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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000360_pilon:64193..70392+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007938 ID=XLOC_007938|Name=XLOC_007938|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6200bp|location=Sequence derived from alignment at sc0000360_pilon:64193..70392+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTGGTTAACTATATGTTTAGTTGCTGTGACGTACGTCATAGTGGC
TAAATCGCAAGGTAGGACTCTTAGACGATTCTTTCGTCCGTTGGATGGAG
AGTATTCGCGGAGAAATATACATATGTACGGAGCTTATAGCCGTAATGGG
CGGCAGTAGAAGCTTGAAACATAGTAAAAACATCCATCACTTCTTACTCC
GACCCGGTCTTCCCTTGCTTTCCGAATTCTTTCCACTTCCTTGACTTAAT
GGTTTTTATTTCTAAGGCCCTCAATATGTGATTAAGAGACTGTTTAGTAA
TCAACGAAAAGACGATTTCATCTATATTCCCCCTCTATTGACAATTGGAG
CAAAAGAGGTCACGCAACACTCTCAAATACAATCAAAAGCGACAAGATTT
CATTTCTAGATTGAATTTTAATAGATGATTAAGGAGTCTTTCttaaacat
ttttggaaacGTTTTCCGAATTTATCGTCAgctttgaaaattgactttta
atGTAACtgattttagtgaaaaagtctCAATTTCAAAAGGCAACTATTTT
GACAATAGATCTTTCGTTCCACCTACAGTATGCAATGACTCGAGCAGAAG
ATGTGTATATTGGTCACGTTACTGTAGAACAAGCACATATGTTACACTAC
AATGTAGAAGGAAGTGTGGACGGTGCCTTATCCCTCGCCCAAGACCAGTC
TGTAAAGTACCTTGGACGCATTGGACGAGAACAATCGAAATAGTTGTTTG
TACAGGCCCAACTtaccctaaaaatcaaaaattcaaaatcaatcaCTTTC
CTCAATCACTTCTTTGTTCGAATTTCTATCCGGTTGAAATTTTACCCTTG
TTTCTATTCTTTTCtcccttaccttatttttgAGTAAATTCATACGTAAA
ATAACAAAACTCTTTCAGGGGAAGAAGTCAATTTGAGCAGATTTGAGATA
TATTTTGGCAAAAAGAGGCAAATCTTTTACAGTCGAAATTTCTCCTTATC
TACTTAACATGGACCCCCGTCCGATAAAACATCTGTCACGTGCAGAATTA
AACAGCTATAATAACATTTTTGAGTCGTTTTAGGGATATTTTTGGGTTTA
TTTCCTTTATATCCGCCAGTTCCATCTAGAAGATGTTTCGATATTGACCG
TCGTTGTGTGTACTGGAGGAATCACGGCTATTGTCGAAGATATTATTATC
AAAATCGATGTCAAAAAACTTGTGGTGTATGTAGAGGtaagaattttttc
attgcaaaaAGAATGTTTCAATGATTGTGATTAGAATATAGTTCTGGGAT
AATGCAAAGTACAAGATCTCAATGCAATAGATACATGTGTTATCAAGCTA
ATGCCTTTACGTTTAACTGGCCTAACTTAAGAGAGTTTTCAGGCTTATAC
AACAAGATTCAACCATCATTTAGTTGACAGCATCAGAAGAGAGGAAAGAA
GAATAAAGATAGCTAAATAGACATAGTCATAACATCGGGTACAGACCCAC
AAATAATATAAATCTGTACTAAGCCGTCAGAAGATGACAACAATATAAAC
ATAAAGATATGCAATAAATTATGGGTAGCGACTTGCTTCATATCGACTTA
AGATCGTATTGACTAAAATTAATTAAACTACTTTTGTCTCTATCATTAGC
ACTTCCAACGACAAGAGTATGCGTGGACAGAGACTCGAGATGTCCTTTTT
GGGCAAGACGCTATCAATGTTTCCTCAATTCAAGATATATGAATCGGAAT
TGTAAAAAATCTTGTGGAAAATGTCCTAAACGTAACGACTACAACATAct
atgttggacggtgaaaaagaatgcggctattatattttgatttttcccga
catgtttcggactcggtccgttctcaagggaatgatatttctatataaaa
aaaagtgtttctatacaaaattatttgacgtcaaattggacaaatacgtc
