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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000360_pilon:144363..148345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007957 ID=XLOC_007957|Name=XLOC_007957|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3983bp|location=Sequence derived from alignment at sc0000360_pilon:144363..148345- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAACAGTACAAAAACTTCGTTTAAAATGACACAAAGTGGAATATGGCG
AAGGAGTTTGTTCGTATCATGTTTCATCGGACACTGTTTGTATTATGTAA
CCAGAAAATCGTTAACATTTTCAGTTCCCATTCTAATGGAAGATTCCACG
ATGAGGATGACTAAAAGAGATTTTGGTCTGATGGCTAGCCTACAAATGAT
CACGTATTCGATCGGGAAATTCTTAACTGGATTCTTAGTGGATCAATACA
GTAATAAGAAGATTTTTTGTTTCGGATTGTTTTGTTGTGGATTGACTAAT
CTGGCTTTCAGTGCTGTTGGAGAGAAAAATATGTTCTTTTGGATTGTACT
TGCCAATGGATTCTTTCAAGCTTTTGGATGGAATGCTATTGCTGTTCTGG
TCAACCAATGGTACAACAAAGCGGAGGTTTCTCCTAAATTTTATTGTTTT
GATCCCTTTTTAGACCCTGGAGATCCTACAAATTAACCCTTGTCCGTCCC
CGCCCGTTCGTCTGTTACTATCTTTCCAGCTTTTCTATTTTTTTTGCACA
AAGACAGAGGGCAAGGTCTTTAGAAAGTGGCTGAGTATTGTTTTTTTCTA
TTTTCTTATTACATTAGCCTTCAAGTAGGTCCATTCAGCATGCAGATTTT
TCATAAAAGCTCAGTCAGTTCACTATTGGGTATTTTTTGTTGATATCATG
CTGAATGTTTTAAAGTAAGTCTTTGAAAAAGCGGTAAGTAATTTGTATCC
TTATAATGGATCTCAACTTTGATTTCCAAAAACCCACTTTAATTACTTTG
GGAGTGGAATATCTATTTCTCGAACAAAGAATTTCCACCTTATTTCACTT
ACTCATTGATTTACAGTACATAATGAGTTTGAATGGTTTTTTTATAAACG
ATCAGGGTGAAATATTATTTTAATCATCTTGGCAATCGAAATATTATCTT
GAAATTGAATATGCGAAAACTGTAATATAACAAGGGACTTGAAATGCTTT
TATGAATCCCCGAGAGGTACTAGGTTTGTCGGAAGACGGGTGGGTGGGAT
TTTCGAAAATTGTAAATGTTTTGTACAATCCTTAACGGGAATTTGAGAAT
CTAAAAAAGGCTCCCTTAAGAGCAGCATTACTGCGCACTCCGTTTGTCTG
GGGGTACCCCCGGACATAAATCTCTAAAGAGTATCTTTTATGGATTTAGG
ATTTTTATAATAGGGATGAAAATTAATTAGAAGCGTTCGAGTTCTCATCA
TTTTATTTTGTTCTTTACGAATTCCCCAAATAAATGCTAAAAAATATCAA
AGAAAGTTAAAGATTTGTCCAGGACTGTAAATTCAAGTAAAAAACATTCA
CTCGGAGAATTGTAAAAATCCTTTATTTTTATATTCAAAGTCTCAAAATT
TAAAATAAATGGCACTAAAACTTTAGTCCACAGCCTTTAAAGGTTCCAAA
AATCAAAATAATGCTTTAAAAATGAATAAAAATTGCCAAAATATATCGAA
TGTCAAAAATCCTTAAAAGTATCTCAAAATATAAAAAACTTCGTAAACCT
CCCCATCCAGTATTCACCTCTCGTATGCTTTCATAATTTTGACATACCTT
GCTTAAAACCCAACACACCACTAAATGATACATAACTCTTTCCCTTTTCA
TTGCGAGGTTGTTTTACATAACCCGATGAAAAAACATTAATTTGTTTGGC
TTTACGTTTGATGAAATACCACAGTGAATGCCCTAATCCATTGTTACGAT
GTTTTGGGTCCACATACAATGAACCAATTTCACCAGCGTAAGTTAGGGAA
ATCCAACCAACTAACTTGTCGGAATATTTTGTAAAAATACCTGGGAATAA
GCCAAATAACAAACTAATTTTAAGCTGGTCGCTTCGTAAAGTGGGTTCTC
GTCCAAACTGCTCTCTTAAATTCTCTATAACTGACCCATAAAAGTGTTCC
