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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000360_pilon:96681..101046+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007940 ID=XLOC_007940|Name=XLOC_007940|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4366bp|location=Sequence derived from alignment at sc0000360_pilon:96681..101046+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGatgggaaaaatgaaattcGCTGAGCTGGCACGAAAAGCGAACGCCAG
ACCAATACAAGAAGAACAGGAGACAGCAGAAATTGATCAAGAAGAAAAGA
TCGAAGAAAAACCACGTACTGAAACCTTTGCAGATCTTCCTCCTTTAGAT
GAGAACAAGTATGTTCTGGATGAAGCTTATTTCATACCGATATCCACCAT
CAAAGAAAAGGCTATAAAACCGAAAAAACCGGTCGCCCGAAAAATGTCTG
GATTCACACGGATGGGATCATATAAGAGCGCGCCGTTGAAAACAACCGAC
GAGTCTATTCCTTTAATGGATAGTTGTAGCAGTGATACCAAAAGTACAGG
AGTTTCCAGTGAAGGCAGTAACGAAGCTGTCGAGGAGAAGGAGGGGAAAT
CCCCAGCGAAATCAGGGAATATTTTTGCCAGGAGAAAGATAACTGAAGCA
GCTGATCCGACACAATTAAAGGAAAACCCTTTCCATCGCCGTGGCGTTGT
TATCGATCCATTTCAACAAAATAATATTCGATCAAAATTAAAGACCAGAT
TAAGAAAGATCGTGGACGAAAGATTGACTGTGAAACAGATTTTCTCGAGA
TATGTTGAAAGTTCAACTCTTCACGGATTCTTGTATACTTGTTCAGATAC
TTATATCATAAGGAGATTCTTATGGGCGTGCTTAATGATCTTAGGTGCAA
TATACTTTTTGGTCAAACTAAGAGAAGGTATCATAGAGTACTTCGAATAT
CCGTTCAGCACATTGTCGATCATTGACTTTCCAGATATATTGGAGTTCCC
AACAATCAGTTTCTGTTTAGTCAACGGATACAAACATAAAGAACTCAATG
AGAGTAGATTAGGACCTTTATTACAAAATGGTAGATTTCCTATCCATTCA
AGTTGGTTGGACCCTGGGTACGACATCCCCGGTGATGAACTGGTTGAGGT
GATGAATAATATCTCATTCACACCTTCAGATGTTTTCGAGGAATGCGATT
GGATAAAACGAGACACAGCTCACCCATCGGTGCCACCCAATAAATGCGAC
GCTGCAAATTTCACCACATTCTTCAATAAACAAAACGAGAAATGTTTCAT
GTTGAATTCAAACCAAAAAGGTCACCCTTTATTAAAAGTCAATCACGAAG
GTTTAAAATACGGCTACGAAGGACTTTTTGATATGAGGACTTCGAGCGCC
TTTTTGACACACCCCTTTGCTGGATTGAGGGTGTATATTCATTCTCACCA
CGAACCTGCAGGCTCAGGATCAAGCTTCTTGTTGTCGCCTGGTTTCCATT
ACTACGTCAAGATGGACATGCACGAGGTAAGAATAACGAGTTTATTTCAC
GCATGCATAATGGAAAAGAATAAGACAAGGGGACGATAATTTAAAAATTA
CTTTCCACTTTACAAACTTTTTGAGAACTCCCACCCtgttttctttactt
aaaaacgACTTaaaatggatttttaacgtATTGTACTTATTGGCCCTCTA
ACCTTCTCGAGTATAACTCCAAGTAAAGAAGAACAGTCTTTTTCAGTAGT
GATAAACCTCTGTATCAGTGGCCCAGCATGAATCTCGAGTCATTCTAAAC
CAATGGTTTCCCAATGTGGATAAGATTTCATAGTCTTTTTCCAATACggt
tgttttaatttttcaaaaaggatgATCTTTTGTCCGAAAAATGTCAGAAG
AAGAAACAGATTTTTCGAAACTTTCAAATATATTCATACATCTCTATTTC
CTGATTAAGGTCAATATTAAACAGGATAAAATCTCCCTAAAGATTTCGAG