attttaggcgatttcggCTTGAAAATGGGTTGGTGTAAATGGGGCCATCT
GATAAGTTGAATTCGGTCTAAACGACTACAACATactacatacatacata
cataactTCATCCCTCTCAACATACTATTACCATTTAAACTATGAATCAG
TGCCCTTTTTTGAGTATTCGTCTGCAATCGAGGAAAAAGTGAAAACGTTG
GgtgtaaattttgaatatttagtgTACAATCTTTTCGCCATTTTCTTAAG
TCATTCGATCTGGGTAAAATTATAGAGATCAGCACCTTTTCTATTTCATA
Gcaaaaccaaaaccaaagccaaggccaagaacaacaaagacaacgacaac
cacaacaaccacaaccacaTCTACGACCACTTCAAGTAGAAAAAATCCAC
TTATCCCAAAGCGTACCTCGAGGGAACCTTGCCCTTGTTGTAGATGCTCA
AAATAATAGTAATAGAACAGAACGATAACAGTAATAGAACTAGCCGTCAT
CCGGGTCGCACCCGTCGATTAGAGTGTGCCTTACGCATGACAAAGCCCTT
AGGATGGTGGGTAGGGTGTTTTAGGGATTTATTCAAACTCTAAGAACGAA
AAATTACCACTTAAAATCGATCGAAATTCAACAAGTGAAATAAGAAAACA
AAGAGAAACAAACGAGTACAACAAAAATTTTAGGAATGAATTTCACAAAG
ACGAccatcaaaatcaacaaaatcaacttTGTTTCGCTCATTTTCAGCTG
ATCCACCACCACCTGTTCCAGAAGTTACAAAACCTCCAACTCCAAGAGTT
ACAAGTAAGTCGATATCTGAATCTTAGAAATCCCTAAAAATATTAGTCAG
CGAATCAATCTTAAACataacaaatctcttttgacttTAGCTGATGGAAT
CCCGCTACCTGTTCCAGAAGTTACAAAACCTCCAACTCCAAAAGTTACAA
GTAAGTTAATATCTGAATCTTGGAAGTAACCCAAAATATTAATCAGAGGA
TCAGTCTTAAACataacaaatctcttttgacttTAGCTGATGGAATCCCG
CCGCCTGTTCCAGAAGTGACAAAACCTCCAACCTCAAAAGTTACAAGTAC
CATAAGTCAATATCTGAATCTTGGAAATCCTCCAAAATATAAAAGAGAGG
ATCAATCTTAAACataacaaatctcttttgacttTAGCTGATGGAATCCC
GCCACCTGTTCCAGAAGTTACAAAACCTCCAACTCCAAAAGTTACAAGTA
AGTTAATATCTGAATCTTAAAAGTAACCCAAAATATTAATCAGAGGATCA
ATCTTAAACATAACAAATCTCTTTTAACTTTAGCTGATGGAATCCCGCCA
CCTGTTCCAGAAGTTACAAAACCTccaactcaaaaagttaaaagtaagtC
AATATCTGAATCTTGGAAATCCctcaaaatataaaagagaGGATCAATCT
TAAACataacaaatctcttttgacttTAGCTGATGTAATCCCGCCGCCTG
TTCCAGAAGTGACAAAACCTCCAACCTCAAAAGTTACAAGTAAGTCAATA
TCTGAATCTTGGAAATCCctcaaaatataaaagagaGGATCAATCTTAAA
CataacaaatctcttttgacttTAGCTGATGGAATCCCGCCACCTGTTCC
AGAAGTTACAAAACCTCCAACTCCAAAAGTTAAAAGTAAGTCAATATCTG
AATCTTAGAAATCCCTCAAAATATAAAACAGAGGATCAATCTTAAACata
acaaatctcttttgacttTAGCTGATGGAATCCCACCACCTGTTCCAGAA
GTGACAAAACCTCCAACTCCAAAAGTTACAAGTAATTCAATATCTGAATC
TTAGAAGTAACCCAAAATATTAATCAGAGAATAAATTTTAAACCAAAAGA
ATTCTTTTGACTTTAGCTGATGGAATCCCACCACCTGTTCCAGAAGTTAC
AAAACCTCCAACTCCAAGAGTTACAAGTAAGTCGATATCTGAATCTTAGA
AATCCCTAAAAATATTAGTCAGCGAATCAATCTTAAACATAACAAATTTC
TTTTGACTTTAGCTGATGTAATCCCGCCACCTGTTCCAGAAGTGACAAAA
CCTCCAacttcaaaagttaaaagtaaGTCAATATCTGAATCTTAGAAACC
GCTCAAAATATAAAACAGAGGATCAATCTTAAACataacaaatctctttt
gacttTAGCTGATGGAATCCCGCCACCTGTTCCAGAAGTTACAAAACCTc
caactcaaaaagttaaaagtaagtCAATATCTGAATCTTGGAAATCCctc
aaaatataaaagagaGGATCAATCTTAAACataacaaatctcttttgact