ATTGTAAGTGGCTTTATGTAATAATCGTGATGTACGGAAAAATCCTCCTT
AAAGGTTCTAGATTCAATGATATTTGCGGCAATTCCAAAATAGTAGTTGA
ATACAAATCTGCTGTCTTTCTCTCCTGTAGCCTTCACAAGATCTTCTAAC
ATGTTAGTGACAGTGTATAAAATCCAAGAACCTTTAGTATAAACATCCAA
CATATGTTTCAGATGCAGATCACGTTGCTTGTCATAATCAGCTGACCAAA
ATTGAAACATTTTCTTGCATTTTTTAAATTCGTCTTCAAGACAGATATAG
TCATCATTTGAAATTGTATCCCTACCTTCAAACAGTTTCAATATTTCTCC
TGGTTGAGGATAGGTTAAAGCAATAAAGGTGCTTTCGTCTCCATTTAGAT
TATCAGTGTAAATGTCAACAATCTTTCTGGTCATTGGGCTTGTCAATGTA
CTCATGATAGGGACCAAAAGTTGTTCATTCTTTTCCAAAACTCTACGTCT
CAATTTCTCCTTGTACTCTTGTTGCCGATGTCTTGGTAAATGATCCATGG
TTAGTGTGGTGTAGCTTCTCCTGGTTCTCCTGTATAATAATATTTTACAC
CTAAAACACAACATGTTCAATCTAGAATTATAATTTAACCGTTAACTGAT
TCTCCTGATTAATATTTCCCCTATTCTAACTTATTCAATTCAAATAGTAA
GCAGTTAACATCATGACCAATAAAACTTGCTTAACTCACAAACGAATTCT
TTTTGTGATACAATCCATAAAAAGTGGGCCCCGAATCTAAACGTTATGAA
AAAATGAGAATGATTTTTTGATACCCCTTGTTTATATCCATAGCTAAGAG
ATAATAAACTTATGTCATGTGTGTTGGAATTTCGTGTTCTTGCTTTTTCT
AGTACAAGTGCTACTCATACACTATCTAAACACTTCATATTTTGTTTCTT
GTTATTTCGCCCAAATTTGTTTTTGAAGAGGTTACAAACTGTAATATGAT
GCCACTCTAAATCACCCTTTAATGAATGATGATAATGACAGTTCAATTTA
ATCCTATTTTTGTAAATATAATTAAAATGAGTTCGTCCACTTTAAAAAGC
TACTGCTGTCAAAATCCAAAGTCCAAAGATCTGTCTGTCACCTGGGGGTC
CTTAGGATCAAATATTGGGAGCATCAGGTCTTTGATCAAAACAAACAGAT
TATTCGACAGATCTAAAACAACTGTAACAAACTGTAAACAAAAAAAAAAT
TTCGTGTATCATTTCATTATATGACCATGAGAAATTTTGCATACTGAATC
CTAAATTCCCAGCAATGTGGAAATTAGGGACATATAATAAGAGAAGTCCA
AGCCCACCCTATACCATGTCATAAGATGTTTTTTTGGCTCATCTTTACAG
ATTGGGACCGTCTGGTCGCTCCTCTCTTCCACCATCAATATCGGTACCAG
CATCACTCCATTCATTATCATGGTCATCACCAAAGATCATCATTGGAAAA
CGTGTTTCTTCATCATTGGTAGTATCACCTGTGTTTTTGCCCTCATTGCA
ACAGTAACCATCAAGGAGTACCAAAAACCGCTACCAGGGCTGTCAGACGA
TAAAAATAAACAATCAGGAGTATCTTCCTCGACTAAAGTTGGAAATACAG
CAGATACTAATATCTCCAAAAGCTCAGATTCTTCACAGACAATATCAACA
AAAAATGAAGGCACCGGCTCCACACCAACTTCTTCACCGTTCACTCTTCT
CTTCACCAGTCCGGTGTTTTGGTTGATAAGTAGTTGTTATTTGCTGTGGT
CACTGGTCAAAGTAGGATCTGAAGATTGGTTGCAATTGTATCTGCTGACT
GGCAGATCCTCGTCGCAAACTGAAGGTAGGGAAAGACCGCTCTTTAAGTT
AGTAAGACTGCGACTGCGTCGGAGGCGTCCCGAAGACTCCACTTTCGATG
GCTATCGACCCGAAGGTAGGGAGGGTGGCAGTATTTGTCCCTGGATTACT
CCACTTACCCTTGATCATTCTTTTAATTGCTGA Coding sequence (CDS) from alignment at sc0000360_pilon:144363..148345- >XLOC_007957 ID=XLOC_007957|Name=XLOC_007957|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2118bp|location=Sequence derived from alignment at sc0000360_pilon:144363..148345- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAACAGTACAAAAACTTCGTTTAAAATGACACAAAGTGGAATATGGCG