CTAAGCCTCTAATAAGTTGATCGGAAAAGTCAATAATGGAATGTCTAAGT
CACACAATGTCTATAAAGAGATTAGACGAAAGTAAAAAGCTTCTATTCGT
CAGTACTcattaagaaaatttgaaacgtTCGGTATAGTACCTACCAATAG
AAAAAATTTACATGGGCCAAATTTTCATAATACTCAATTCAAGTCATTTC
AGTGAAAATCCATCGATGGAAAATCCCAACGAAATAGTCCACGTCCTGCT
TATTGTAAAAATCAGCTCGGAAAACCATGTTTcgaatacagtcaactctc
ttaTTCGAACCTCCCTTATTGGAATCTTTCTGTGATCCAAATTAAAAAGT
CAGTTTCTTTCAATTGGAAAGAAGTGGTCTAAATTCCTTTCTGtagttcg
aatctttctgtcCGTCTTCCTTGAAAATCTAATTTGAGAGAGATTCAACA
ACTGCAGTCACTTGTTTTCTTCACTTTTAGACACACAATCTTGAACCTCC
GTACAGTACACAGTGTGGTGAAATccaattaaaatatttcgatACATACA
ATCAGAAAGCATGTTTATTAGAAAAGTTGACGGATTATGTTGGTGAAAAA
TGCGGATGTAGAGAACCATTCATGGCAGGTAAGCGAGGCTTCGATCATCC
TTttctaatgggctattccagaaaaaatttgtacccccttTGTTGAGgtg
gtcattttttaaaaaggtaaccccctggattttttttctcgtttcataga
ctacacgtttttttctttattagaacccagtttataagaacatttaggct
gaaattcgtcgaaaaattaagaacatcgtaagaacatgcccagcctcagt
ttggaaaaaaatgacaagaaactacaattttttcctcttttcaagcagtt
ttaaccaaagttagggatggattttctaaaatcgagagtcaaatattgtc
caaattttatcaACTTTAAGTGCTCTCTATTTTGCATGATGTTGTCGATT
Taaagtagtctgaaaaattaagaacgcatttaagaaaaaaataagcacat
ccaggctcagccaaattttaggtgttctaataaaaaaaaaacgtgtaccc
taAATTTTtgacctcgttttactgacgACCCTGGTTTTCCCACCTCACTT
TACTGACCACCTTGaatttttacactcgaaaaaccagaccattctgaatt
ttttattttccagaccaccctggacgtcacacctcctcaataTAAGGTCA
TAGACTATTTCTCAATGTGTTATGTAAAATACACGTCAATAAAGTTCATG
CTTGACCTTAGTGAAACTTCTGGTTAGTACGATATCCCAATTTCCTCAAC
GCCAACCTCCTTAAGACCTTATAagcactacacgtttttttataagaata
tccaaaatttaggatttgtttttgaagccttagggtTCTTAACTTCGGAG
TTTAAACcctgaaaatgttcgtacataacatgttttcattttcaacactt
tctgagcatttttgtccaatttcctaCAAAATTTCgcaagctttaaaatg
ttctaaagtACATCctgatattttgaccatcgaagccttacgttcttata
tagttttatcttatgaaaaaacgtgtatctgcCCACGTATAACTATTGGA
GTACTCCGTTGAAGGATAATTCCTAGTAAATTAAATGAGTTTGATCCTAA
CTACGTTGACATGATTAAATTTCCTATTTCTTTCTAGAAAACGGTTTGCC
GAGCTGTTCACTAAAACAAACTATTTTATGTAGTTTGTCTGCTAAAGGTA
AATATTTTCTAATCTGATTATTATAGTCCATTTAAGAAATTGCGTAATAC
TGTAAACTGTCTGAAAGATAGCTAAGATTTTCAATATCTTCAAACAGTTG
ACCTGGGGTTTAAAAATTgtttcagttttttaaatttaaactaTAAAACC
GTTCGTTTTGCAAGTTCAAAAGGGAAAGGAAATCTTACTTAAAACTCCTT
GAGCGGACAATCGAGCTCATTAAATCTTTGAGATGACGTATAGCTCCACT
TACTAGCTTCTGCGCCATTGAATCATCGTGTTTCTCTATAGAGTcgacga
aaaataaaaattctaaggttattattttgaaatattattttattctGAAG
CAATAGGCCAACTAATGCTTAGAGaaaaaaaGTTCATAATAATGCTGACC
CTTAGCCGCTAAAGTCCAAAGTACattattcaaataaaaaatcatgttcT