tTAGCTGATGTAATCCCGCCGCCTGTTCCAGAAGTGACAAAACCTCCAAC
CTCAAAAGTTACAAGTAAGTCAATATCTGAATCTTGGAAATCCctcaaaa
tataaaagagaGGATCAATCTTAAACataacaaatctcttttgacttTAG
CTGATGGAATCCCGCCACCTCTTCCAGAAGTTACAAAACCTCCAACTCCA
AAAGTTAAAAGTAAGTCAATATCTGAATCTTAGAAATCCCTCAAAATATA
AAACAGAGGATCAATCTTAAACataacaaatctcttttgacttTAGCTGA
TGGAATCCCACCACCTGTTCCAGAAGTGACAAAACCTCCAACTCCAAAAG
TTACAAGTAATTCAATATCTGAATCTTAGAAGTAACCCAAAATATTAATC
AGAGAATAAATTTTAAACCAAAAGAATTCTTTTGACTTTAGCTGATGGAA
TCCCGCCGCCTGTTCCAGAAGTTACAAAACCTCCAACTCCAAAAGTTAAA
AGTAAGTTAATATCTGAATCTTAGAAGTAACCCAAAATATTAAACAGAGG
ATCAGTCTTAAACataacaaatctcttttgacttTAGCTGATGGAATCCC
GCCGCCTGTTCCAGAAGTTACAAAACCTCCAACTTCAAAAGTTACAAGTG
AGTCAATATCTGAATCTTAGAAATCCATAAAAATATTAAACAGAGGATCA
GTCTTAAACataacaaatctcttttgacttTAGCTGATGGAATCCCGCCG
CCTGTTTCAGAAGTTACAAAACctccaatttcaaaatttacaagTGAGTC
AATATCTGAATCTTAGAAGTAACCCAAAATATTAAACAGAGGATCAATCT
TAAACataacaaatctcttttgacttTAGCTGATGGAATACCGCCGCCTG
TTCCAGAAGTTACAAAACCTCCAACTTCAAAAGTTACAAGTGAGTCAATA
TCTGAATCTTAGAAGTAACCCAAAATATTAAACAGAGGATCAATCTTAAA
CataacaaatctcttttgacttTAGCTGATGGAATCTCGCCGCCTGTTCC
AGAAGTTACAAAACCTCCAACTTCAAAAGTTACAAGTGAGTCAATATCTG
AATCTTAGAAATCCCTAAAAATATTAAACAGAGGATCAGTCTTAAACata
acaaatctcttttgacttTAGCTGATGGAACCCCGCCGCCTGTTCCAGAG
GTGACAAAACCTCCGACTCCGAAAGTTACAAGTAAGTTAAAAGGGACATA
CCAATGATCTCAGCGTATCTGTTTTCTTAATATTCACCATAACCTGTGAA
GAATTGACCTGATATTACAACACTATTACTATTTCACTTTCAGCTGAAGA
ATTACCCATCATTCCACCAATACCGCCAATACCTCCAATACCACCAATCC
CACCAATCCCAGCGAATCCTATGAAATGCCGTAAACAGGTCagaaaaaca
cttttgtttgttttacttACTTAGAGAGCGTTCTAGTTCACAATCGTTCT
AAACATTCTTTCGACAGCAACGGTATTAGTAagtttcaattaaaaaaaag
ttcgttCCTAAAGTCTGTCACAAAGCTTTCTGAAAACTTTACATGGTCTA
TTTACGAGCTATATTAAAAAGCCCACATACCTTTATGTTGGAAGTTCTGA
AGCAAGGGAGCTTTAGAGATCTCAAATCAGACCCGCTGAAATTTTTCATA
GCTACCCCAGCGGAATTCTAAACTTCCCCGGGGAACTGAGACAGTGAGAC
AAGGGTTGTCTTTATACTTTTGAAGGACAAAGCAATTGTCAGTGGTGTGT
CTTTACCTTCTTCCTTTTATAGCCCAACGGCAAGCTCGTTTGTAAAGGAA
CATCACGCGTAATTTACAGAGGTGAAAACGATGAagcgaaaaagaattga
Coding sequence (CDS) from alignment at sc0000360_pilon:64193..70392+ >XLOC_007938 ID=XLOC_007938|Name=XLOC_007938|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1974bp|location=Sequence derived from alignment at sc0000360_pilon:64193..70392+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTGGTTAACTATATGTTTAGTTGCTGTGACGTACGTCATAGTGGC
TAAATCGCAAGATGAATTGGTTAACTATATGTTTAGTTGCTGTGACGTAC
