAACAAGGACATGCGCACTAAATCTAATTGGTTATTGATTAGT TTGGCGACTACTGATTGGCTAATCATTGTCACCGGAATTCCAATTCATTT GATTAATCTCATCAAGGGTGGAAATCAAACACATGGCATGGTCTGTGATT TATTCGGGTTTTTAATTCTGGTCCCGTTTTTAGTTTCCAATTTTAATTTG ACGCTGATTGCAGTTCACCGTTATGTGTTGGTTGTCCGTAATAAAAGCTA CCGGAAAATATTCACGGACAAGCGGCTCTTTATGAGTATTGCCCTGGTCT GGGGGATCGGAATTCTACTCTCTATTCCACCCTTGCTAGGGTGGGGTAGC TTCTCTTACAACGCCAACCGCGCCCACTGCATGATCGATTGGCAAAAAAG TTTGAGTTACCTTATTGTTCTGCAACTTATGGCTTATCCTGTTCCCATGG CAACAATGTGTTTCTGTTATTACAAAATATTACGTCATAGCTATGAATCA AGTAAAAGACTAGCCTCCAGTGGTGACAAACATCGTATTGCGAAAAAGAA ACGCGAAGTCAGGCTATCTATCATGTTACTCCTAGTTCTGCTTTGTTTCT TCCTATTATTTTTCCCATACGCCATAATGATCATTTACGAAGGACAAATA GGCGGAACGCCCTCGCACACCTTTAGTTTTATCTCAATGTTGGGCGCTTA TTCGAACAGTATGGTTGACTTTTGGATCTACGCAGCAATGAGTACAAAGT TCAGACAAGCATTAAAGAGACTGTTTTATCGTATCGCTGGCAAGCTTGAT TTGTCACCAACAGCAACAGATTCATCATCGGATGCCGGTCATTCTACATC CACTACGAAAGTCAAACACCAACCAGTACCCACGAAACCAACAGAAGGAG CTGAACAAGAGACTTCTATCAATTTATTTTTACCAAGAGGCAAAATTAAT CCTGATAGTGTCGAGGAAAGCTGCGATAGATCTTGTATCGACAAACCTTA A

Coding sequence (CDS) from alignment at sc0000360_pilon:90754..91854+

>XLOC_007968 ID=XLOC_007968|Name=XLOC_007968|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2202bp|location=Sequence derived from alignment at sc0000360_pilon:90754..91854+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGAGCAAGATGAAGTCTCAGTGGAGGTCCAGATCACACTTTACGC
CACAATCGGAGCCGTGTCCCTGGTCTGCAATTCTCTCATTTTCCTGGTCA
TTGGAACGAACAAGGACATGCGCACTAAATCTAATTGGTTATTGATTAGT
TTGGCGACTACTGATTGGCTAATCATTGTCACCGGAATTCCAATTCATTT
GATTAATCTCATCAAGGGTGGAAATCAAACACATGGCATGGTCTGTGATT
TATTCGGGTTTTTAATTCTGGTCCCGTTTTTAGTTTCCAATTTTAATTTG
ACGCTGATTGCAGTTCACCGTTATGTGTTGGTTGTCCGTAATAAAAGCTA
CCGGAAAATATTCACGGACAAGCGGCTCTTTATGAGTATTGCCCTGGTCT
GGGGGATCGGAATTCTACTCTCTATTCCACCCTTGCTAGGGTGGGGTAGC
TTCTCTTACAACGCCAACCGCGCCCACTGCATGATCGATTGGCAAAAAAG
TTTGAGTTACCTTATTGTTCTGCAACTTATGGCTTATCCTGTTCCCATGG
CAACAATGTGTTTCTGTTATTACAAAATATTACGTCATAGCTATGAATCA
AGTAAAAGACTAGCCTCCAGTGGTGACAAACATCGTATTGCGAAAAAGAA
ACGCGAAGTCAGGCTATCTATCATGTTACTCCTAGTTCTGCTTTGTTTCT
TCCTATTATTTTTCCCATACGCCATAATGATCATTTACGAAGGACAAATA
GGCGGAACGCCCTCGCACACCTTTAGTTTTATCTCAATGTTGGGCGCTTA
TTCGAACAGTATGGTTGACTTTTGGATCTACGCAGCAATGAGTACAAAGT
TCAGACAAGCATTAAAGAGACTGTTTTATCGTATCGCTGGCAAGCTTGAT
TTGTCACCAACAGCAACAGATTCATCATCGGATGCCGGTCATTCTACATC
CACTACGAAAGTCAAACACCAACCAGTACCCACGAAACCAACAGAAGGAG
CTGAACAAGAGACTTCTATCAATTTATTTTTACCAAGAGGCAAAATTAAT
CCTGATAGTGTCGAGGAAAGCTGCGATAGATCTTGTATCGACAAACCTTA
AATGGGTGAGCAAGATGAAGTCTCAGTGGAGGTCCAGATCACACTTTACG
CCACAATCGGAGCCGTGTCCCTGGTCTGCAATTCTCTCATTTTCCTGGTC
ATTGGAACGAACAAGGACATGCGCACTAAATCTAATTGGTTATTGATTAG
TTTGGCGACTACTGATTGGCTAATCATTGTCACCGGAATTCCAATTCATT
TGATTAATCTCATCAAGGGTGGAAATCAAACACATGGCATGGTCTGTGAT
TTATTCGGGTTTTTAATTCTGGTCCCGTTTTTAGTTTCCAATTTTAATTT
GACGCTGATTGCAGTTCACCGTTATGTGTTGGTTGTCCGTAATAAAAGCT
ACCGGAAAATATTCACGGACAAGCGGCTCTTTATGAGTATTGCCCTGGTC
TGGGGGATCGGAATTCTACTCTCTATTCCACCCTTGCTAGGGTGGGGTAG
CTTCTCTTACAACGCCAACCGCGCCCACTGCATGATCGATTGGCAAAAAA
GTTTGAGTTACCTTATTGTTCTGCAACTTATGGCTTATCCTGTTCCCATG
GCAACAATGTGTTTCTGTTATTACAAAATATTACGTCATAGCTATGAATC
AAGTAAAAGACTAGCCTCCAGTGGTGACAAACATCGTATTGCGAAAAAGA
AACGCGAAGTCAGGCTATCTATCATGTTACTCCTAGTTCTGCTTTGTTTC
TTCCTATTATTTTTCCCATACGCCATAATGATCATTTACGAAGGACAAAT
AGGCGGAACGCCCTCGCACACCTTTAGTTTTATCTCAATGTTGGGCGCTT
ATTCGAACAGTATGGTTGACTTTTGGATCTACGCAGCAATGAGTACAAAG
TTCAGACAAGCATTAAAGAGACTGTTTTATCGTATCGCTGGCAAGCTTGA
TTTGTCACCAACAGCAACAGATTCATCATCGGATGCCGGTCATTCTACAT
CCACTACGAAAGTCAAACACCAACCAGTACCCACGAAACCAACAGAAGGA
GCTGAACAAGAGACTTCTATCAATTTATTTTTACCAAGAGGCAAAATTAA
TCCTGATAGTGTCGAGGAAAGCTGCGATAGATCTTGTATCGACAAACCTT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_007968XLOC_007968-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000360_pilongenomesc0000360_pilon:90754..91854 +
Properties
Property NameValue
Aaloc1-1101:1