ATCAAATTTCAGAGTAAGATACAGGACTCGGTGAAATCTGTCCTGTAAAA
TATTATCCTCAATTATGATATGAATTCTCTTCTATTTACCAGACTCTTTC
AGTGAGTACAAATTTCGTGAGGGTTGTCCAGTAGACTGCGTACAACATTA
TTATCGATATCAGATCACTGATTCGCGCTTTCTACATAACCCACCAACAG
GAGTTGAAGCTCAAGTGTTGCGAAATGAAAATGCAAGGAAGGGACAAAAT
TCATCACATATGTTGGAACTTGTTGAGGAGCTGTCCCCTGAAGAATTAGC
TCATTATGTTGAGTAA Coding sequence (CDS) from alignment at sc0000360_pilon:96681..101046+ >XLOC_007940 ID=XLOC_007940|Name=XLOC_007940|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3516bp|location=Sequence derived from alignment at sc0000360_pilon:96681..101046+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGatgggaaaaatgaaattcGCTGAGCTGGCACGAAAAGCGAACGCCAG
ACCAATACAAGAAGAACAGGAGACAGCAGAAATTGATCAAGAAGAAAAGA
TCGAAGAAAAACCACGTACTGAAACCTTTGCAGATCTTCCTCCTTTAGAT
GAGAACAAGTATGTTCTGGATGAAGCTTATTTCATACCGATATCCACCAT
CAAAGAAAAGGCTATAAAACCGAAAAAACCGGTCGCCCGAAAAATGTCTG
GATTCACACGGATGGGATCATATAAGAGCGCGCCGTTGAAAACAACCGAC
GAGTCTATTCCTTTAATGGATAGTTGTAGCAGTGATACCAAAAGTACAGG
AGTTTCCAGTGAAGGCAGTAACGAAGCTGTCGAGGAGAAGGAGGGGAAAT
CCCCAGCGAAATCAGGGAATATTTTTGCCAGGAGAAAGATAACTGAAGCA
GCTGATCCGACACAATTAAAGGAAAACCCTTTCCATCGCCGTGGCGTTGT
TATCGATCCATTTCAACAAAATAATATTCGATCAAAATTAAAGACCAGAT
TAAGAAAGATCGTGGACGAAAGATTGACTGTGAAACAGATTTTCTCGAGA
TATGTTGAAAGTTCAACTCTTCACGGATTCTTGTATACTTGTTCAGATAC
TTATATCATAAGGAGATTCTTATGGGCGTGCTTAATGATCTTAGGTGCAA
TATACTTTTTGGTCAAACTAAGAGAAGGTATCATAGAGTACTTCGAATAT
CCGTTCAGCACATTGTCGATCATTGACTTTCCAGATATATTGGAGTTCCC
AACAATCAGTTTCTGTTTAGTCAACGGATACAAACATAAAGAACTCAATG
AGAGTAGATTAGGACCTTTATTACAAAATGGTAGATTTCCTATCCATTCA
AGTTGGTTGGACCCTGGGTACGACATCCCCGGTGATGAACTGGTTGAGGT
GATGAATAATATCTCATTCACACCTTCAGATGTTTTCGAGGAATGCGATT
GGATAAAACGAGACACAGCTCACCCATCGGTGCCACCCAATAAATGCGAC
GCTGCAAATTTCACCACATTCTTCAATAAACAAAACGAGAAATGTTTCAT
GTTGAATTCAAACCAAAAAGGTCACCCTTTATTAAAAGTCAATCACGAAG
GTTTAAAATACGGCTACGAAGGACTTTTTGATATGAGGACTTCGAGCGCC
TTTTTGACACACCCCTTTGCTGGATTGAGGGTGTATATTCATTCTCACCA
CGAACCTGCAGGCTCAGGATCAAGCTTCTTGTTGTCGCCTGGTTTCCATT
ACTACGTCAAGATGGACATGCACGAGATGatgggaaaaatgaaattcGCT
GAGCTGGCACGAAAAGCGAACGCCAGACCAATACAAGAAGAACAGGAGAC
AGCAGAAATTGATCAAGAAGAAAAGATCGAAGAAAAACCACGTACTGAAA
CCTTTGCAGATCTTCCTCCTTTAGATGAGAACAAGTATGTTCTGGATGAA
GCTTATTTCATACCGATATCCACCATCAAAGAAAAGGCTATAAAACCGAA
AAAACCGGTCGCCCGAAAAATGTCTGGATTCACACGGATGGGATCATATA