AAGGAGTTTGTTCGTATCATGTTTCATCGGACACTGTTTGTATTATGTAA
CCAGAAAATCGTTAACATTTTCAGTTCCCATTCTAATGGAAGATTCCACG
ATGAGGATGACTAAAAGAGATTTTGGTCTGATGGCTAGCCTACAAATGAT
CACGTATTCGATCGGGAAATTCTTAACTGGATTCTTAGTGGATCAATACA
GTAATAAGAAGATTTTTTGTTTCGGATTGTTTTGTTGTGGATTGACTAAT
CTGGCTTTCAGTGCTGTTGGAGAGAAAAATATGTTCTTTTGGATTGTACT
TGCCAATGGATTCTTTCAAGCTTTTGGATGGAATGCTATTGCTGTTCTGG
TCAACCAATGGTACAACAAAGCGGAGGAAAACAGTACAAAAACTTCGTTT
AAAATGACACAAAGTGGAATATGGCGAAGGAGTTTGTTCGTATCATGTTT
CATCGGACACTGTTTGTATTATGTAACCAGAAAATCGTTAACATTTTCAG
TTCCCATTCTAATGGAAGATTCCACGATGAGGATGACTAAAAGAGATTTT
GGTCTGATGGCTAGCCTACAAATGATCACGTATTCGATCGGGAAATTCTT
AACTGGATTCTTAGTGGATCAATACAGTAATAAGAAGATTTTTTGTTTCG
GATTGTTTTGTTGTGGATTGACTAATCTGGCTTTCAGTGCTGTTGGAGAG
AAAAATATGTTCTTTTGGATTGTACTTGCCAATGGATTCTTTCAAGCTTT
TGGATGGAATGCTATTGCTGTTCTGGTCAACCAATGGTACAACAAAGCGG
AGATTGGGACCGTCTGGTCGCTCCTCTCTTCCACCATCAATATCGGTACC
AGCATCACTCCATTCATTATCATGGTCATCACCAAAGATCATCATTGGAA
AACGTGTTTCTTCATCATTGGTAGTATCACCTGTGTTTTTGCCCTCATTG
CAACAGTAACCATCAAGGAGTACCAAAAACCGCTACCAGGGCTGTCAGAC
GATAAAAATAAACAATCAGGAGTATCTTCCTCGACTAAAGTTGGAAATAC
AGCAGATACTAATATCTCCAAAAGCTCAGATTCTTCACAGACAATATCAA
CAAAAAATGAAGGCACCGGCTCCACACCAACTTCTTCACCGTTCACTCTT
CTCTTCACCAGTCCGGTGTTTTGGTTGATAAGTAGTTGTTATTTGCTGTG
GTCACTGGTCAAAGTAGGATCTGAAGATTGGTTGCAATTGTATCTGCTGA
CTGGCAGATCCTCGTCGCAAACTGAAGGTAGGGAAAGACCGCTCTTTAAG
TTAGTAAGACTGCGACTGCGTCGGAGGCGTCCCGAAGACTCCACTTTCGA
TGGCTATCGACCCGAAGGTAGGGAGGGTGGCAGTATTTGTCCCTGGATTA
CTCCACTTACCCTTGATCATTCTTTTAATTGCTGAATTGGGACCGTCTGG
TCGCTCCTCTCTTCCACCATCAATATCGGTACCAGCATCACTCCATTCAT
TATCATGGTCATCACCAAAGATCATCATTGGAAAACGTGTTTCTTCATCA
TTGGTAGTATCACCTGTGTTTTTGCCCTCATTGCAACAGTAACCATCAAG
GAGTACCAAAAACCGCTACCAGGGCTGTCAGACGATAAAAATAAACAATC
AGGAGTATCTTCCTCGACTAAAGTTGGAAATACAGCAGATACTAATATCT
CCAAAAGCTCAGATTCTTCACAGACAATATCAACAAAAAATGAAGGCACC
GGCTCCACACCAACTTCTTCACCGTTCACTCTTCTCTTCACCAGTCCGGT
GTTTTGGTTGATAAGTAGTTGTTATTTGCTGTGGTCACTGGTCAAAGTAG
GATCTGAAGATTGGTTGCAATTGTATCTGCTGACTGGCAGATCCTCGTCG
CAAACTGAAGGTAGGGAAAGACCGCTCTTTAAGTTAGTAAGACTGCGACT
GCGTCGGAGGCGTCCCGAAGACTCCACTTTCGATGGCTATCGACCCGAAG
GTAGGGAGGGTGGCAGTATTTGTCCCTGGATTACTCCACTTACCCTTGAT
CATTCTTTTAATTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000360_pilon | genome | sc0000360_pilon:144363..148345 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 781-1077:298 |
| Aaloc | 688-765:376 |
| Aaloc | 427-684:634 |
| Aaloc | 1-426:3984 |
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