GTCATAGTGGCTAAATCGCAAGTATGCAATGACTCGAGCAGAAGATGTGT
ATATTGGTCACGTTACTGTAGAACAAGCACATATGTTACACTACAATGTA
GAAGGAAGTGTGGACGGTGCCTTATCCCTCGCCCAAGACCAGTCTTATGC
AATGACTCGAGCAGAAGATGTGTATATTGGTCACGTTACTGTAGAACAAG
CACATATGTTACACTACAATGTAGAAGGAAGTGTGGACGGTGCCTTATCC
CTCGCCCAAGACCAGTCTTTCCATCTAGAAGATGTTTCGATATTGACCGT
CGTTGTGTGTACTGGAGGAATCACGGCTATTGTCGAAGATATTATTATCA
AAATCGATGTCAAAAAACTTGTGGTGTATGTAGAGTTCCATCTAGAAGAT
GTTTCGATATTGACCGTCGTTGTGTGTACTGGAGGAATCACGGCTATTGT
CGAAGATATTATTATCAAAATCGATGTCAAAAAACTTGTGGTGTATGTAG
AGCACTTCCAACGACAAGAGTATGCGTGGACAGAGACTCGAGATGTCCTT
TTTGGGCAAGACGCTATCAATGTTTCCTCAATTCAAGATATATGAATCGG
AATTGTAAAAAATCTTGTGGAAAATGTCCTAAACCACTTCCAACGACAAG
AGTATGCGTGGACAGAGACTCGAGATGTCCTTTTTGGGCAAGACGCTATC
AATGTTTCCTCAATTCAAGATATATGAATCGGAATTGTAAAAAATCTTGT
GGAAAATGTCCTAAACcaaaaccaaaaccaaagccaaggccaagaacaac
aaagacaacgacaaccacaacaaccacaaccacaTCTACGACCACTTCAA
caaaaccaaaaccaaagccaaggccaagaacaacaaagacaacgacaacc
acaacaaccacaaccacaTCTACGACCACTTCAACTGATCCACCACCACC
TGTTCCAGAAGTTACAAAACCTCCAACTCCAAGAGTTACAACTGATCCAC
CACCACCTGTTCCAGAAGTTACAAAACCTCCAACTCCAAGAGTTACAACT
GATGGAATCCCGCCACCTGTTCCAGAAGTTACAAAACCTCCAACTCCAAA
AGTTAAAACTGATGGAATCCCGCCACCTGTTCCAGAAGTTACAAAACCTC
CAACTCCAAAAGTTAAAACTGATGGAATCCCGCCGCCTGTTCCAGAAGTT
ACAAAACCTCCAACTCCAAAAGTTAAAACTGATGGAATCCCGCCGCCTGT
TCCAGAAGTTACAAAACCTCCAACTCCAAAAGTTAAAACTGATGGAATCC
CGCCGCCTGTTCCAGAAGTTACAAAACCTCCAACTTCAAAAGTTACAACT
GATGGAATCCCGCCGCCTGTTCCAGAAGTTACAAAACCTCCAACTTCAAA
AGTTACAACTGATGGAATACCGCCGCCTGTTCCAGAAGTTACAAAACCTC
CAACTTCAAAAGTTACAACTGATGGAATACCGCCGCCTGTTCCAGAAGTT
ACAAAACCTCCAACTTCAAAAGTTACAACTGAAGAATTACCCATCATTCC
ACCAATACCGCCAATACCTCCAATACCACCAATCCCACCAATCCCAGCGA
ATCCTATGAAATGCCGTAAACAGCTGAAGAATTACCCATCATTCCACCAA
TACCGCCAATACCTCCAATACCACCAATCCCACCAATCCCAGCGAATCCT
ATGAAATGCCGTAAACAGCCCAACGGCAAGCTCGTTTGTAAAGGAACATC
ACGCGTAATTTACAGAGGTGAAAACGATGAagcgaaaaagaattgaCCCA
ACGGCAAGCTCGTTTGTAAAGGAACATCACGCGTAATTTACAGAGGTGAA
AACGATGAagcgaaaaagaattga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000360_pilon | genome | sc0000360_pilon:64193..70392 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 910-987:6123 |
| Aaloc | 817-909:5646 |
| Aaloc | 757-813:5182 |
| Aaloc | 697-753:4890 |
| Aaloc | 637-693:4744 |
| Aaloc | 577-633:3578 |
| Aaloc | 520-573:2700 |
| Aaloc | 436-516:2254 |
| Aaloc | 304-432:1652 |
| Aaloc | 187-300:1122 |
| Aaloc | 64-183:581 |
| Aaloc | 1-60:1 |
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