AGAGCGCGCCGTTGAAAACAACCGACGAGTCTATTCCTTTAATGGATAGT
TGTAGCAGTGATACCAAAAGTACAGGAGTTTCCAGTGAAGGCAGTAACGA
AGCTGTCGAGGAGAAGGAGGGGAAATCCCCAGCGAAATCAGGGAATATTT
TTGCCAGGAGAAAGATAACTGAAGCAGCTGATCCGACACAATTAAAGGAA
AACCCTTTCCATCGCCGTGGCGTTGTTATCGATCCATTTCAACAAAATAA
TATTCGATCAAAATTAAAGACCAGATTAAGAAAGATCGTGGACGAAAGAT
TGACTGTGAAACAGATTTTCTCGAGATATGTTGAAAGTTCAACTCTTCAC
GGATTCTTGTATACTTGTTCAGATACTTATATCATAAGGAGATTCTTATG
GGCGTGCTTAATGATCTTAGGTGCAATATACTTTTTGGTCAAACTAAGAG
AAGGTATCATAGAGTACTTCGAATATCCGTTCAGCACATTGTCGATCATT
GACTTTCCAGATATATTGGAGTTCCCAACAATCAGTTTCTGTTTAGTCAA
CGGATACAAACATAAAGAACTCAATGAGAGTAGATTAGGACCTTTATTAC
AAAATGGTAGATTTCCTATCCATTCAAGTTGGTTGGACCCTGGGTACGAC
ATCCCCGGTGATGAACTGGTTGAGGTGATGAATAATATCTCATTCACACC
TTCAGATGTTTTCGAGGAATGCGATTGGATAAAACGAGACACAGCTCACC
CATCGGTGCCACCCAATAAATGCGACGCTGCAAATTTCACCACATTCTTC
AATAAACAAAACGAGAAATGTTTCATGTTGAATTCAAACCAAAAAGGTCA
CCCTTTATTAAAAGTCAATCACGAAGGTTTAAAATACGGCTACGAAGGAC
TTTTTGATATGAGGACTTCGAGCGCCTTTTTGACACACCCCTTTGCTGGA
TTGAGGGTGTATATTCATTCTCACCACGAACCTGCAGGCTCAGGATCAAG
CTTCTTGTTGTCGCCTGGTTTCCATTACTACGTCAAGATGGACATGCACG
AGACACACAATCTTGAACCTCCGTACAGTACACAGTGTGGTGAAATccaa
ttaaaatatttcgatACATACAATCAGAAAGCATGTTTATTAGAAAAGTT
GACGGATTATGTTGGTGAAAAATGCGGATGTAGAGAACCATTCATGGCAG
ACACACAATCTTGAACCTCCGTACAGTACACAGTGTGGTGAAATccaatt
aaaatatttcgatACATACAATCAGAAAGCATGTTTATTAGAAAAGTTGA
CGGATTATGTTGGTGAAAAATGCGGATGTAGAGAACCATTCATGGCAGAA
AACGGTTTGCCGAGCTGTTCACTAAAACAAACTATTTTATGTAGTTTGTC
TGCTAAAGAAAACGGTTTGCCGAGCTGTTCACTAAAACAAACTATTTTAT
GTAGTTTGTCTGCTAAAGACTCTTTCAGTGAGTACAAATTTCGTGAGGGT
TGTCCAGTAGACTGCGTACAACATTATTATCGATATCAGATCACTGATTC
GCGCTTTCTACATAACCCACCAACAGGAGTTGAAGCTCAAGTGTTGCGAA
ATGAAAATGCAAGGAAGGGACAAAATTCATCACATATGTTGGAACTTGTT
GAGGAGCTGTCCCCTGAAGAATTAGCTCATTATGTTGAGTAAACTCTTTC
AGTGAGTACAAATTTCGTGAGGGTTGTCCAGTAGACTGCGTACAACATTA
TTATCGATATCAGATCACTGATTCGCGCTTTCTACATAACCCACCAACAG
GAGTTGAAGCTCAAGTGTTGCGAAATGAAAATGCAAGGAAGGGACAAAAT
TCATCACATATGTTGGAACTTGTTGAGGAGCTGTCCCCTGAAGAATTAGC
TCATTATGTTGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000360_pilon | genome | sc0000360_pilon:96681..101046 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1537-1758:4145 |
| Aaloc | 1477-1533:3540 |
| Aaloc | 1327-1473:2281 |
| Aaloc | 1-1326:1 |
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